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List of works by Katsuhiko Shirahige

A chromatin integration labelling method enables epigenomic profiling with lower input

scientific article published on 10 December 2018

Aging of spermatogonial stem cells by Jnk-mediated glycolysis activation

scientific article published on 29 July 2019

Assembly of Slx4 signaling complexes behind DNA replication forks

scientific article

Attaching Accessory Devices to the Replisome

scientific article published on 01 August 2016

Budding yeast Rif1 binds to replication origins and protects DNA at blocked replication forks

scientific article published on 13 August 2018

ChIP-seq Analysis of Condensin Complex in Cultured Mammalian Cells.

scientific article published in January 2017

Chromosome-associated RNA-protein complexes promote pairing of homologous chromosomes during meiosis in Schizosaccharomyces pombe

scientific article published on 06 December 2019

Cohesin Ubiquitylation and Mobilization Facilitate Stalled Replication Fork Dynamics

scientific article published on 8 November 2017

Cohesin-dependent chromosome loop extrusion is limited by transcription and stalled replication forks

scientific article published on 10 June 2022

Comprehensive epigenome characterization reveals diverse transcriptional regulation across human vascular endothelial cells

scientific article published on 19 December 2019

Condensin Relocalization from Centromeres to Chromosome Arms Promotes Top2 Recruitment during Anaphase.

scientific article published on 9 December 2015

Condensin targets and reduces unwound DNA structures associated with transcription in mitotic chromosome condensation

scientific article published on 23 July 2015

Cux2 refines the forelimb field by controlling expression of and genes

article

DNMT3A R882 mutants interact with polycomb proteins to block haematopoietic stem and leukaemic cell differentiation.

scientific article published on 24 March 2016

Design, synthesis, and biological activity of NCC149 derivatives as histone deacetylase 8-selective inhibitors.

scientific article published on 8 January 2014

Esco1 Acetylates Cohesin via a Mechanism Different from That of Esco2.

scientific article published on 4 June 2015

Functional annotation of chemical libraries across diverse biological processes.

scientific article published on 24 July 2017

Genome-organizing factors Top2 and Hmo1 prevent chromosome fragility at sites of S phase transcription.

scientific article

Germline gain-of-function mutations in AFF4 cause a developmental syndrome functionally linking the super elongation complex and cohesin

scientific article

Histone variants enriched in oocytes enhance reprogramming to induced pluripotent stem cells

scientific journal article

Identification of Elg1 interaction partners and effects on post-replication chromatin re-formation

scientific article published on 12 November 2018

Inferring the choreography of parental genomes during fertilization from ultralarge-scale whole-transcriptome analysis

scientific article published on December 2013

Involvement of a chromatin remodeling complex in damage tolerance during DNA replication

scientific article

MRG15-mediated tethering of PALB2 to unperturbed chromatin protects active genes from genotoxic stress.

scientific article published on 3 July 2017

MYU, a Target lncRNA for Wnt/c-Myc Signaling, Mediates Induction of CDK6 to Promote Cell Cycle Progression.

scientific article published on 24 August 2016

Missense Mutations in NKAP Cause a Disorder of Transcriptional Regulation Characterized by Marfanoid Habitus and Cognitive Impairment

scientific article published on 03 October 2019

Physical Association of Saccharomyces cerevisiae Polo-like Kinase Cdc5 with Chromosomal Cohesin Facilitates DNA Damage Response.

scientific article

Pioneer Factor NeuroD1 Rearranges Transcriptional and Epigenetic Profiles to Execute Microglia-Neuron Conversion

scientific article published on 09 January 2019

Postreplicative recruitment of cohesin to double-strand breaks is required for DNA repair.

scientific article

Re-evaluating the Localization of Sperm-Retained Histones Revealed the Modification-Dependent Accumulation in Specific Genome Regions

scientific article published on 01 June 2018

Recent advances in ChIP-seq analysis: from quality management to whole-genome annotation

scientific article published on 15 March 2016

Replication-Coupled PCNA Unloading by the Elg1 Complex Occurs Genome-wide and Requires Okazaki Fragment Ligation.

scientific article published on 23 July 2015

Rif1 binds to G quadruplexes and suppresses replication over long distances.

scientific article published on 5 October 2015

Smc5/6-mediated regulation of replication progression contributes to chromosome assembly during mitosis in human cells.

scientific article

Spo11-accessory proteins link double-strand break sites to the chromosome axis in early meiotic recombination

scientific article published on 01 August 2011

Temporal Regulation of ESCO2 Degradation by the MCM Complex, the CUL4-DDB1-VPRBP Complex, and the Anaphase-Promoting Complex

scientific article published on 09 August 2018

The Deubiquitinating Enzyme USP7 Regulates Androgen Receptor Activity by Modulating Its Binding to Chromatin.

scientific article

The HSF1-PARP13-PARP1 complex facilitates DNA repair and promotes mammary tumorigenesis.

scientific article published on 21 November 2017

The chromosomal association of the Smc5/6 complex depends on cohesion and predicts the level of sister chromatid entanglement.

scientific article

The cyclic gene Hes1 contributes to diverse differentiation responses of embryonic stem cells

scientific article

The direct cloning of the yeast genome using the gap-filling method and the complete physical mapping of Saccharomyces cerevisiae chromosome VI ⬇️

scientific article published on December 20, 1991

The maintenance of chromosome structure: positioning and functioning of SMC complexes.

scientific article

The novel lncRNA CALIC upregulates AXL to promote colon cancer metastasis

scientific article published on 29 July 2019

The replication checkpoint protects fork stability by releasing transcribed genes from nuclear pores.

scientific article published on July 2011

The transcription factor ATF7 mediates lipopolysaccharide-induced epigenetic changes in macrophages involved in innate immunological memory.

scientific article published on 31 August 2015

interleukin-11 induces and maintains progenitors of different cell lineages during Xenopus tadpole tail regeneration

scientific article published on 8 September 2017

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