List of works by Gary Muehlbauer

A Critical Assessment of 60 Years of Maize Intragenic Recombination

article

A chromosome conformation capture ordered sequence of the barley genome

scientific article

A comparative analysis of transcript abundance using SAGE and Affymetrix arrays

scientific article

A hAT superfamily transposase recruited by the cereal grass genome

scientific article published on 9 February 2006

A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits

scientific article

A model wheat cultivar for transformation to improve resistance to Fusarium Head Blight

scientific article

A new resource for cereal genomics: 22K barley GeneChip comes of age.

scientific article

A physical, genetic and functional sequence assembly of the barley genome

scientific article

A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms

scientific article published on 15 November 2013

A structured mutant population for forward and reverse genetics in Barley (Hordeum vulgare L.).

scientific article published on October 2004

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

scientific article

An Improved Consensus Linkage Map of Barley Based on Flow-Sorted Chromosomes and Single Nucleotide Polymorphism Markers

article by María Muñoz-Amatriaín et al published 2011 in The plant genome

An Induced Chromosomal Translocation in Soybean Disrupts a KASI Ortholog and Is Associated with a High-Sucrose and Low-Oil Seed Phenotype

scientific article published on 24 February 2017

An atlas of gene expression from seed to seed through barley development

article by Arnis Druka et al published 18 March 2006 in Functional and Integrative Genomics

Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ).

scientific article

Association mapping of spot blotch resistance in wild barley

scientific article

Association mapping of stem rust race TTKSK resistance in US barley breeding germplasm

scientific article

Bacterial artificial chromosome-based physical map of Gibberella zeae (Fusarium graminearum).

scientific article

Barley genetic variation: implications for crop improvement

scientific article published on 22 March 2014

Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond

scientific article

Brd1 gene in maize encodes a brassinosteroid C-6 oxidase

scientific article

Chromosome size in diploid eukaryotic species centers on the average length with a conserved boundary ⬇️

scientific article

Circular RNAs mediated by transposons are associated with transcriptomic and phenotypic variation in maize

scientific article published on 20 November 2017

Comparative transcriptomics in the Triticeae

scientific article published on 29 June 2009

Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean

scientific article

Construction of a map-based reference genome sequence for barley, Hordeum vulgare L

scientific article

Correction to: Genome-wide discovery and characterization of maize long non-coding RNAs

article

Correction: Mendelian and Non-Mendelian Regulation of Gene Expression in Maize

scientific article published on 14 February 2018

Dense genotyping-by-sequencing linkage maps of two Synthetic W7984×Opata reference populations provide insights into wheat structural diversity

scientific article published in Scientific Reports

Development and implementation of high-throughput SNP genotyping in barley

scientific article published on 4 December 2009

Development of a Fusarium graminearum Affymetrix GeneChip for profiling fungal gene expression in vitro and in planta

scientific article published on 13 March 2006

Development of a Multiparent Population for Genetic Mapping and Allele Discovery in Six-Row Barley

scientific article published on 29 July 2019

Differential transcriptomic responses to Fusarium graminearum infection in two barley quantitative trait loci associated with Fusarium head blight resistance

scientific article

Distribution, functional impact, and origin mechanisms of copy number variation in the barley genome

scientific article published on 12 June 2013

Diversity of maize shoot apical meristem architecture and its relationship to plant morphology

scientific article

ELIGULUM-A regulates lateral branch and leaf development in barley.

scientific article published on 12 February 2018

Effect of population size and unbalanced data sets on QTL detection using genome-wide association mapping in barley breeding germplasm

scientific article

Environmental Association Identifies Candidates for Tolerance to Low Temperature and Drought

scientific article published on 07 October 2019

Examining the Transcriptional Response in Wheat Near-Isogenic Lines to Infection and Deoxynivalenol Treatment

scientific article

Fast neutron-induced structural rearrangements at a soybean NAP1 locus result in gnarled trichomes

scientific article published on 09 June 2016

Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum

scientific article

Gene expression analysis of related wheat lines with contrasting levels of head blight resistance after Fusarium graminearum inoculation

article

Genetic control of morphometric diversity in the maize shoot apical meristem

scientific article

Genetic dissection of a pericentromeric region of barley chromosome 6H associated with Fusarium head blight resistance, grain protein content and agronomic traits

scientific article published in 2021

Genetics of Tillering in Rice and Barley

article

Genic and nongenic contributions to natural variation of quantitative traits in maize

scientific article

Genome-Wide Association Mapping of Stem Rust Resistance in Hordeum vulgare subsp. spontaneum

scientific article

Genome-wide SNPs and re-sequencing of growth habit and inflorescence genes in barley: implications for association mapping in germplasm arrays varying in size and structure

scientific article

Genome-wide discovery and characterization of maize long non-coding RNAs.

scientific article

Genome-wide recombination dynamics are associated with phenotypic variation in maize

scientific article published on 31 December 2015

Haplotype diversity and population structure in cultivated and wild barley evaluated for Fusarium head blight responses

scientific article

INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1.

scientific article

Intragenic Meiotic Crossovers Generate Novel Alleles with Transgressive Expression Levels

scientific article published on 01 November 2018

Major chromosome 5H haplotype switch structures the European two-rowed spring barley germplasm of the past 190 years

scientific article published in 2023

Mapping malting quality and yield characteristics in a north American two-rowed malting barley × wild barley advanced backcross population

scientific article published in 2019

Marker-trait associations in Virginia Tech winter barley identified using genome-wide mapping

scientific article published on 9 November 2012

Mendelian and non-Mendelian regulation of gene expression in maize

scientific article

Meta‐analysis of the genetics of resistance to <i>Fusarium</i> head blight and deoxynivalenol accumulation in barley and considerations for breeding

scientific article published in 2023

Multiple wheat genomes reveal global variation in modern breeding

scientific article published on 25 November 2020

Natural Genetic Variation Underlying Tiller Development in Barley (Hordeum vulgare L)

scientific article published on 09 April 2020

Ontogeny of the maize shoot apical meristem

scientific article

Overexpression of defense response genes in transgenic wheat enhances resistance to Fusarium head blight

scientific article

Overexpression of the maize Teosinte Branched1 gene in wheat suppresses tiller development

scientific article

Patterns of polymorphism and linkage disequilibrium in cultivated barley ⬇️

scientific article published on November 13, 2010

Phenotypic and genomic analyses of a fast neutron mutant population resource in soybean

scientific article published on 14 February 2011

Population structure and linkage disequilibrium in elite barley breeding germplasm from the United States

scientific article

Quantitative trait loci conferring resistance to Fusarium head blight in barley respond differentially to Fusarium graminearum infection ⬇️

scientific article published on September 24, 2010

RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome

scientific article (publication date: 5 August 2010)

Radial leaves of the maize mutant ragged seedling2 retain dorsiventral anatomy

scientific article

Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome

scientific article published on 07 August 2015

Shifting the limits in wheat research and breeding using a fully annotated reference genome

scientific article

Shoot and Inflorescence Architecture

scholarly article published 2014

Single-feature polymorphism discovery by computing probe affinity shape powers

scientific article

Soil–Occupancy Effects of Invasive and Native Grassland Plant Species on Composition and Diversity of Mycorrhizal Associations

article

TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools

scientific article published on 18 December 2019

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization

scientific article

The Hordeum Toolbox: The Barley Coordinated Agricultural Project Genotype and Phenotype Resource

article

The USDA barley core collection: genetic diversity, population structure, and potential for genome-wide association studies

scientific article

The barley UNICULM2 gene resides in a centromeric region and may be associated with signaling and stress responses

scientific article

The barley Uniculme4 gene encodes a BLADE-ON-PETIOLE-like protein that controls tillering and leaf patterning

scientific article published on 27 March 2015

The emergence of whole genome association scans in barley

scientific article published on April 2009

The genetics of barley low-tillering mutants: absent lower laterals (als).

scientific article published on 25 February 2009

The genetics of barley low-tillering mutants: low number of tillers-1 (lnt1).

scientific article published on 21 April 2010

The international barley sequencing consortium--at the threshold of efficient access to the barley genome.

scientific article published in January 2009

Transcriptome analysis and physical mapping of barley genes in wheat-barley chromosome addition lines

scientific article

Transcriptome analysis of a barley breeding program examines gene expression diversity and reveals target genes for malting quality improvement ⬇️

scientific article published on November 23, 2010

Transcriptome analysis of a wheat near-isogenic line pair carrying Fusarium head blight-resistant and -susceptible alleles

scientific article published in November 2009

Transcriptome analysis of the barley-deoxynivalenol interaction: evidence for a role of glutathione in deoxynivalenol detoxification

scientific article published in July 2010

Transcriptome analysis of trichothecene-induced gene expression in barley

scientific article

Transgenic Wheat Expressing a Barley UDP-Glucosyltransferase Detoxifies Deoxynivalenol and Provides High Levels of Resistance to Fusarium graminearum

scientific article published on 27 July 2015

Transgenic wheat expressing a barley class II chitinase gene has enhanced resistance against Fusarium graminearum

scientific article published on 7 May 2008

Two genomic regions contribute disproportionately to geographic differentiation in wild barley

scientific article published on 22 April 2014

Validation of a candidate deoxynivalenol-inactivating UDP-glucosyltransferase from barley by heterologous expression in yeast

scientific article published in July 2010

Whole-genome association mapping in elite inbred crop varieties

scientific article

Zearalenone-16-O-glucoside: a new masked mycotoxin

scientific article

eQTL Networks Reveal Complex Genetic Architecture in the Immature Soybean Seed

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