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List of works by Brandi L Cantarel

A multidimensional blood stimulation assay reveals immune alterations underlying systemic juvenile idiopathic arthritis

scientific article published on 21 September 2017

Analysis of archived residual newborn screening blood spots after whole genome amplification

scientific article published on 13 August 2015

Analysis of the gut microbiota in the old order Amish and its relation to the metabolic syndrome.

scientific article

BAYSIC: a Bayesian method for combining sets of genome variants with improved specificity and sensitivity.

scientific article

Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations.

scientific article

Characterization of the Asian Citrus Psyllid Transcriptome.

scientific article published on January 2014

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

scholarly article

Dietary simple sugars alter microbial ecology in the gut and promote colitis in mice

scientific article published on 01 October 2020

Erratum: IL-1 is a critical regulator of group 2 innate lymphoid cell function and plasticity

scientific article published on 01 July 2016

Exploring the relationship between sequence similarity and accurate phylogenetic trees.

scientific article

Functionally pathogenic EARS2 variants in vitro may not manifest a phenotype in vivo

scientific article

GEAMP, a novel gastroesophageal junction carcinoma cell line derived from a malignant pleural effusion

scientific article published on 10 July 2019

Gut microbiota in multiple sclerosis: possible influence of immunomodulators

scientific article published on June 2015

IL-1 is a critical regulator of group 2 innate lymphoid cell function and plasticity.

scientific article published on 25 April 2016

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

scientific article published in January 2017

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

scientific article published on 01 January 2019

Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease

scientific article

Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation.

scientific article

Intra-tracheal Administration of Haemophilus influenzae in Mouse Models to Study Airway Inflammation

scientific article

Itch inhibits IL-17-mediated colon inflammation and tumorigenesis by ROR-γt ubiquitination.

scientific article published on 20 June 2016

MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

scientific article (publication date: 2008)

Metaproteomics reveals persistent and phylum-redundant metabolic functional stability in adult human gut microbiomes of Crohn's remission patients despite temporal variations in microbial taxa, genomes, and proteomes

scientific article published on 11 February 2019

Multi-tiered analyses of honey bees that resist or succumb to parasitic mites and viruses

scientific article published on 06 October 2021

Personalized Immunomonitoring Uncovers Molecular Networks that Stratify Lupus Patients

scientific article published on 01 June 2016

Sparse distance-based learning for simultaneous multiclass classification and feature selection of metagenomic data.

scientific article

Strategies for metagenomic-guided whole-community proteomics of complex microbial environments

scientific article

Using Mothur to Determine Bacterial Community Composition and Structure in 16S Ribosomal RNA Datasets

scientific article published on 01 September 2019

Whole Genome Sequencing Accurately Identifies Resistance to Extended Spectrum β-Lactams for Major Gram-Negative Bacterial Pathogens.

scientific article published on 3 May 2017

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