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List of works by Cheryl R Kuske

A new fungal large subunit ribosomal RNA primer for high-throughput sequencing surveys

scientific article published on 9 December 2015

Acidobacteria phylum sequences in uranium-contaminated subsurface sediments greatly expand the known diversity within the phylum

scientific article

Assembly of Active Bacterial and Fungal Communities Along a Natural Environmental Gradient

scientific article published on 18 August 2015

Bacillus anthracis pXO1 plasmid sequence conservation among closely related bacterial species

scientific article

Bacterial, fungal, and plant communities exhibit no biomass or compositional response to two years of simulated nitrogen deposition in a semiarid grassland

scientific article published on 24 January 2017

Biocrusts in the Context of Global Change

scientific article published in 2016

Biological consequences of ancient gene acquisition and duplication in the large genome of Candidatus Solibacter usitatus Ellin6076

scientific article published in 2011

Changes in Fungal Community Composition in Response to Elevated Atmospheric CO2 and Nitrogen Fertilization Varies with Soil Horizon

scientific article

Changes in nitrogen-fixing and ammonia-oxidizing bacterial communities in soil of a mixed conifer forest after wildfire

scientific article

Chronic Physical Disturbance Substantially Alters the Response of Biological Soil Crusts to a Wetting Pulse, as Characterized by Metatranscriptomic Sequencing

scientific article published in 2018

Climate change and physical disturbance manipulations result in distinct biological soil crust communities

scientific article

Common Ancestry and Novel Genetic Traits of Francisella novicida-Like Isolates from North America and Australia as Revealed by Comparative Genomic Analyses

scientific article published on June 10, 2011

Common bacterial responses in six ecosystems exposed to 10 years of elevated atmospheric carbon dioxide

scientific article

Comparative analyses of a putative Francisella conjugative element

scientific article published on 17 March 2014

Comparative diversity and composition of cyanobacteria in three predominant soil crusts of the Colorado Plateau

scientific article

Comparison of soil bacterial communities in rhizospheres of three plant species and the interspaces in an arid grassland

scientific article

Complete genome sequence of Atopobium parvulum type strain (IPP 1246)

scientific article

Complete genome sequence of Cryptobacterium curtum type strain (12-3)

scientific article

Complete genome sequence of Pirellula staleyi type strain (ATCC 27377)

scientific article

Complete genome sequence of Saccharomonospora viridis type strain (P101).

scientific article

Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1)

scientific article

Complete genome sequence of Thermobispora bispora type strain (R51).

scientific article

Composition of bacillus species in aerosols from 11 U.S. cities

scientific article

Correction for Challacombe et al., Whole-Genome Relationships among Francisella Bacteria of Diverse Origins Define New Species and Provide Specific Regions for Detection

scientific article

DNA sequence conservation between the Bacillus anthracis pXO2 plasmid and genomic sequence from closely related bacteria

scientific article

Detection of diverse new Francisella-like bacteria in environmental samples

scientific article

Diazotrophic community structure and function in two successional stages of biological soil crusts from the Colorado Plateau and Chihuahuan Desert

scientific article

Dryland biological soil crust cyanobacteria show unexpected decreases in abundance under long-term elevated CO2.

scientific article

Dryland soil microbial communities display spatial biogeographic patterns associated with soil depth and soil parent material

scientific article

Elevated atmospheric CO2 stimulates soil fungal diversity through increased fine root production in a semiarid shrubland ecosystem

scientific article

Empirical and theoretical bacterial diversity in four Arizona soils

scientific article

Environmental survey for four pathogenic bacteria and closely related species using phylogenetic and functional genes

scientific article published on May 2006

Erratum to: Complete genome sequence of Atopobium parvulum type strain (IPP 1246).

scientific article published on 15 June 2010

Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377)

scientific article

Fluorescent heteroduplex assay for monitoring Bacillus anthracis and close relatives in environmental samples

scientific article

Forest floor community metatranscriptomes identify fungal and bacterial responses to N deposition in two maple forests

scientific article published on 23 April 2015

Fungal identification using a Bayesian classifier and the Warcup training set of internal transcribed spacer sequences

scientific article published on 9 November 2015

Genetic diversity within the genus Francisella as revealed by comparative analyses of the genomes of two North American isolates from environmental sources

scientific article published on August 24, 2012

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

scientific article

High bacterial diversity of biological soil crusts in water tracks over permafrost in the high arctic polar desert

scientific article

Influence of plant polymers on the distribution and cultivation of bacteria in the phylum Acidobacteria

scientific article

Mobile genetic elements in the bacterial phylum Acidobacteria

scientific article published on July 1, 2012

Nitrogen fertilization has a stronger effect on soil nitrogen-fixing bacterial communities than elevated atmospheric CO2.

scientific article

Plant and microbial biomarkers suggest mechanisms of soil organic carbon accumulation in a Mojave Desert ecosystem under elevated CO2

article

Polysaccharide Degradation Capability of Actinomycetales Soil Isolates from a Semiarid Grassland of the Colorado Plateau

scientific article

Response and resilience of soil biocrust bacterial communities to chronic physical disturbance in arid shrublands

scientific article published on 24 November 2011

Response of biological soil crust diazotrophs to season, altered summer precipitation, and year-round increased temperature in an arid grassland of the colorado plateau, USA.

scientific article

Ribosomal Database Project: data and tools for high throughput rRNA analysis

scientific article

Ribosomal RNA gene detection and targeted culture of novel nitrogen-responsive fungal taxa from temperate pine forest soil

scientific article published on 12 September 2016

Shared features of cryptic plasmids from environmental and pathogenic Francisella species

scientific article published on 24 August 2017

Soil bacterial and fungal community responses to nitrogen addition across soil depth and microhabitat in an arid shrubland

scientific article

Soil microbial responses to nitrogen addition in arid ecosystems

scientific article

Statistical analysis of microarray data: a Bayesian approach

scientific article published on October 1, 2003

Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study

scientific article published on 10 February 2012

Three distinct clades of cultured heterocystous cyanobacteria constitute the dominant N2-fixing members of biological soil crusts of the Colorado Plateau, USA.

scientific article published in April 2007

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

scientific article

Virulence signatures: microarray-based approaches to discovery and analysis

scientific article published in November 2004

Whole-Genome Relationships among Francisella Bacteria of Diverse Origins Define New Species and Provide Specific Regions for Detection

scientific article