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List of works by Xiaowen Liu

A (1.5 + epsilon)-approximation algorithm for unsigned translocation distance.

scientific article published in January 2008

A Markov Chain Monte Carlo Method for Estimating the Statistical Significance of Proteoform Identifications by Top-Down Mass Spectrometry

scientific article published on 28 January 2019

A Spectrum Graph-Based Protein Sequence Filtering Algorithm for Proteoform Identification by Top-Down Mass Spectrometry.

scientific article published in November 2017

A new scoring function for top-down spectral deconvolution.

scientific article

An efficient algorithm for the blocked pattern matching problem.

scientific article

An efficient voting algorithm for finding additive biclusters with random background.

scientific article

Capillary Zone Electrophoresis-Tandem Mass Spectrometry with Activated Ion Electron Transfer Dissociation for Large-scale Top-down Proteomics

scientific article published on 09 May 2019

Characterization of Proteoforms with Unknown Post-translational Modifications Using the MIScore

scientific article published on 13 June 2016

Correlation Analysis of Histopathology and Proteogenomics Data for Breast Cancer

scientific article published on 08 July 2019

De Novo Sequencing of Peptides from High-Resolution Bottom-Up Tandem Mass Spectra using Top-Down Intended Methods.

scientific article

De Novo Sequencing of Peptides from Top-Down Tandem Mass Spectra

scientific article

De novo protein sequencing by combining top-down and bottom-up tandem mass spectra.

scientific article

Deep Top-Down Proteomics Using Capillary Zone Electrophoresis-Tandem Mass Spectrometry: Identification of 5700 Proteoforms from the Escherichia coli Proteome.

scientific article

Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery.

scientific article

Filling a Protein Scaffold With a Reference.

scientific article published on 9 February 2017

Identification and Quantification of Proteoforms by Mass Spectrometry

scientific article published on 01 May 2019

Identification of Glycopeptides with Multiple Hydroxylysine O-Glycosylation Sites by Tandem Mass Spectrometry

scientific article published on 13 November 2015

Identification of ultramodified proteins using top-down tandem mass spectra.

scientific article

Large-Scale Qualitative and Quantitative Top-Down Proteomics Using Capillary Zone Electrophoresis-Electrospray Ionization-Tandem Mass Spectrometry with Nanograms of Proteome Samples

scientific article published on 09 April 2019

Large-scale Top-down Proteomics Using Capillary Zone Electrophoresis Tandem Mass Spectrometry

scientific article published on 24 October 2018

MASH Suite Pro: A Comprehensive Software Tool for Top-Down Proteomics

scientific article published on 23 November 2015

Native Proteomics in Discovery Mode Using Size-Exclusion Chromatography-Capillary Zone Electrophoresis-Tandem Mass Spectrometry

scientific article published on 13 August 2018

Protein identification using top-down.

scientific article

Proteoform Identification by Combining RNA-Seq and Top-Down Mass Spectrometry

scientific article published on 12 November 2020

Proteomic Characterization Reveals That MMP-3 Correlates With Bronchiolitis Obliterans Syndrome Following Allogeneic Hematopoietic Cell and Lung Transplantation.

scientific article

Quantitative analysis of human salivary gland-derived intact proteome using top-down mass spectrometry

scientific article published on 13 April 2014

Single-Shot Top-Down Proteomics with Capillary Zone Electrophoresis-Electrospray Ionization-Tandem Mass Spectrometry for Identification of Nearly 600 Escherichia coli Proteoforms.

scientific article

Spectral probabilities of top-down tandem mass spectra

scientific article

SpectroGene: A Tool for Proteogenomic Annotations Using Top-Down Spectra.

scientific article published on 2 December 2015

Speeding up tandem mass spectral identification using indexes.

scientific article published on 27 April 2012

Systematic Evaluation of Protein Sequence Filtering Algorithms for Proteoform Identification Using Top-Down Mass Spectrometry.

scientific article published on 12 January 2018

Top-down Mass Spectrometry Analysis of Human Serum Autoantibody Antigen-Binding Fragments

scientific article published on 20 February 2019

Top-down analysis of immunoglobulin G isotypes 1 and 2 with electron transfer dissociation on a high-field Orbitrap mass spectrometer

scientific article

Top-down analysis of protein samples by de novo sequencing techniques.

scientific article

Top-down proteomics reveals a unique protein S-thiolation switch in Salmonella Typhimurium in response to infection-like conditions.

scientific article

Top-down proteomics reveals concerted reductions in myofilament and Z-disc protein phosphorylation after acute myocardial infarction

scientific article

TopMSV: A Web-Based Tool for Top-Down Mass Spectrometry Data Visualization

scientific article published on 29 March 2021

TopPIC: a software tool for top-down mass spectrometry-based proteoform identification and characterization.

scientific article published on 16 July 2016

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