List of works by Benoît Piégu

A survey of transposable element classification systems--a call for a fundamental update to meet the challenge of their diversity and complexity.

scientific article published on 20 March 2015

A unigene catalogue of 5700 expressed genes in cassava.

scientific article

An Assessment of Fixed and Native Chromatin Preparation Methods to Study Histone Post-Translational Modifications at a Whole Genome Scale in Skeletal Muscle Tissue

scientific article published on 29 August 2017

An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies

scientific article

Analysis of the transcriptional response to Rice Yellow Mottle Virus infection in Oryza sativa indica and japonica cultivars.

scientific article published on 16 October 2003

Characteristics of inteins in invertebrate iridoviruses and factors controlling insertion in their viral hosts.

scientific article published on 7 February 2013

Complete genome sequence of invertebrate iridescent virus 22 isolated from a blackfly larva

scientific article

Complete genome sequence of invertebrate iridovirus IIV-25 isolated from a blackfly larva

scientific article published on May 2014

Complete genome sequence of invertebrate iridovirus IIV22A, a variant of IIV22, isolated originally from a blackfly larva

scientific article

Complete genome sequence of invertebrate iridovirus IIV30 isolated from the corn earworm, Helicoverpa zea.

scientific article published on 3 January 2014

Deep landscape update of dispersed and tandem repeats in the genome model of the red jungle fowl, Gallus gallus, using a series of de novo investigating tools.

scientific article

DensityMap: a genome viewer for illustrating the densities of features

scientific article

Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

scientific article published on 06 December 2007

Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza.

scientific article published on 30 August 2007

Evolutionary relationships of iridoviruses and divergence of ascoviruses from invertebrate iridoviruses in the superfamily Megavirales.

scientific article

FCGR2C genotyping by pyrosequencing reveals linkage disequilibrium with FCGR3A V158F and FCGR2A H131R polymorphisms in a Caucasian population.

scientific article

High throughput T-DNA insertion mutagenesis in rice: a first step towards in silico reverse genetics.

scientific article

Identification of an active LTR retrotransposon in rice.

scientific article published on 2 February 2009

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.

scientific article

Maize Sh2 gene is constrained by natural selection but escaped domestication.

scientific article published in March 2007

Mariner Transposons Contain a Silencer: Possible Role of the Polycomb Repressive Complex 2.

scientific article

New in silico insight into the synteny between rice (Oryza sativa L.) and maize (Zea mays L.) highlights reshuffling and identifies new duplications in the rice genome

scientific article published on 01 May 2004

The future of transposable element annotation and their classification in the light of functional genomics - what we can learn from the fables of Jean de la Fontaine?

scientific article

Transposase concentration controls transposition activity: myth or reality?

scientific article published on 28 August 2013

Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data.

scientific article

Using cDNA and genomic sequences as tools to develop SNP strategies in cassava (Manihot esculenta Crantz)

scientific article published on 14 January 2005

Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae.

scientific article