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List of works by Tom Blundell

1.15 A crystal structure of the X. tropicalis Spred1 EVH1 domain suggests a fourth distinct peptide-binding mechanism within the EVH1 family.

scientific article published in February 2005

18th Sir Hans Krebs lecture. Knowledge-based protein modelling and design

scientific article published on March 1988

A 2.3 A resolution structure of chymosin complexed with a reduced bond inhibitor shows that the active site beta-hairpin flap is rearranged when compared with the native crystal structure

scientific article

A base measure of precision for protein stability predictors: structural sensitivity

scientific article published on 25 February 2021

A computer graphics model of frog gamma-crystallin based on the three-dimensional structure of calf gamma-II crystallin

scientific article published on 01 November 1986

A database of globular protein structural domains: clustering of representative family members into similar folds

scientific article

A formal discussion of the archival journal requirements for data deposition

scientific article published on 01 February 1996

A fragment merging approach towards the development of small molecule inhibitors of Mycobacterium tuberculosis EthR for use as ethionamide boosters

scientific article published on 25 January 2016

A monomeric insulin from the casiragua: molecular model building using computer graphics

scientific article published on 01 June 1981

A monomeric insulin from the porcupine (Hystrix cristata), an Old World hystricomorph

scientific article published on 01 August 1980

A new crystal form of the NK1 splice variant of HGF/SF demonstrates extensive hinge movement and suggests that the NK1 dimer originates by domain swapping

scientific article

A novel exhaustive search algorithm for predicting the conformation of polypeptide segments in proteins

scientific article published in July 2000

A novel superfamily of enzymes that catalyze the modification of guanidino groups.

scientific article published on August 2001

A novel type of deubiquitinating enzyme

scientific article (publication date: 20 June 2003)

A pentameric form of human serum amyloid P component. Crystallization, X-ray diffraction and neutron scattering studies

scientific article published on 01 July 1988

A six-stranded double-psi beta barrel is shared by several protein superfamilies.

scientific article

A structural bioinformatics approach to the analysis of nonsynonymous single nucleotide polymorphisms (nsSNPs) and their relation to disease.

scientific article published in December 2007

A structure-guided approach to inhibition of HGF/SF–MET interactions

article

A study of the interactions between residues in the C-terminal half of calmodulin by one and two-dimensional NMR methods and computer modelling

scientific article published on 01 September 1984

A third fibronectin type III domain in the extracellular region of the insulin receptor family

scientific article published on 01 December 1998

A three-dimensional model of the Photosystem II reaction centre of Pisum sativum

scientific article published in November 1992

A variable gap penalty function and feature weights for protein 3-D structure comparisons ⬇️

scientific article published on January 1, 1992

ATP half-sites in RadA and RAD51 recombinases bind nucleotides

scientific article published on 6 April 2016

Ab initio construction of polypeptide fragments: Accuracy of loop decoy discrimination by an all-atom statistical potential and the AMBER force field with the Generalized Born solvation model

scientific article published in April 2003

Ab initio construction of polypeptide fragments: efficient generation of accurate, representative ensembles

scientific article published in April 2003

Achieving high signal-to-noise in cell regulatory systems: Spatial organization of multiprotein transmembrane assemblies of FGFR and MET receptors.

scientific article published on 5 May 2015

Achieving selectivity in space and time with DNA double-strand-break response and repair: molecular stages and scaffolds come with strings attached ⬇️

Adaptation of plasminogen activator sequences to known protease structures

scientific article published on 01 July 1983

Advances in the uses of synchrotron X-ray and proton beams in structural biology

scientific article published in October 2005

Advantages of fine-grained side chain conformer libraries

scientific article published in December 2003

Alignment and searching for common protein folds using a data bank of structural templates

scientific article

An algorithm for predicting protein-protein interaction sites: Abnormally exposed amino acid residues and secondary structure elements

scientific article published in May 2006

An analysis of subdomain orientation, conformational change and disorder in relation to crystal packing of aspartic proteinases

scientific article

An analysis of the periodicity of conserved residues in sequence alignments of G-protein coupled receptors. Implications for the three-dimensional structure

scientific article published on 01 July 1989

An aspartic proteinase from flowers of Centaurea calcitrapa. Purification, characterization, molecular cloning, and modelling of its three-dimensional structure

scientific article published on January 1, 1998

An assessment of COMPOSER: a rule-based approach to modelling protein structure

scientific article

An automatic method involving cluster analysis of secondary structures for the identification of domains in proteins

scientific article

An evaluation of the performance of an automated procedure for comparative modelling of protein tertiary structure

scientific article published on July 1993

An integrated computational approach can classify VHL missense mutations according to risk of clear cell renal carcinoma.

scientific article published on 26 June 2014

An iterative structure-assisted approach to sequence alignment and comparative modeling

An iterative structure-assisted approach to sequence alignment and comparative modeling.

scientific article published in January 1999

Analysis and prediction of inter-strand packing distances between beta-sheets of globular proteins.

scientific article

Analysis of HGD Gene Mutations in Patients with Alkaptonuria from the United Kingdom: Identification of Novel Mutations

scientific article

Analysis of conservation and substitutions of secondary structure elements within protein superfamilies

scientific article published in December 2000

Analysis of interactive packing of secondary structural elements in alpha/beta units in proteins

scientific article

Analysis of the interaction between human steroid 21-hydroxylase and various monoclonal antibodies using comparative structural modelling

scientific article published in December 2005

Analysis of the thyrotropin receptor-thyrotropin interaction by comparative modeling

scientific article

Analysis, clustering and prediction of the conformation of short and medium size loops connecting regular secondary structures ⬇️

scientific article published on January 1, 1996

Andante: reducing side-chain rotamer search space during comparative modeling using environment-specific substitution probabilities

scientific article published on 6 March 2007

Anisotropic thermal motion and polypeptide secondary structure studied by X-ray analysis at 0.98A resolution

scientific article published on 01 January 1985

Application of fragment growing and fragment linking to the discovery of inhibitors of Mycobacterium tuberculosis pantothenate synthetase

scientific article

Archival journal requirements for data deposition

scientific article published in June 1996

Archival journal requirements of macromolecular crystallographic data

scientific article published on 01 February 1996

Arginine-deprivation-induced oxidative damage sterilizes

scientific article

Arpeggio: A Web Server for Calculating and Visualising Interatomic Interactions in Protein Structures

scientific article

Asymmetry in the Multiprotein Systems of Molecular Biology

scholarly article by Tom Blundell published in January 2015

Atomic Positions in Rhombohedral 2-Zinc Insulin Crystals ⬇️

scientific article published on June 25, 1971

Atomic interactions and profile of small molecules disrupting protein-protein interfaces: the TIMBAL database.

scientific article published in November 2009

Automated comparative modelling of protein structures

scientific article published on August 1994

BIPA: a database for protein-nucleic acid interaction in 3D structures

scientific article published on 8 April 2009

BUB1 and BUBR1: multifaceted kinases of the cell cycle

scientific article published on 15 October 2010

Biophysical and computational fragment-based approaches to targeting protein–protein interactions: applications in structure-guided drug discovery ⬇️

scientific article published on September 13, 2012

Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure

scientific article published in June 2000

CAMPASS: a database of structurally aligned protein superfamilies ⬇️

scientific article published on September 15, 1998

CHOPIN: a web resource for the structural and functional proteome of Mycobacterium tuberculosis

scientific article published on 31 March 2015

CHORAL: a differential geometry approach to the prediction of the cores of protein structures

scientific article published on 26 July 2005

CODA: a combined algorithm for predicting the structurally variable regions of protein models.

scientific article

CREDO: a protein-ligand interaction database for drug discovery

scientific article published in February 2009

CREDO: a structural interactomics database for drug discovery ⬇️

scientific article published on July 18, 2013

Calculated tyrosyl circular dichroism of proteins: absence of tryptophan and cystine interferences in avian pancreatic polypeptide

scientific article published on 01 March 1982

Carbonyl-carbonyl interactions stabilize the partially allowed Ramachandran conformations of asparagine and aspartic acid

scientific article published in December 1999

Catching a common fold

scientific article published on June 1993

Cell biology: brief encounters bolster contacts.

scientific article

Characteristics of a human monoclonal autoantibody to the thyrotropin receptor: sequence structure and function

scientific article

Characteristics of a monoclonal antibody to the thyrotropin receptor that acts as a powerful thyroid-stimulating autoantibody antagonist

scientific article published in July 2005

Characterization and modelling of VanT: a novel, membrane-bound, serine racemase from vancomycin-resistant Enterococcus gallinarum BM4174.

scientific article

Characterization of spindle checkpoint kinase Mps1 reveals domain with functional and structural similarities to tetratricopeptide repeat motifs of Bub1 and BubR1 checkpoint kinases

scientific article published on 20 December 2011

Characterization of symmetric complexes of nerve growth factor and the ectodomain of the pan-neurotrophin receptor, p75NTR

scientific article published on 11 July 2005

Chemistry, structure and function of insulin and related hormones. A report on the 2nd International Insulin Symposium, Aachen, Germany, 4--7 September 1979.

scientific article published in January 1980

Chimeric glycosyltransferases for the generation of hybrid glycopeptides

scientific article

Cleavage Efficiency of the Novel Aspartic Protease Yapsin 1 (Yap3p) Enhanced for Substrates with Arginine Residues Flanking the P1 Site: Correlation with Electronegative Active-Site Pockets Predicted by Molecular Modeling, ⬇️

scientific article published on March 3, 1998

Cloning of mouse ptx3, a new member of the pentraxin gene family expressed at extrahepatic sites

scientific article

Cloning, expression, purification and preliminary crystallographic analysis of the short-chain dehydrogenase enzymes WbmF, WbmG and WbmH from Bordetella bronchiseptica

scientific article published on 28 July 2007

Cockroach allergen Bla g 2: structure, function, and implications for allergic sensitization.

scientific article

Combining in silico protein stability calculations with structure-function relationships to explore the effect of polymorphic variation on cytochrome P450 drug metabolism.

scientific article

Comparative Analysis of Protein Three-Dimensional Structures and an Approach to the Inverse Folding Problem ⬇️

scientific article published on January 1, 1991

Comparative analyses of pentraxins: implications for protomer assembly and ligand binding

scientific article published on 01 November 1994

Comparative analysis of the Escherichia coli ketopantoate hydroxymethyltransferase crystal structure confirms that it is a member of the (betaalpha)8 phosphoenolpyruvate/pyruvate superfamily

scientific article published on July 2003

Comparative analysis of the regions binding beta gamma-subunits in Galpha and PH domains

scientific article published on 01 March 1996

Comparative modelling and analysis of amino acid substitutions suggests that the family of pregnancy-associated glycoproteins includes both active and inactive aspartic proteinases

scientific article published in October 1996

Comparative modelling by restraint-based conformational sampling

scientific article

Comparative modelling of barley-grain aspartic proteinase: A structural rationale for observed hydrolytic specificity

scientific article

Comparative protein modelling by satisfaction of spatial restraints

scientific article (publication date: 5 December 1993)

Comparison of solvent-inaccessible cores of homologous proteins: definitions useful for protein modelling

article

Comparisons of the Sequences, 3-D Structures and Mechanisms of Pepsin-Like and Retroviral Aspartic Proteinases ⬇️

scientific article published on 01 January 1991

Comparisons of the three-dimensional structures, specificities and glycosylation of renins, yeast proteinase A and cathepsin D.

scientific article published on January 1995

Comprehensive, atomic-level characterization of structurally characterized protein-protein interactions: the PICCOLO database ⬇️

scientific article published on July 29, 2011

Computational saturation mutagenesis to predict structural consequences of systematic mutations in the beta subunit of RNA polymerase in Mycobacterium leprae

scientific article published on 17 January 2020

Computer graphics modelling of human renin. Specificity, catalytic activity and intron-exon junctions

scientific article published on 01 August 1984

Conformation of beta-hairpins in protein structures. A systematic classification with applications to modelling by homology, electron density fitting and protein engineering

scientific article (publication date: 20 April 1989)

Conformation of β-hairpins in protein structures

article published in 1989

Conformational analysis and clustering of short and medium size loops connecting regular secondary structures: a database for modeling and prediction

scientific article

Conformational flexibility in a small globular hormone: x-ray analysis of avian pancreatic polypeptide at 0.98-A resolution

scientific article

Conformational studies of polypeptide growth factors: IGF and NGF

scientific article published on 01 January 1982

Conformational studies on the pancreatic polypeptide hormone family

scientific article published in July 1984

Conformer generation under restraints

scientific article

Cooperative dimerization of fibroblast growth factor 1 (FGF1) upon a single heparin saccharide may drive the formation of 2:2:1 FGF1.FGFR2c.heparin ternary complexes

scientific article

Cooperative heparin-mediated oligomerization of fibroblast growth factor-1 (FGF1) precedes recruitment of FGFR2 to ternary complexes.

scientific article

Correction for Arora et al., "Respiratory Flexibility in Response to Inhibition of Cytochrome c Oxidase in Mycobacterium tuberculosis".

scientific article published on 24 August 2017

Coupling growth-factor engineering with nanotechnology for therapeutic angiogenesis.

scientific article

Coypu insulin. Primary structure, conformation and biological properties of a hystricomorph rodent insulin

scientific article published on September 1986

Crystal Structure of Escherichia coli Ketopantoate Reductase at 1.7 Å Resolution and Insight into the Enzyme Mechanism ⬇️

scientific article published on December 4, 2001

Crystal structure analysis of deamino-oxytocin: conformational flexibility and receptor binding

scientific article

Crystal structure of DNA-PKcs reveals a large open-ring cradle comprised of HEAT repeats

scientific article

Crystal structure of Escherichia coli enterobactin-specific isochorismate synthase (EntC) bound to its reaction product isochorismate: implications for the enzyme mechanism and differential activity of chorismate-utilizing enzymes

scientific article

Crystal structure of Escherichia coli ketopantoate reductase in a ternary complex with NADP+ and pantoate bound: substrate recognition, conformational change, and cooperativity

scientific article

Crystal structure of [Leu5]enkephalin

scientific article published on July 1979

Crystal structure of an Xrcc4-DNA ligase IV complex

scientific article

Crystal structure of an enzyme displaying both inositol-polyphosphate-1-phosphatase and 3'-phosphoadenosine-5'-phosphate phosphatase activities: a novel target of lithium therapy

scientific article

Crystal structure of aspartate decarboxylase at 2.2 A resolution provides evidence for an ester in protein self-processing

scientific article

Crystal structure of fibroblast growth factor receptor ectodomain bound to ligand and heparin

scientific article

Crystal structure of folliculin reveals a hidDENN function in genetically inherited renal cancer ⬇️

scientific article published on August 1, 2012

Crystal structure of human XLF/Cernunnos reveals unexpected differences from XRCC4 with implications for NHEJ

scientific article

Crystal structure of rat liver betaine homocysteine s-methyltransferase reveals new oligomerization features and conformational changes upon substrate binding

scientific article

Crystal structure of the NK1 fragment of HGF/SF suggests a novel mode for growth factor dimerization and receptor binding

scientific article

Crystal structure of the TSH receptor in complex with a thyroid-stimulating autoantibody

scientific article

Crystal structure of the beta-chain of human hepatocyte growth factor-like/macrophage stimulating protein

scientific article published in November 2005

Crystal structure of the complex of the cyclin D-dependent kinase Cdk6 bound to the cell-cycle inhibitor p19INK4d

scientific article

Crystal structure of the pleckstrin homology domain from dynamin

scientific article

Crystal structures of NK1-heparin complexes reveal the basis for NK1 activity and enable engineering of potent agonists of the MET receptor.

scientific article

Crystal structures of Yersinia enterocolitica salicylate synthase and its complex with the reaction products salicylate and pyruvate

scientific article published on 11 January 2006

Crystal structures of the PLP- and PMP-bound forms of BtrR, a dual functional aminotransferase involved in butirosin biosynthesis

scientific article published on 01 October 2006

Crystallisation and preliminary crystallographic data of a porcine neurophysin I-Tyr-Phe-NH2 complex

scientific article published on November 1980

Crystallization and X-ray analysis of the Y75N mutant of Mucor pusillus pepsin complexed with inhibitor

scientific article published on 23 March 2004

Crystallization and characterization of the high molecular weight form of nerve growth factor (7 S NGF).

scientific article

Crystallization and preliminary X-ray analysis of complexes of peptide inhibitors with human recombinant and mouse submandibular renins

scientific article

Crystallization and preliminary X-ray investigation of Escherichia coli porphobilinogen deaminase

scientific article published on 01 March 1992

Crystallization and preliminary X-ray study of recombinant betaine-homocysteine S-methyltransferase from rat liver.

scientific article published on 23 August 2002

Crystallization and preliminary crystallographic characterization of aspartic proteinase-A from baker's yeast and its complexes with inhibitors

scientific article published on 01 July 1993

Crystallization and preliminary x-ray diffraction studies on met-myoglobin from Aplysia limacina

scientific article published on October 1975

Crystallographic data deposition

scientific article

Crystallographic refinement by knowledge-based exploration of complex energy landscapes

scientific article published in September 2005

Crystallographic studies of reduced bond inhibitors complexed with an aspartic proteinase

scientific article published in January 1987

DDBASE2.0: updated domain database with improved identification of structural domains

scientific article

DNA-PKcs structure suggests an allosteric mechanism modulating DNA double-strand break repair

scientific article published on 2 February 2017

DNA-PKcs, Allostery, and DNA Double-Strand Break Repair: Defining the Structure and Setting the Stage.

scientific article

DUET: a server for predicting effects of mutations on protein stability using an integrated computational approach.

scientific article published on 14 May 2014

Decoding the similarities and differences among mycobacterial species.

scientific article published on 30 August 2017

Defining the Molecular Basis of BubR1 Kinetochore Interactions and APC/C-CDC20 Inhibition

scientific article

Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming

scientific article

Deposition of macromolecular data

scientific article published on 01 May 1996

Design and structural analysis of aromatic inhibitors of type II dehydroquinase from Mycobacterium tuberculosis

scientific article

Designing inhibitors of the metalloproteinase superfamily: comparative analysis of representative structures

scientific article published on 01 April 1996

Developing Antagonists for the Met-HGF/SF Protein-Protein Interaction Using a Fragment-Based Approach.

scientific article published on 28 December 2015

Different DNA End Configurations Dictate Which NHEJ Components Are Most Important for Joining Efficiency.

scientific article published on 04 October 2016

Diffraction data deposition

scientific article published on 01 February 1996

Dimers of DNA-PK create a stage for DNA double-strand break repair

scientific article published on 19 October 2020

Direct observation by X‐ray analysis of the tetrahedral “intermediate” of aspartic proteinases ⬇️

scientific article published on March 1, 1992

Discarding functional residues from the substitution table improves predictions of active sites within three-dimensional structures

scientific article

Discovery of Schaeffer's acid analogues as lead structures of mycobacterium tuberculosis type II dehydroquinase using a rational drug design approach.

scientific article published on 21 November 2012

Discrete restraint-based protein modeling and the Calpha-trace problem

scientific article published on September 2003

Disruption of the low affinity receptor-binding site in NGF allows neuronal survival and differentiation by binding to the trk gene product ⬇️

scientific article published on April 17, 1992

Dissection of DNA double-strand-break repair using novel single-molecule forceps ⬇️

scientific article published on 21 May 2018

Distinguishing structural and functional restraints in evolution in order to identify interaction sites

scientific article published in October 2004

Does a more precise chemical description of protein-ligand complexes lead to more accurate prediction of binding affinity?

scientific article published on 20 February 2014

Dogfish insulin. Primary structure, conformation and biological properties of an elasmobranchial insulin

scientific article published on 01 October 1983

Domain Structure of Hepatocyte Growth Factor/Scatter Factor (HGF/SF) ⬇️

scientific article published on January 1, 1997

Domain flexibility in aspartic proteinases

scientific article

Dynamic control of Rad51 recombinase by self-association and interaction with BRCA2

scientific article (publication date: October 2003)

Editorial

scientific article published on 18 February 2020

Editorial overview: Macromolecular assemblies

scientific article published on 09 March 2020

Efficient restraints for protein-protein docking by comparison of observed amino acid substitution patterns with those predicted from local environment

scientific article

Energy calculations on aspartic proteinases: human renin, endothiapepsin and its complex with an angiotensinogen fragment analogue, H-142.

scientific article

Engineering archeal surrogate systems for the development of protein-protein interaction inhibitors against human RAD51

scientific article

Enriching the annotation of Mycobacterium tuberculosis H37Rv proteome using remote homology detection approaches: insights into structure and function.

scientific article

Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds

scientific article published on February 1992

Epidermal growth factor binding induces a conformational change in the external domain of its receptor

scientific article

Essential but not vulnerable: indazole sulfonamides targeting inosine monophosphate dehydrogenase as potential leads against Mycobacterium tuberculosis

scientific article

Evidence that heparin saccharides promote FGF2 mitogenesis through two distinct mechanisms

scientific article

Evolution and the tertiary structure of proteins

scientific article published on January 1984

Evolution in the insulin family: molecular clocks that tell the wrong time

scientific article published on January 1984

Evolutionary and functional relationships between the basic and acidic beta-crystallins

scientific article

Evolutionary trace analysis of TGF-beta and related growth factors: implications for site-directed mutagenesis.

scientific article published on December 2000

Exploration of subsite binding specificity of human cathepsin D through kinetics and rule-based molecular modeling

scientific article

Exploring the binding preferences/specificity in the active site of human cathepsin E.

scientific article published in June 1995

Exploring the chemical space of the lysine-binding pocket of the first kringle domain of hepatocyte growth factor/scatter factor (HGF/SF) yields a new class of inhibitors of HGF/SF-MET binding

article

Expression and purification of recombinant human fibroblast growth factor receptor in Escherichia coli

scientific article published on 27 April 2006

Eye-lens proteins: the three-dimensional structure of beta-crystallin predicted from monomeric gamma-crystallin

scientific article published on 01 October 1981

FSH and TSH binding to their respective receptors: similarities, differences and implication for glycoprotein hormone specificity

scientific article published on 07 July 2008

FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties

scientific article (publication date: 29 June 2001)

Fibroblast growth factor receptors: lessons from the genes

scientific journal article

Flexibility and small pockets at protein-protein interfaces: New insights into druggability.

scientific article published on 7 February 2015

Four-fold structural repeat in the acid proteases ⬇️

scientific article published on September 29, 1979

Fragment Screening against the EthR-DNA Interaction by Native Mass Spectrometry.

scientific article published on 17 May 2017

Fragment ranking in modelling of protein structure. Conformationally constrained environmental amino acid substitution tables.

scientific article

Fragment-Based Approach to Targeting Inosine-5'-monophosphate Dehydrogenase (IMPDH) from Mycobacterium tuberculosis

scientific article

Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays

scientific article

Frog lens beta A1-crystallin: the nucleotide sequence of the cloned cDNA and computer graphics modelling of the three-dimensional structure.

scientific article published in November 1987

From comparisons of protein sequences and structures to protein modelling and design

scientific article published on June 1990

Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2

scientific article

Functional map and domain structure of MET, the product of the c- met protooncogene and receptor for hepatocyte growth factor/scatter factor ⬇️

scientific article published on October 3, 2003

Functional restraints on the patterns of amino acid substitutions: Application to sequence-structure homology recognition

scientific article published on 01 December 2005

Functional specificity of the Xenopus T-domain protein Brachyury is conferred by its ability to interact with Smad1.

scientific article published in April 2005

Gene and protein structure of a beta-crystallin polypeptide in murine lens: relationship of exons and structural motifs

scientific article

Genome bioinformatic analysis of nonsynonymous SNPs

scientific article

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains

scientific article

Genome3D: exploiting structure to help users understand their sequences

scientific article

Genomes, structural biology and drug discovery: combating the impacts of mutations in genetic disease and antibiotic resistance.

scientific article published on April 2017

Germline Mutations in the CDKN2B Tumor Suppressor Gene Predispose to Renal Cell Carcinoma.

scientific article

Getting knotted: a model for the structure and activation of Spätzle.

scientific article

HAD, a data bank of heavy-atom binding sites in protein crystals: a resource for use in multiple isomorphous replacement and anomalous scattering

scientific article

HOMSTRAD: a database of protein structure alignments for homologous families

scientific article

HOMSTRAD: adding sequence information to structure-based alignments of homologous protein families.

scientific article published in August 2001

Heterogeneity and inaccuracy in protein structures solved by X-ray crystallography.

scientific article

High resolution X-ray analyses of renin inhibitor-aspartic proteinase complexes

scientific article

High resolution structure of an oligomeric eye lens beta-crystallin. Loops, arches, linkers and interfaces in beta B2 dimer compared to a monomeric gamma-crystallin

scientific article published on 01 December 1991

High-resolution X-ray diffraction study of the complex between endothiapepsin and an oligopeptide inhibitor: the analysis of the inhibitor binding and description of the rigid body shift in the enzyme

scientific article

High-resolution crystal structure of the human Notch 1 ankyrin domain

scientific article

High-throughput X-ray crystallography for drug discovery

scientific article published in October 2004

High-throughput crystallography for lead discovery in drug design.

scientific article

Homology among acid proteases: comparison of crystal structures at 3A resolution of acid proteases from Rhizopus chinensis and Endothia parasitica ⬇️

scientific article published on February 1, 1977

Hormone and anti-hormone action at the target cell

journal article; published in Nature on 1976-3

Hormone families: pancreatic hormones and homologous growth factors ⬇️

scientific article published on October 30, 1980

Hotspots API: A Python Package for the Detection of Small Molecule Binding Hotspots and Application to Structure-Based Drug Design

scientific article published on 02 April 2020

Humanised monomeric RadA in complex with 2-amino benzothiazole

scientific article published on 6 February 2013

Humanised monomeric RadA in complex with 4-methylester indole

scientific article published on 6 February 2013

Humanised monomeric RadA in complex with 5-hydroxy indole

scientific article published on 6 February 2013

Humanised monomeric RadA in complex with 5-methyl indole

scientific article published on 6 February 2013

Humanised monomeric RadA in complex with FHTA tetrapeptide

scientific article published on 27 February 2013

Humanised monomeric RadA in complex with L-methylester tryptophan

scientific article published on 6 February 2013

Humanised monomeric RadA in complex with indazole

scientific article published on 6 February 2013

Humanised monomeric RadA in complex with napht-1-ol

scientific article published on 6 February 2013

Humanised monomeric RadA in complex with napht-2-ol

scientific article published on 6 February 2013

Identification and Characterization of Genetic Determinants of Isoniazid and Rifampicin Resistance in Mycobacterium tuberculosis in Southern India

scientific article published on 16 July 2019

Identification of DNA-PK in the arthropods. Evidence for the ancient ancestry of vertebrate non-homologous end-joining

scientific article published in January 2004

Identification of new allosteric sites and modulators of AChE through computational and experimental tools.

scientific article published in December 2018

Identification of the autophosphorylation sites and characterization of their effects in the protein kinase DYRK1A

scientific article

Identifying Interactions that Determine Fragment Binding at Protein Hotspots.

scientific article published on 4 April 2016

Identifying interaction motifs in CK2beta--a ubiquitous kinase regulatory subunit

scientific article

In silico functional dissection of saturation mutagenesis: Interpreting the relationship between phenotypes and changes in protein stability, interactions and activity.

scientific article

Incorporating knowledge-based biases into an energy-based side-chain modeling method: application to comparative modeling of protein structure.

scientific article

Inhibiting Mycobacterium tuberculosis CoaBC by targeting an allosteric site

scientific article published on 08 January 2021

Inhibition ofMycobacterium tuberculosisPantothenate Synthetase by Analogues of the Reaction Intermediate

scientific article

Inhibitors of aspartic proteinases and their relevance to the design of antihypertensive agents

scientific article published on 01 August 1987

Innate immunity. A Spaetzle-like role for nerve growth factor β in vertebrate immunity to Staphylococcus aureus

scientific article

Insights into DNA recombination from the structure of a RAD51-BRCA2 complex

scientific article

Insights into the structure of hepatocyte growth factor/scatter factor (HGF/SF) and implications for receptor activation.

scientific article published in June 1998

Insulin polymorphism: some physical and biological properties of rat insulins

scientific article published on 01 February 1978

Insulin-like growth factor: a model for tertiary structure accounting for immunoreactivity and receptor binding ⬇️

scientific article published on January 1, 1978

Integrated biophysical approach to fragment screening and validation for fragment-based lead discovery

scientific article

Interaction of the p85 subunit of PI 3-kinase and its N-terminal SH2 domain with a PDGF receptor phosphorylation site: structural features and analysis of conformational changes ⬇️

scientific article published on December 1, 1992

Interactions of protein kinase CK2 subunits

scientific article published on 01 January 1999

International Seminar-cum-School on Macromolecular Crystallographic Data at Calcutta, India

scientific article published on 01 March 1996

Is one solution good enough?

scientific article published on 01 March 2006

Is the evolution of insulin Darwinian or due to selectively neutral mutation? ⬇️

scientific article published on September 18, 1975

JOY: protein sequence-structure representation and analysis.

scientific article

Knowledge based modelling of homologous proteins, Part I: Three-dimensional frameworks derived from the simultaneous superposition of multiple structures

scientific article published on 01 October 1987

Knowledge based modelling of homologous proteins, Part II: Rules for the conformations of substituted sidechains

scientific article published on October 1987

Knowledge-Based Protein Modeling

scientific article (publication date: 1994)

Knowledge-based prediction of protein structures and the design of novel molecules

scientific article

Knowledge-based real-space explorations for low-resolution structure determination.

scientific article

Leaving the structured world of Oxford ⬇️

scientific article published on July 1, 1998

Macromolecules and medicine

scientific article published in Nature

Meet me halfway: when genomics meets structural bioinformatics

scientific article

Metalloproteinase super–families and drug design ⬇️

scientific article published on 01 February 1994

Microcrystals of the beta 1 isoenzyme of protein kinase C: an electron microscopic study

scientific article published on March 1994

Model-building strategies for low-resolution X-ray crystallographic data

scientific article

Modeling alpha-helical transmembrane domains: the calculation and use of substitution tables for lipid-facing residues

scientific article published on January 1993

Modelling of the lignin peroxidase LIII of Phlebia radiata: use of a sequence template generated from a 3-D structure

scientific article published on February 1993

Molecular Mechanism of SSR128129E, an Extracellularly Acting, Small-Molecule, Allosteric Inhibitor of FGF Receptor Signaling

Molecular anatomy: phyletic relationships derived from three-dimensional structures of proteins

scientific article published on 01 January 1990

Molecular dissection of the interaction between the small G proteins Rac1 and RhoA and protein kinase C-related kinase 1 (PRK1)

scientific article

Molecular evolution and domain structure of plasminogen-related growth factors (HGF/SF and HGF1/MSP)

scientific article published on December 1994

Molecular mechanism of SSR128129E, an extracellularly acting, small-molecule, allosteric inhibitor of FGF receptor signaling

scientific article

Molecular modeling of renin inhibitor P2 substituents

scientific article published on 01 January 1991

Molecular recognition in protein families: a database of aligned three-dimensional structures of related proteins

scientific article published on 01 August 1993

Multidisciplinary cycles for protein engineering: site-directed mutagenesis and X-ray structural studies of aspartic proteinases

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The TRANSPARENT TESTA GLABRA1 Locus, Which Regulates Trichome Differentiation and Anthocyanin Biosynthesis in Arabidopsis, Encodes a WD40 Repeat Protein

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The TRANSPARENT TESTA GLABRA1 locus, which regulates trichome differentiation and anthocyanin biosynthesis in Arabidopsis, encodes a WD40 repeat protein

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X-ray analysis (1. 4-A resolution) of avian pancreatic polypeptide: Small globular protein hormone

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X-ray analysis and the structure of insulin

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X-ray analysis at 2.0 A resolution of mouse submaxillary renin complexed with a decapeptide inhibitor CH-66, based on the 4-16 fragment of rat angiotensinogen

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X-ray analysis of HIV-1 proteinase at 2.7 A resolution confirms structural homology among retroviral enzymes

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X-ray structure of yeast Hal2p, a major target of lithium and sodium toxicity, and identification of framework interactions determining cation sensitivity

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pH-tuneable binding of 2′-phospho-ADP-ribose to ketopantoate reductase: a structural and calorimetric study

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pkCSM: Predicting Small-Molecule Pharmacokinetic and Toxicity Properties Using Graph-Based Signatures.

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pyDock: electrostatics and desolvation for effective scoring of rigid-body protein-protein docking

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