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List of works by Bruno A C Horta

A GROMOS Parameter Set for Vicinal Diether Functions: Properties of Polyethyleneoxide and Polyethyleneglycol

scientific article published on 08 August 2012

A GROMOS-Compatible Force Field for Small Organic Molecules in the Condensed Phase: The 2016H66 Parameter Set.

scientific article

Anti-biofilm potential of phenolic acids: the influence of environmental pH and intrinsic physico-chemical properties.

scientific article published in September 2016

Are all-atom any better than united-atom force fields for the description of liquid properties of alkanes?

scientific article published on 07 October 2020

Association of the anti-tuberculosis drug rifampicin with a PAMAM dendrimer

scientific article published on 28 May 2015

Chiral Chlorohydrins from the Biocatalyzed Reduction of Chloroketones: Chiral Building Blocks for Antiretroviral Drugs

Dynamical behavior of the vascular endothelial growth factor: biological implications

scientific article published on 01 May 2007

Effect of the cosolutes trehalose and methanol on the equilibrium and phase-transition properties of glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulations

scientific article

Enantiomeric Segregation in the Gel Phase of Lipid Bilayers ⬇️

scientific article published on May 16, 2011

Engineered monomeric human histidine triad nucleotide-binding protein 1 hydrolyzes fluorogenic acyl-adenylate and lysyl-tRNA synthetase-generated lysyl-adenylate

scientific article published on 02 March 2007

Evaluating Classical Force Fields against Experimental Cross-Solvation Free Energies

scientific article published on 04 November 2020

GROMOS++ Software for the Analysis of Biomolecular Simulation Trajectories

scientific article published on 16 September 2011

Influence of the Treatment of Nonbonded Interactions on the Thermodynamic and Transport Properties of Pure Liquids Calculated Using the 2016H66 Force Field

scientific article published on 27 February 2019

Insights into CC Chemokine Ligand 2/Chemokine Receptor 2 Molecular Recognition: A Step Forward toward Antichemotactic Agents

scientific article published on June 2017

Interaction of the disaccharides trehalose and gentiobiose with lipid bilayers: a comparative molecular dynamics study

scientific article published on 8 October 2010

Investigating the differential activation of vascular endothelial growth factor (VEGF) receptors.

scientific article published on 15 August 2009

Long-timescale motions in glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulation

scientific article published on 08 November 2014

MDWiZ: a platform for the automated translation of molecular dynamics simulations

scientific article

Molecular Dynamics Simulations of PAMAM and PPI Dendrimers Using the GROMOS-Compatible 2016H66 Force Field

scientific article published on 26 March 2019

New Interaction Parameters for Oxygen Compounds in the GROMOS Force Field: Improved Pure-Liquid and Solvation Properties for Alcohols, Ethers, Aldehydes, Ketones, Carboxylic Acids, and Esters

scientific article published on 25 March 2011

New functionalities in the GROMOS biomolecular simulation software

scientific article published on 11 November 2011

New insights into flavivirus biology: the influence of pH over interactions between prM and E proteins.

scientific article published on 24 October 2017

On the Effect of the Various Assumptions and Approximations used in Molecular Simulations on the Properties of Bio-Molecular Systems: Overview and Perspective on Issues

scientific article published on 30 December 2020

On the development of a nucleophilic methylthiolation methodology

scientific article published on 01 July 2020

On the structure, interactions, and dynamics of bound VEGF

scientific article published on 05 October 2007

Origin of the spectral shifts among the early intermediates of the rhodopsin photocycle.

scientific article published on 25 February 2014

Predicting the Miscibility and Rigidity of Poly(lactic-co-glycolic acid)/Polyethylene Glycol Blends via Molecular Dynamics Simulations

scientific article published on 12 May 2020

Reoptimized interaction parameters for the peptide-backbone model compound N-methylacetamide in the GROMOS force field: influence on the folding properties of two beta-peptides in methanol

scientific article

Self-Diffusion Coefficients of Methane/n-Hexane Mixtures at High Pressures: An Evaluation of the Finite-Size Effect and a Comparison of Force Fields

scientific article published on 14 August 2019

Simulating Bilayers of Nonionic Surfactants with the GROMOS-Compatible 2016H66 Force Field

scientific article published on 23 August 2017

Simulating the Transition between Gel and Liquid-Crystal Phases of Lipid Bilayers: Dependence of the Transition Temperature on the Hydration Level

scientific article published on 01 August 2010

Solvent effects on the decarboxylation of trichloroacetic acid: insights from ab initio molecular dynamics simulations

scientific article published on 01 August 2018

Systematic Optimization of a Fragment-Based Force Field against Experimental Pure-Liquid Properties Considering Large Compound Families: Application to Saturated Haloalkanes

scientific article published on 24 November 2020

Temperature Dependence of the Dielectric Permittivity of Acetic Acid, Propionic Acid and Their Methyl Esters: A Molecular Dynamics Simulation Study

article

The flavivirus capsid protein: Structure, function and perspectives towards drug design

scientific article (publication date: 2017)

The mechanism by which P250L mutation impairs flavivirus-NS1 dimerization: an investigation based on molecular dynamics simulations.

scientific article

gem-Dichlorocyclopropanation of Dicarbonyl Derivatives

scientific article published on 24 October 2019

pyPolyBuilder: Automated Preparation of Molecular Topologies and Initial Configurations for Molecular Dynamics Simulations of Arbitrary Supramolecules

scientific article published in 2021

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