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List of works by Hui Jiang

A Unified Model for Joint Normalization and Differential Gene Expression Detection in RNA-Seq Data

scientific article published on 08 January 2018

A direct comparison of the KB™ Basecaller and phred for identifying the bases from DNA sequencing using chain termination chemistry

scientific article

A novel RNA in situ hybridization assay for the long noncoding RNA SChLAP1 predicts poor clinical outcome after radical prostatectomy in clinically localized prostate cancer

scientific article

A penalized likelihood approach for robust estimation of isoform expression

scientific article published on January 2015

Accurate and efficient estimation of small p-values with the cross-entropy method: applications in genomic data analysis

scientific article published on 01 July 2019

An integrated software system for analyzing ChIP-chip and ChIP-seq data

scientific article

Analysis of the androgen receptor-regulated lncRNA landscape identifies a role for ARLNC1 in prostate cancer progression.

scientific article published on 28 May 2018

Clinicopathologic characteristics of anterior prostate cancer (APC), including correlation with previous biopsy pathology.

scientific article published on 6 October 2015

Combined P53/PTEN deficiency activates expression of mesenchyme homeobox 1 (MEOX1) required for growth of triple-negative breast cancer

scientific article published on 28 May 2020

Comparative analysis of circulating tumor DNA stability In K3EDTA, Streck, and CellSave blood collection tubes.

scientific article published on 27 April 2016

Comparison of protein expression between human livers and the hepatic cell lines HepG2, Hep3B, and Huh7 using SWATH and MRM-HR proteomics: Focusing on drug-metabolizing enzymes.

scientific article published on 10 March 2018

Comprehensive multi-center assessment of small RNA-seq methods for quantitative miRNA profiling

scientific article published on 16 July 2018

Computational Aspects of Optional Pólya Tree

scientific article

Concurrent nuclear ERG and MYC protein overexpression defines a subset of locally advanced prostate cancer: Potential opportunities for synergistic targeted therapeutics

scientific article published on 08 March 2016

Correlating bladder cancer risk genes with their targeting microRNAs using MMiRNA-Tar

scientific article

Cross-hybridization modeling on Affymetrix exon arrays.

scientific article

Detection of splice junctions from paired-end RNA-seq data by SpliceMap.

scientific article

Determining Allele-Specific Protein Expression (ASPE) Using a Novel Quantitative Concatamer Based Proteomics Method

scientific article published on 04 September 2018

Development of Peptidomimetic Inhibitors of the ERG Gene Fusion Product in Prostate Cancer

scientific article

Development of Peptidomimetic Inhibitors of the ERG Gene Fusion Product in Prostate Cancer

scientific article published on 01 June 2017

Differential regulation of the c-Myc/Lin28 axis discriminates subclasses of rearranged MLL leukemia

scientific article published on 19 March 2016

Diversity of the vaginal microbiome correlates with preterm birth.

scientific article

Early role for IL-6 signalling during generation of induced pluripotent stem cells revealed by heterokaryon RNA-Seq.

scientific article

Expansion of CTCs from early stage lung cancer patients using a microfluidic co-culture model

scientific article

Expression of PDL1 (B7-H1) Before and After Neoadjuvant Chemotherapy in Urothelial Carcinoma.

scientific article

False Discovery Rate Control in Cancer Biomarker Selection Using Knockoffs

scientific article published on 29 May 2019

False discovery control for penalized variable selections with high-dimensional covariates

scientific article published on 15 December 2018

Fast approximation of small p-values in permutation tests by partitioning the permutations

scientific article published on 18 May 2017

Frequent discordance between ERG gene rearrangement and ERG protein expression in a rapid autopsy cohort of patients with lethal, metastatic, castration-resistant prostate cancer.

scientific article

Human transcriptome array for high-throughput clinical studies.

scientific article

Identifiability of isoform deconvolution from junction arrays and RNA-Seq.

scientific article

Identification of gene pairs through penalized regression subject to constraints

scientific article published on 3 November 2017

Identifying Interaction Clusters for MiRNA and MRNA Pairs in TCGA Network

scientific article published on 11 September 2019

Label-free absolute protein quantification with data-independent acquisition

scientific article published on 14 March 2019

Novel cancer stem cell targets during epithelial to mesenchymal transition in PTEN-deficient trastuzumab-resistant breast cancer

scientific article published on 06 June 2016

Performance of lateral flow device and galactomannan for the detection of Aspergillus species in bronchoalveolar fluid of patients at risk for invasive pulmonary aspergillosis.

scientific article

Programmed Death-ligand 1 Expression in Upper Tract Urothelial Carcinoma

scientific article published on 13 December 2016

RNA-Seq accurately identifies cancer biomarker signatures to distinguish tissue of origin.

scientific article

Rationale for Using Irreversible Epidermal Growth Factor Receptor Inhibitors in Combination with Phosphatidylinositol 3-Kinase Inhibitors for Advanced Head and Neck Squamous Cell Carcinoma

scientific article published on 11 March 2019

Response to the Comments on "Determining Allele-Specific Protein Expression (ASPE) Using a Novel Quantitative Concatamer Proteomics Method"

scientific article published on 09 January 2019

Single Cell Transcriptomics Analysis Identifies Nuclear Protein 1 as a Regulator of Docetaxel Resistance in Prostate Cancer Cells

scientific article published on 08 June 2020

Statistical Modeling of RNA-Seq Data.

scientific article

Statistical properties of an early stopping rule for resampling-based multiple testing.

scientific article published on 3 October 2012

Statistics in the Genomic Era

scientific article published on 18 April 2020

Targeted Degradation of BET Proteins in Triple-Negative Breast Cancer.

scientific article published on 16 February 2017

Targeting LRP8 inhibits breast cancer stem cells in triple-negative breast cancer

scientific article published on 15 September 2018

Testing the performance of a prototype lateral flow device using bronchoalveolar lavage fluid for the diagnosis of invasive pulmonary aspergillosis in high-risk patients.

scientific article published on 14 September 2017

The dynamics of the vaginal microbiome during infertility therapy with in vitro fertilization-embryo transfer.

scientific article published on 6 January 2012

The genomic landscape of UM-SCC oral cavity squamous cell carcinoma cell lines

scientific article published on 08 November 2018

The in vivo endothelial cell translatome is highly heterogeneous across vascular beds

scientific article published on 11 November 2019

The molecular landscape of the University of Michigan laryngeal squamous cell carcinoma cell line panel

scientific article published on 15 May 2019

Trastuzumab resistance induces EMT to transform HER2(+) PTEN(-) to a triple negative breast cancer that requires unique treatment options

scientific article

Variability in protein cargo detection in technical and biological replicates of exosome-enriched extracellular vesicles

scientific article published on 02 March 2020

rSeqDiff: detecting differential isoform expression from RNA-Seq data using hierarchical likelihood ratio test

scientific article

rSeqNP: a non-parametric approach for detecting differential expression and splicing from RNA-Seq data

scientific article

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