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List of works by Rui-Xin Zhu

3D-QSAR studies with the aid of molecular docking for a series of non-steroidal FXR agonists

scientific article published on 31 January 2007

A new protein-ligand binding sites prediction method based on the integration of protein sequence conservation information ⬇️

scientific article published on December 14, 2011

A review of Chinese herbal medicine for the treatment of chronic heart failure.

scientific article published on 25 September 2017

Antiapoptosis and Antifibrosis Effects of Qishen Granules on Heart Failure Rats via Hippo Pathway

scientific article published on 12 December 2019

Binding Mechanism of Inhibitors to CDK5/p25 Complex: Free Energy Calculation and Ranking Aggregation Analysis

scientific article published on 27 February 2013

Combining genomic and network characteristics for extended capability in predicting synergistic drugs for cancer.

scientific article

Comparison of different ranking methods in protein-ligand binding site prediction.

scientific article

Corrigendum to "Antiapoptosis and Antifibrosis Effects of Qishen Granules on Heart Failure Rats via Hippo Pathway"

scientific article published on 01 July 2020

Corrigendum: Difference in Pathomechanism Between Crohn's Disease and Ulcerative Colitis Revealed by Colon Transcriptome

scientific article published on 01 October 2019

Decomposing the Mechanism of Qishen Granules in the Treatment of Heart Failure by a Quantitative Pathway Analysis Method

scientific article published on 23 July 2018

Difference in Pathomechanism Between Crohn's Disease and Ulcerative Colitis Revealed by Colon Transcriptome

scientific article published on 01 March 2019

Differential analysis of chromatin accessibility and histone modifications for predicting mouse developmental enhancers

scientific article published on 01 November 2018

Discrimination of approved drugs from experimental drugs by learning methods

scientific article

Functional Cross-Talking between Differentially Expressed and Alternatively Spliced Genes in Human Liver Cancer Cells Treated with Berberine

scientific article published on 25 November 2015

Gene expression module-based chemical function similarity search.

scientific article

HIM-herbal ingredients in-vivo metabolism database

scientific article published on 31 May 2013

HIT: linking herbal active ingredients to targets ⬇️

scientific article published on November 21, 2010

HuoXueJieDu Formula Alleviates Diabetic Retinopathy in Rats by Inhibiting SOCS3-STAT3 and TIMP1-A2M Pathways.

scientific article published on 29 November 2017

Identification of Toxic Pyrrolizidine Alkaloids and Their Common Hepatotoxicity Mechanism.

scientific article published on 7 March 2016

Identification of microbial markers across populations in early detection of colorectal cancer

scientific article published on 24 May 2021

In silico target-specific siRNA design based on domain transfer in heterogeneous data.

scientific article

Insight into potential toxicity mechanisms of melamine: an in silico study.

scientific article

Integrated QSAR study for inhibitors of hedgehog signal pathway against multiple cell lines:a collaborative filtering method ⬇️

scientific article published on July 31, 2012

Integrating clinical indexes into four-diagnostic information contributes to the Traditional Chinese Medicine (TCM) syndrome diagnosis of chronic hepatitis B.

scientific article

Investigations on inhibitors of hedgehog signal pathway: a quantitative structure-activity relationship study ⬇️

scientific article

Multi-target QSAR modelling in the analysis and design of HIV-HCV co-inhibitors: an in-silico study ⬇️

scientific article published on July 20, 2011

Novel Natural Inhibitors of CYP1A2 Identified by in Silico and in Vitro Screening ⬇️

scientific article published on May 18, 2011

Phylogenetic analyses with systematic taxon sampling show that mitochondria branch within Alphaproteobacteria

scientific article published on 13 July 2020

Predicting the Mutating Distribution at Antigenic Sites of the Influenza Virus.

scientific article published on 3 February 2016

Proteochemometric modeling of the antigen-antibody interaction: new fingerprints for antigen, antibody and epitope-paratope interaction

scientific article

Proteochemometric modeling of the bioactivity spectra of HIV-1 protease inhibitors by introducing protein-ligand interaction fingerprint

scientific article

Putative Familial Transmissible Bacteria of Various Body Niches Link with Home Environment and Children's Immune Health

scientific article published on 08 December 2021

Quantitatively integrating molecular structure and bioactivity profile evidence into drug-target relationship analysis

scientific article

SEPPA 2.0--more refined server to predict spatial epitope considering species of immune host and subcellular localization of protein antigen

scientific article

Screening Ingredients from Herbs against Pregnane X Receptor in the Study of Inductive Herb-Drug Interactions: Combining Pharmacophore and Docking-Based Rank Aggregation.

scientific article

Screening of selective histone deacetylase inhibitors by proteochemometric modeling.

scientific article

Structure-based characterization of canine–human chimeric uricases and its evolutionary implications ⬇️

scientific article published on March 28, 2012

Study on human GPCR-inhibitor interactions by proteochemometric modeling.

scientific article

The recent progress in proteochemometric modelling: focusing on target descriptors, cross-term descriptors and application scope.

scientific article published on 11 February 2016

The response of archaeal species to seasonal variables in a subtropical aerated soil: insight into the low abundant methanogens

scientific article

Towards a bioinformatics analysis of anti-Alzheimer's herbal medicines from a target network perspective.

scientific article published on 11 August 2012

When drug discovery meets web search: Learning to Rank for ligand-based virtual screening

scientific article (publication date: 2015)

iPEAP: integrating multiple omics and genetic data for pathway enrichment analysis.

scientific article

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