List of works - Takane Katayama

(R,S)-tetrahydropapaveroline production by stepwise fermentation using engineered Escherichia coli

scientific article published on 21 October 2014

1,2-alpha-l-Fucosynthase: a glycosynthase derived from an inverting alpha-glycosidase with an unusual reaction mechanism.

scientific article

A bacterial platform for fermentative production of plant alkaloids

scientific article

A bacterial sulfoglycosidase highlights mucin O-glycan breakdown in the gut ecosystem

scientific article published in 2023

A rapid, simple, and effective method of constructing a randomly mutagenized plasmid library free from ligation

scientific article published on 07 April 2008

A β1-6/β1-3 galactosidase from Bifidobacterium animalis subsp. lactis Bl-04 gives insight into sub-specificities of β-galactoside catabolism within Bifidobacterium

scientific article

Application study of 1,2-α-l-fucosynthase: introduction of Fucα1-2Gal disaccharide structures on N-glycan, ganglioside, and xyloglucan oligosaccharide.

scientific article published on 11 November 2016

Asymmetric synthesis of tetrahydroisoquinolines by enzymatic Pictet-Spengler reaction.

scientific article

Bifidobacterium bifidum lacto-N-biosidase, a critical enzyme for the degradation of human milk oligosaccharides with a type 1 structure.

scientific article published on 9 May 2008

Bifidobacterium species associated with breastfeeding produce aromatic lactic acids in the infant gut

scientific article published on 21 October 2021

Bifunctional properties and characterization of a novel sialidase with esterase activity from Bifidobacterium bifidum

scientific article published on 20 July 2018

Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways

scientific article published on 03 July 2020

Carboxyspermidine decarboxylase of the prominent intestinal microbiota species Bacteroides thetaiotaomicron is required for spermidine biosynthesis and contributes to normal growth.

scientific article published on 27 April 2016

Changes in microbiota population during fermentation of narezushi as revealed by pyrosequencing analysis

scientific article published on 07 January 2012

Construction of an effective protein expression system using the tpl promoter in Escherichia coli

scientific article published on 01 September 2005

Crystal Structures of Phosphoketolase: THIAMINE DIPHOSPHATE-DEPENDENT DEHYDRATION MECHANISM

scientific article

Crystal Structures of a Glycoside Hydrolase Family 20 Lacto-N-biosidase from Bifidobacterium bifidum ⬇️

scientific article published on March 11, 2013

Development of oral cancer vaccine using recombinant Bifidobacterium displaying Wilms' tumor 1 protein

scientific article published on 15 March 2017

Differences in the substrate specificities and active-site structures of two α-L-fucosidases (glycoside hydrolase family 29) from Bacteroides thetaiotaomicron

scientific article published on 07 May 2012

Discovery of α-L-arabinopyranosidases from human gut microbiome expands the diversity within glycoside hydrolase family 42.

scientific article published on 23 October 2017

Distinct substrate specificities of three glycoside hydrolase family 42 β-galactosidases from Bifidobacterium longum subsp. infantis ATCC 15697.

scientific article published on 23 November 2013

Effective production of 3,4-dihydroxyphenyl-L-alanine (L-DOPA) with Erwinia herbicola cells carrying a mutant transcriptional regulator TyrR.

scientific article published in February 2005

Enzymatic Adaptation of Bifidobacterium bifidum to Host Glycans, Viewed from Glycoside Hydrolyases and Carbohydrate-Binding Modules

scientific article published on 28 March 2020

Evolutionary adaptation in fucosyllactose uptake systems supports bifidobacteria-infant symbiosis

scientific article published on 28 August 2019

Gaining insight into the catalysis by GH20 lacto-N-biosidase using small molecule inhibitors and structural analysis

scientific article

Generation of a Mutant Mucor hiemalis Endoglycosidase That Acts on Core-fucosylated N-Glycans.

scientific article published on 14 September 2016

Host-derived glycans serve as selected nutrients for the gut microbe: human milk oligosaccharides and bifidobacteria.

scientific article published on 3 February 2016

Identification and characterization of a sulfoglycosidase from Bifidobacterium bifidum implicated in mucin glycan utilization.

scientific article published on 17 August 2017

Identification and molecular cloning of a novel glycoside hydrolase family of core 1 type O-glycan-specific endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum.

scientific article

Immunomodulating activity of exopolysaccharide-producing Leuconostoc mesenteroides strain NTM048 from green peas

scientific article published on 2 January 2014

Improvement of reticuline productivity from dopamine by using engineered Escherichia coli.

scientific article published on 7 October 2013

Introduction of H-antigens into oligosaccharides and sugar chains of glycoproteins using highly efficient 1,2-α-l-fucosynthase.

scientific article

Isolation of a new phlorotannin, a potent inhibitor of carbohydrate-hydrolyzing enzymes, from the brown alga Sargassum patens.

scientific article published on 24 May 2012

Kluyveromyces marxianus-based platform for direct ethanol fermentation and recovery from cellulosic materials under air-ventilated conditions ⬇️

scientific article published on January 21, 2012

Laboratory-scale production of (S)-reticuline, an important intermediate of benzylisoquinoline alkaloids, using a bacterial-based method.

scientific article published on 14 October 2016

Microbial production of novel sulphated alkaloids for drug discovery.

scientific article

Minority species influences microbiota formation: the role of Bifidobacterium with extracellular glycosidases in bifidus flora formation in breastfed infant guts

scientific article published on 13 January 2019

Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum.

scientific article published on 4 April 2017

Molecular cloning and characterization of Bifidobacterium bifidum 1,2-alpha-L-fucosidase (AfcA), a novel inverting glycosidase (glycoside hydrolase family 95)

scientific article published in August 2004

Neonatal oral fluid as a transmission route for bifidobacteria to the infant gut immediately after birth.

scientific article

Novel substrate specificities of two lacto-N-biosidases towards β-linked galacto-N-biose-containing oligosaccharides of globo H, Gb5, and GA1.

scientific article

Oral Combination Vaccine, Comprising Bifidobacterium Displaying Hepatitis C Virus Nonstructural Protein 3 and Interferon-α, Induces Strong Cellular Immunity Specific to Nonstructural Protein 3 in Mice

scientific article published on 23 January 2017

Oral administration of genetically modified Bifidobacterium displaying HCV-NS3 multi-epitope fusion protein could induce an HCV-NS3-specific systemic immune response in mice

scientific article published on 21 March 2014

Overexpression, crystallization and preliminary X-ray analysis of xylulose-5-phosphate/fructose-6-phosphate phosphoketolase from Bifidobacterium breve

scientific article

Preclinical Development of a WT1 Oral Cancer Vaccine Using a Bacterial Vector to Treat Castration-Resistant Prostate Cancer

scientific article published on 01 March 2019

Priority effects shape the structure of infant-type Bifidobacterium communities on human milk oligosaccharides

scientific article published in 2022

Purification, crystallization and preliminary X-ray analysis of beta-glucosidase from Kluyveromyces marxianus NBRC1777

scientific article (publication date: November 2009)

Pyrosequencing analysis of microbiota in Kaburazushi, a traditional medieval sushi in Japan.

scientific article

Pyrosequencing survey of the microbial diversity of 'narezushi', an archetype of modern Japanese sushi.

scientific article published on 19 October 2011

Recombinant expression, purification, and characterization of polyphenol oxidase 2 (VvPPO2) from "Shine Muscat" (Vitis labruscana Bailey × Vitis vinifera L.).

scientific article

Sharing of human milk oligosaccharides degradants within bifidobacterial communities in faecal cultures supplemented with Bifidobacterium bifidum

scientific article published in Scientific Reports

Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I

scientific article

The LIV-I/LS system as a determinant of azaserine sensitivity of Escherichia coli K-12.

scientific article

The γ-aminobutyric acid-producing ability under low pH conditions of lactic acid bacteria isolated from traditional fermented foods of Ishikawa Prefecture, Japan, with a strong ability to produce ACE-inhibitory peptides.

scientific article

Total biosynthesis of opiates by stepwise fermentation using engineered Escherichia coli

scientific article published on 5 February 2016

Tracing microbiota changes in yamahai-moto, the traditional Japanese sake starter.

scientific article published on 19 October 2015

Two distinct alpha-L-fucosidases from Bifidobacterium bifidum are essential for the utilization of fucosylated milk oligosaccharides and glycoconjugates.

scientific article

Use of Gifu Anaerobic Medium for culturing 32 dominant species of human gut microbes and its evaluation based on short-chain fatty acids fermentation profiles.

scientific article

Varied Pathways of Infant Gut-Associated Bifidobacterium to Assimilate Human Milk Oligosaccharides: Prevalence of the Gene Set and Its Correlation with Bifidobacteria-Rich Microbiota Formation

scientific article published on 26 December 2019

α-N-Acetylglucosaminidase from Bifidobacterium bifidum specifically hydrolyzes α-linked N-acetylglucosamine at nonreducing terminus of O-glycan on gastric mucin.

scientific article

List of works by Takane Katayama

(R,S)-tetrahydropapaveroline production by stepwise fermentation using engineered Escherichia coli

1,2-alpha-l-Fucosynthase: a glycosynthase derived from an inverting alpha-glycosidase with an unusual reaction mechanism.

A bacterial platform for fermentative production of plant alkaloids

A bacterial sulfoglycosidase highlights mucin O-glycan breakdown in the gut ecosystem

A rapid, simple, and effective method of constructing a randomly mutagenized plasmid library free from ligation

A β1-6/β1-3 galactosidase from Bifidobacterium animalis subsp. lactis Bl-04 gives insight into sub-specificities of β-galactoside catabolism within Bifidobacterium

Application study of 1,2-α-l-fucosynthase: introduction of Fucα1-2Gal disaccharide structures on N-glycan, ganglioside, and xyloglucan oligosaccharide.

Asymmetric synthesis of tetrahydroisoquinolines by enzymatic Pictet-Spengler reaction.

Bifidobacterium bifidum lacto-N-biosidase, a critical enzyme for the degradation of human milk oligosaccharides with a type 1 structure.

Bifidobacterium species associated with breastfeeding produce aromatic lactic acids in the infant gut

Bifunctional properties and characterization of a novel sialidase with esterase activity from Bifidobacterium bifidum

Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways

Carboxyspermidine decarboxylase of the prominent intestinal microbiota species Bacteroides thetaiotaomicron is required for spermidine biosynthesis and contributes to normal growth.

Changes in microbiota population during fermentation of narezushi as revealed by pyrosequencing analysis

Construction of an effective protein expression system using the tpl promoter in Escherichia coli

Crystal Structures of Phosphoketolase: THIAMINE DIPHOSPHATE-DEPENDENT DEHYDRATION MECHANISM

Crystal Structures of a Glycoside Hydrolase Family 20 Lacto-N-biosidase from Bifidobacterium bifidum ⬇️

Development of oral cancer vaccine using recombinant Bifidobacterium displaying Wilms' tumor 1 protein

Differences in the substrate specificities and active-site structures of two α-L-fucosidases (glycoside hydrolase family 29) from Bacteroides thetaiotaomicron

Discovery of α-L-arabinopyranosidases from human gut microbiome expands the diversity within glycoside hydrolase family 42.

Distinct substrate specificities of three glycoside hydrolase family 42 β-galactosidases from Bifidobacterium longum subsp. infantis ATCC 15697.

Effective production of 3,4-dihydroxyphenyl-L-alanine (L-DOPA) with Erwinia herbicola cells carrying a mutant transcriptional regulator TyrR.

Enzymatic Adaptation of Bifidobacterium bifidum to Host Glycans, Viewed from Glycoside Hydrolyases and Carbohydrate-Binding Modules

Evolutionary adaptation in fucosyllactose uptake systems supports bifidobacteria-infant symbiosis

Gaining insight into the catalysis by GH20 lacto-N-biosidase using small molecule inhibitors and structural analysis

Generation of a Mutant Mucor hiemalis Endoglycosidase That Acts on Core-fucosylated N-Glycans.

Host-derived glycans serve as selected nutrients for the gut microbe: human milk oligosaccharides and bifidobacteria.

Identification and characterization of a sulfoglycosidase from Bifidobacterium bifidum implicated in mucin glycan utilization.

Identification and molecular cloning of a novel glycoside hydrolase family of core 1 type O-glycan-specific endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum.

Immunomodulating activity of exopolysaccharide-producing Leuconostoc mesenteroides strain NTM048 from green peas

Improvement of reticuline productivity from dopamine by using engineered Escherichia coli.

Introduction of H-antigens into oligosaccharides and sugar chains of glycoproteins using highly efficient 1,2-α-l-fucosynthase.

Isolation of a new phlorotannin, a potent inhibitor of carbohydrate-hydrolyzing enzymes, from the brown alga Sargassum patens.

Kluyveromyces marxianus-based platform for direct ethanol fermentation and recovery from cellulosic materials under air-ventilated conditions ⬇️

Laboratory-scale production of (S)-reticuline, an important intermediate of benzylisoquinoline alkaloids, using a bacterial-based method.

Microbial production of novel sulphated alkaloids for drug discovery.

Minority species influences microbiota formation: the role of Bifidobacterium with extracellular glycosidases in bifidus flora formation in breastfed infant guts

Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum.

Molecular cloning and characterization of Bifidobacterium bifidum 1,2-alpha-L-fucosidase (AfcA), a novel inverting glycosidase (glycoside hydrolase family 95)

Neonatal oral fluid as a transmission route for bifidobacteria to the infant gut immediately after birth.

Novel substrate specificities of two lacto-N-biosidases towards β-linked galacto-N-biose-containing oligosaccharides of globo H, Gb5, and GA1.

Oral Combination Vaccine, Comprising Bifidobacterium Displaying Hepatitis C Virus Nonstructural Protein 3 and Interferon-α, Induces Strong Cellular Immunity Specific to Nonstructural Protein 3 in Mice

Oral administration of genetically modified Bifidobacterium displaying HCV-NS3 multi-epitope fusion protein could induce an HCV-NS3-specific systemic immune response in mice

Overexpression, crystallization and preliminary X-ray analysis of xylulose-5-phosphate/fructose-6-phosphate phosphoketolase from Bifidobacterium breve

Preclinical Development of a WT1 Oral Cancer Vaccine Using a Bacterial Vector to Treat Castration-Resistant Prostate Cancer

Priority effects shape the structure of infant-type Bifidobacterium communities on human milk oligosaccharides

Purification, crystallization and preliminary X-ray analysis of beta-glucosidase from Kluyveromyces marxianus NBRC1777

Pyrosequencing analysis of microbiota in Kaburazushi, a traditional medieval sushi in Japan.

Pyrosequencing survey of the microbial diversity of 'narezushi', an archetype of modern Japanese sushi.

Recombinant expression, purification, and characterization of polyphenol oxidase 2 (VvPPO2) from "Shine Muscat" (Vitis labruscana Bailey × Vitis vinifera L.).

Sharing of human milk oligosaccharides degradants within bifidobacterial communities in faecal cultures supplemented with Bifidobacterium bifidum

Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I

The LIV-I/LS system as a determinant of azaserine sensitivity of Escherichia coli K-12.

The γ-aminobutyric acid-producing ability under low pH conditions of lactic acid bacteria isolated from traditional fermented foods of Ishikawa Prefecture, Japan, with a strong ability to produce ACE-inhibitory peptides.

Total biosynthesis of opiates by stepwise fermentation using engineered Escherichia coli

Tracing microbiota changes in yamahai-moto, the traditional Japanese sake starter.

Two distinct alpha-L-fucosidases from Bifidobacterium bifidum are essential for the utilization of fucosylated milk oligosaccharides and glycoconjugates.

Use of Gifu Anaerobic Medium for culturing 32 dominant species of human gut microbes and its evaluation based on short-chain fatty acids fermentation profiles.

Varied Pathways of Infant Gut-Associated Bifidobacterium to Assimilate Human Milk Oligosaccharides: Prevalence of the Gene Set and Its Correlation with Bifidobacteria-Rich Microbiota Formation

α-N-Acetylglucosaminidase from Bifidobacterium bifidum specifically hydrolyzes α-linked N-acetylglucosamine at nonreducing terminus of O-glycan on gastric mucin.