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List of works by W Evan Johnson

A Western-Type Dietary Pattern Induces an Atherogenic Gene Expression Profile in the Coronary Arteries of the Ossabaw Pig

article

A field guide to genomics research

scientific article (publication date: 2014)

A single-sample microarray normalization method to facilitate personalized-medicine workflows.

scientific article

Adjusting batch effects in microarray expression data using empirical Bayes methods

scientific article (publication date: 2007)

Alternative empirical Bayes models for adjusting for batch effects in genomic studies.

scientific article published on 13 July 2018

ComBat-seq: batch effect adjustment for RNA-seq count data

scientific article published on 21 September 2020

Combating subclonal evolution of resistant cancer phenotypes

scientific article published in November 2017

Comprehensive generation, visualization, and reporting of quality control metrics for single-cell RNA sequencing data

scientific article published on 30 March 2022

Cytoplasmic FMR1-Interacting Protein 2 Is a Major Genetic Factor Underlying Binge Eating

scientific article published on 25 October 2016

DNA Demethylase Activity Maintains Intestinal Cells in an Undifferentiated State Following Loss of APC ⬇️

scientific article published on September 17, 2010

DNA specificity determinants associate with distinct transcription factor functions

scientific article

ETS-4 is a transcriptional regulator of life span in Caenorhabditis elegans

scientific article

Effects of ADARs on small RNA processing pathways in C. elegans

scientific article

Model-based analysis of tiling-arrays for ChIP-chip.

scientific article

Model-based analysis of two-color arrays (MA2C).

scientific article

Multiplatform single-sample estimates of transcriptional activation

scientific article published on 15 October 2013

Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data

scientific article

Respiratory syncytial virus M2-1 protein associates non-specifically with viral messenger RNA and with specific cellular messenger RNA transcripts

scientific article published on 18 May 2021

Striatal transcriptome analysis of a congenic mouse line (chromosome 11: 50-60Mb) exhibiting reduced methamphetamine sensitivity

scientific article published on 11 April 2016

Tackling the widespread and critical impact of batch effects in high-throughput data

scientific article (publication date: October 2010)

animalcules: interactive microbiome analytics and visualization in R

scientific article published on 28 March 2021

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