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List of works by Takuro Nunoura

A New Fractionation and Recovery Method of Viral Genomes Based on Nucleic Acid Composition and Structure Using Tandem Column Chromatography.

scientific article published on 23 May 2015

A long-term cultivation of an anaerobic methane-oxidizing microbial community from deep-sea methane-seep sediment using a continuous-flow bioreactor

scientific article

A new member of the family Totiviridae associated with arboreal ants (Camponotus nipponicus).

scientific article

A new polycipivirus identified in Colobopsis shohki

scientific article published on 21 December 2019

A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile.

scientific article

Asgard archaea illuminate the origin of eukaryotic cellular complexity.

scientific article published on 11 January 2017

Author Correction: Roadmap for naming uncultivated Archaea and Bacteria

scientific article published on 12 November 2020

Biochemical and genetic characterization of β-1,3 glucanase from a deep subseafloor Laceyella putida

scientific article published on 21 September 2015

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin

scientific article (publication date: 21 February 2006)

Bottleneck Size-Dependent Changes in the Genetic Diversity and Specific Growth Rate of a Rotavirus A Strain

scientific article published on 04 March 2020

Cell proliferation at 122 degrees C and isotopically heavy CH4 production by a hyperthermophilic methanogen under high-pressure cultivation

scientific article

Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at the Kuroshima Knoll, southern Ryukyu Arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes

scientific article

Comparative Analysis of Microbial Communities in Iron-Dominated Flocculent Mats in Deep-Sea Hydrothermal Environments

scientific article published on 15 July 2016

Comparison of microbial communities associated with phase-separation-induced hydrothermal fluids at the Yonaguni Knoll IV hydrothermal field, the Southern Okinawa Trough

scientific article published on 09 January 2009

Complete Genome Sequence of a Novel RNA Virus Identified from a Deep-Sea Animal, Osedax japonicus

article

Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan

scientific article

Cytochrome aa3 in facultatively aerobic and hyperthermophilic archaeon Pyrobaculum oguniense.

scientific article published in August 2005

Deep-sea vent phage DNA polymerase specifically initiates DNA synthesis in the absence of primers.

scientific article published on 6 March 2017

Desulfothermus okinawensis sp. nov., a thermophilic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field

scientific article

Development of 16S rRNA gene-targeted primers for detection of archaeal anaerobic methanotrophs (ANMEs).

scientific article published on 9 May 2009

Distribution of eukaryotic serine racemases in the bacterial domain and characterization of a representative protein in Roseobacter litoralis Och 149.

scientific article

Distribution, phylogenetic diversity and physiological characteristics of epsilon-Proteobacteria in a deep-sea hydrothermal field

scientific article published in October 2005

Disturbance of deep-sea environments induced by the M9.0 Tohoku Earthquake ⬇️

scientific article published on February 16, 2012

Diverse DNA modification in marine prokaryotic and viral communities

scientific article published on 01 February 2022

Domain-level identification and quantification of relative prokaryotic cell abundance in microbial communities by Micro-FTIR spectroscopy.

scientific article published on 25 August 2011

Draft Genome Sequence of Mariprofundus micogutta Strain ET2.

scientific article published on 17 May 2018

Drivers of Bacterial α- and β-Diversity Patterns and Functioning in Subsurface Hadal Sediments

scientific article published on 14 November 2019

Enantioselective Utilization of D-Amino Acids by Deep-Sea Microorganisms

scientific article published on 19 April 2016

Endemicity of the cosmopolitan mesophilic chemolithoautotroph Sulfurimonas at deep-sea hydrothermal vents

scientific article

Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria

scientific article

Exilispira thermophila gen. nov., sp. nov., an anaerobic, thermophilic spirochaete isolated from a deep-sea hydrothermal vent chimney.

scientific article

FLDS: A Comprehensive dsRNA Sequencing Method for Intracellular RNA Virus Surveillance.

scientific article

Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments

scientific article published in December 2005

Genome sequence of a novel deep-sea vent epsilonproteobacterial phage provides new insight into the co-evolution of Epsilonproteobacteria and their phages.

scientific article published on 20 March 2013

Genome-enabled metabolic reconstruction of dominant chemosynthetic colonizers in deep-sea massive sulfide deposits.

scientific article published on 10 January 2018

Genomic characterization of a temperate phage of the psychrotolerant deep-sea bacterium Aurantimonas sp.

scientific article published on 30 October 2014

Genomics insights into ecotype formation of ammonia-oxidizing archaea in the deep ocean

scientific article published on 31 January 2019

Hadal biosphere: insight into the microbial ecosystem in the deepest ocean on Earth

scientific article

Hadal water biogeochemistry over the Izu–Ogasawara Trench observed with a full-depth CTD-CMS

scientific article published in 2018

Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt

scientific article

Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f

scientific article published on 12 March 2020

Host-symbiont relationships in hydrothermal vent gastropods of the genus Alviniconcha from the Southwest Pacific

scientific article published on February 2006

Hydrogen and carbon isotope fractionation factors of aerobic methane oxidation in deep-sea water

scientific article published in 2021

Hydrogenivirga okinawensis sp. nov., a thermophilic sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough.

scientific article

Identification and genomic analysis of temperate Pseudomonas bacteriophage PstS-1 from the Japan trench at a depth of 7000 m.

scientific article published on 27 May 2015

In situ experimental evidences for responses of abyssal benthic biota to shifts in phytodetritus compositions linked to global climate change

scientific article published in 2021

Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group.

scientific article

Isolation and phylogenetic diversity of members of previously uncultivated epsilon-Proteobacteria in deep-sea hydrothermal fields

scientific article published in January 2003

Kosmotoga arenicorallina sp. nov. a thermophilic and obligately anaerobic heterotroph isolated from a shallow hydrothermal system occurring within a coral reef, southern part of the Yaeyama Archipelago, Japan, reclassification of [...]

scientific article

Lebetimonas natsushimae sp. nov., a novel strictly anaerobic, moderately thermophilic chemoautotroph isolated from a deep-sea hydrothermal vent polychaete nest in the Mid-Okinawa Trough.

scientific article published on 4 July 2017

Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation.

scientific article

Marinitoga okinawensis sp. nov., a novel thermophilic and anaerobic heterotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough

scientific article

Mariprofundus micogutta sp. nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a description of Mariprofundales ord. nov. and Zetaproteobacteria classis n

scientific article published on 20 October 2016

Metagenomic Analysis of Viral Communities in (Hado)Pelagic Sediments ⬇️

scientific article published on February 27, 2013

Metagenomic insights into zooplankton-associated bacterial communities

scientific article

Methylomarinovum caldicuralii gen. nov., sp. nov., a moderately thermophilic methanotroph isolated from a shallow submarine hydrothermal system, and proposal of the family Methylothermaceae fam. nov.

scientific article

Methylomarinum vadi gen. nov., sp. nov., a methanotroph isolated from two distinct marine environments.

scientific article

Microbial Diversity in Sediments from the Bottom of the Challenger Deep, the Mariana Trench.

scientific article

Microbial community and geochemical analyses of trans-trench sediments for understanding the roles of hadal environments

scientific article published on 11 December 2019

Microbial community in a sediment-hosted CO2 lake of the southern Okinawa Trough hydrothermal system

scientific article published on 07 September 2006

Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria

scientific article published on 07 January 2020

Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics- and methane-rich sediments off Shimokita Peninsula.

scientific article published on 27 March 2008

Physiological and genomic features of a novel sulfur-oxidizing gammaproteobacterium belonging to a previously uncultivated symbiotic lineage isolated from a hydrothermal vent

scientific article

Quantification of mcrA by fluorescent PCR in methanogenic and methanotrophic microbial communities.

scientific article

Quantification of mcrA by quantitative fluorescent PCR in sediments from methane seep of the Nankai Trough.

scientific article published on July 2006

Quantitative Viral Community DNA Analysis Reveals the Dominance of Single-Stranded DNA Viruses in Offshore Upper Bathyal Sediment from Tohoku, Japan.

scientific article published on 6 February 2018

Roadmap for naming uncultivated Archaea and Bacteria

scientific article published on 08 June 2020

Spatial distribution of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems

scientific article published on April 2004

Spatial distribution of viruses associated with planktonic and attached microbial communities in hydrothermal environments.

scientific article

Subseafloor Microbial Communities in Methane Hydrate-Bearing Sediment at Two Distinct Locations (ODP Leg204) in the Cascadia Margin ⬇️

scientific article published on January 1, 2008

Sulfurivirga caldicuralii gen. nov., sp. nov., a novel microaerobic, thermophilic, thiosulfate-oxidizing chemolithoautotroph, isolated from a shallow marine hydrothermal system occurring in a coral reef, Japan.

scientific article

Thermaerobacter nagasakiensis sp. nov., a novel aerobic and extremely thermophilic marine bacterium.

scientific article

Thermosulfidibacter takaii gen. nov., sp. nov., a thermophilic, hydrogen-oxidizing, sulfur-reducing chemolithoautotroph isolated from a deep-sea hydrothermal field in the Southern Okinawa Trough.

scientific article

Thermotomaculum hydrothermale gen. nov., sp. nov., a novel heterotrophic thermophile within the phylum Acidobacteria from a deep-sea hydrothermal vent chimney in the Southern Okinawa Trough.

scientific article

Three families of Asgard archaeal viruses identified in metagenome-assembled genomes

scientific article published in 2022

Unveiling the RNA virosphere associated with marine microorganisms

scientific article published on 06 September 2018

Variability in microbial community and venting chemistry in a sediment-hosted backarc hydrothermal system: Impacts of subseafloor phase-separation

scientific article published on 01 September 2005

Variability in the microbial communities and hydrothermal fluid chemistry at the newly discovered Mariner hydrothermal field, southern Lau Basin

scholarly article

Variability of subseafloor viral abundance at the geographically and geologically distinct continental margins

scientific article published on 23 December 2013

Variance and potential niche separation of microbial communities in subseafloor sediments off Shimokita Peninsula, Japan.

scientific article published on 21 October 2015

Viral Communities in the Global Deep Ocean Conveyor Belt Assessed by Targeted Viromics

scientific article published on 21 August 2019

Viral Infections Boost Prokaryotic Biomass Production and Organic C Cycling in Hadal Trench Sediments

scientific article published on 23 August 2019

Virus-mediated archaeal hecatomb in the deep seafloor

scientific article

[Archaea plays important roles in global material circulation]

scientific article published on 01 February 2009

d-Lactate electrochemical biosensor prepared by immobilization of thermostable dye-linked d-lactate dehydrogenase from Candidatus Caldiarchaeum subterraneum.

scientific article published on 21 April 2018

dsRNA-seq Reveals Novel RNA Virus and Virus-Like Putative Complete Genome Sequences from Hymeniacidon sp. Sponge

scientific article published on 01 January 2020

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