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List of works by Patrick K. H. Lee

A comparative genomics and reductive dehalogenase gene transcription study of two chloroethene-respiring bacteria, Dehalococcoides mccartyi strains MB and 11a

scientific article

Airborne bacterial assemblage in a zero carbon building: a case study

scientific article

An internal reference technique for accurately quantifying specific mRNAs by real-time PCR with application to the tceA reductive dehalogenase gene.

scientific article

Changes of the human skin microbiota upon chronic exposure to polycyclic aromatic hydrocarbon pollutants

scientific article published on 26 June 2020

Characterization of four TCE-dechlorinating microbial enrichments grown with different cobalamin stress and methanogenic conditions.

scientific article

Characterization of the public transit air microbiome and resistome reveals geographical specificity

scientific article published on 26 May 2021

City-scale distribution and dispersal routes of mycobiome in residences.

scientific article published on 4 October 2017

Development of a fluorescence-activated cell sorting method coupled with whole genome amplification to analyze minority and trace Dehalococcoides genomes in microbial communities.

scientific article published on 21 January 2015

Discrimination of multiple Dehalococcoides strains in a trichloroethene enrichment by quantification of their reductive dehalogenase genes

scientific article

Diurnal variation in the human skin microbiome affects accuracy of forensic microbiome matching

scientific article published on 05 June 2021

Effect of CH4/O2 ratio on fatty acid profile and polyhydroxybutyrate content in a heterotrophic-methanotrophic consortium

scientific article published on 3 August 2015

Effect of composites based nickel foam anode in microbial fuel cell using Acetobacter aceti and Gluconobacter roseus as a biocatalysts

scientific article published on 3 March 2016

Effects of sludge inoculum and organic feedstock on active microbial communities and methane yield during anaerobic digestion

scientific article published on 13 October 2015

Effects of varying growth conditions on stable carbon isotope fractionation of trichloroethene (TCE) by tceA-containing Dehalococcoides mccartyi strains

scientific article published on 15 October 2013

Erratum: Insights into the pan-microbiome: skin microbial communities of Chinese individuals differ from other racial groups

scientific article published on 25 February 2016

Fomite Transmission Follows Invasion Ecology Principles

scientific article published on 03 May 2022

Genome-centric metatranscriptomes and ecological roles of the active microbial populations during cellulosic biomass anaerobic digestion.

scientific article

Genomic Evidence for Simultaneous Optimization of Transcription and Translation through Codon Variants in the pmoCAB Operon of Type Ia Methanotrophs

scientific article published on 23 July 2019

Global gene expression of Dehalococcoides within a robust dynamic TCE-dechlorinating community under conditions of periodic substrate supply.

scientific article published on 9 February 2013

Highly host-linked viromes in the built environment possess habitat-dependent diversity and functions for potential virus-host coevolution

scientific article published in 2023

Indoor air bacterial communities in Hong Kong households assemble independently of occupant skin microbiomes.

scientific article published on 29 April 2015

Indoor-air microbiome in an urban subway network: diversity and dynamics

scientific article

Influence of trace erythromycin and eryhthromycin-H2O on carbon and nutrients removal and on resistance selection in sequencing batch reactors (SBRs).

scientific article

Insights into the pan-microbiome: skin microbial communities of Chinese individuals differ from other racial groups

scientific article published on 16 July 2015

Integrative Genome-Scale Metabolic Modeling Reveals Versatile Metabolic Strategies for Methane Utilization in Methylomicrobium album BG8

scientific article published on 08 March 2022

Interplay between Position-Dependent Codon Usage Bias and Hydrogen Bonding at the 5' End of ORFeomes

scientific article published on 11 August 2020

Long-Term Enrichment on Cellulose or Xylan Causes Functional and Taxonomic Convergence of Microbial Communities from Anaerobic Digesters

scientific article

Mechanisms of antibacterial activity of MgO: non-ROS mediated toxicity of MgO nanoparticles towards Escherichia coli.

scientific article published on 17 December 2013

Metagenomic Reconstruction of Key Anaerobic Digestion Pathways in Municipal Sludge and Industrial Wastewater Biogas-Producing Systems

scientific article published on 24 May 2016

Metagenomic analysis of a stable trichloroethene-degrading microbial community.

scientific article

Microbial Communities in Full-Scale Wastewater Treatment Systems Exhibit Deterministic Assembly Processes and Functional Dependency over Time

scientific article published in 2021

Modular Metabolic Engineering for Biobased Chemical Production

scientific article published on 28 July 2018

Metagenomic insights into the microbial communities of inert and oligotrophic outdoor pier surfaces of a coastal city

scientific article published on 02 November 2021

Profiling Airborne Microbiota in Mechanically Ventilated Buildings Across Seasons in Hong Kong Reveals Higher Metabolic Activity in Low-Abundance Bacteria

scientific article published on 21 December 2020

Pyrosequencing of mcrA and archaeal 16S rRNA genes reveals diversity and substrate preferences of methanogen communities in anaerobic digesters

scientific article

Quantifying genes and transcripts to assess the in situ physiology of "Dehalococcoides" spp. in a trichloroethene-contaminated groundwater site

scientific article

Reductive dehalogenase gene expression as a biomarker for physiological activity of Dehalococcoides spp.

scientific article

Resource recovery from wastewater: application of meta-omics to phosphorus and carbon management.

scientific article published on 29 March 2015

Stable carbon isotope fractionation of chloroethenes by dehalorespiring isolates.

scientific article published in June 2007

Substrate induced emergence of different active bacterial and archaeal assemblages during biomethane production.

scientific article

The roles of the outdoors and occupants in contributing to a potential pan-microbiome of the built environment: a review

scientific article

Toxicity of metal oxide nanoparticles: mechanisms, characterization, and avoiding experimental artefacts.

scientific article

Transcriptomic Responses of the Interactions between Clostridium cellulovorans 743B and Rhodopseudomonas palustris CGA009 in a Cellulose-Grown Coculture for Enhanced Hydrogen Production

scientific article published on 20 May 2016

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