List of works - Hiromi Yoshida

A Low Pathogenic H5N2 Influenza Virus Isolated in Taiwan Acquired High Pathogenicity by Consecutive Passages in Chickens ⬇️

scientific article published on February 3, 2011

Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides

scientific article

Catalytic reaction mechanism of Pseudomonas stutzeri L-rhamnose isomerase deduced from X-ray structures

scientific article

Characterization of avian influenza viruses isolated from domestic ducks in Vietnam in 2009 and 2010 ⬇️

scientific article published on November 9, 2011

Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages

scientific article

Crystal structure of Aspergillus niger isopullulanase, a member of glycoside hydrolase family 49

scientific article

Crystal structure of a Xenopus laevis skin proto-type galectin, close to but distinct from galectin-1

scientific article

Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp

scientific article published on 01 May 2021

Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose

scientific article

Crystal structures of rare disaccharides, α-D-glucopyranosyl β-D-psicofuranoside, and α-D-galactopyranosyl β-D-psicofuranoside

scientific article published on 09 April 2011

Crystallization and preliminary X-ray diffraction studies of L-rhamnose isomerase from Pseudomonas stutzeri

scientific article

Designer fungus FAD glucose dehydrogenase capable of direct electron transfer

scientific article published on 26 July 2018

Development of vaccine strains of H5 and H7 influenza viruses

scientific article published on 01 January 2008

Elucidation of the role of Ser329 and the C-terminal region in the catalytic activity of Pseudomonas stutzeri L-rhamnose isomerase

scientific article

Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway

scientific article

Evaluation of the reverse transcription loop-mediated isothermal amplification (RT-LAMP) as a screening method for the detection of influenza viruses in the fecal materials of water birds

scientific article published on 28 January 2011

Functional and structural bases of a cysteine-less mutant as a long-lasting substitute for galectin-1

scientific article

Inducer exclusion in Escherichia coli by non-PTS substrates: the role of the PEP to pyruvate ratio in determining the phosphorylation state of enzyme IIAGlc

scientific article published on 01 November 1998

Monooxygenation by a thermophilic cytochrome P450 via direct electron donation from NADH.

scientific article published on 28 February 2011

Overexpression, purification, crystallization and preliminary X-ray crystal analysis of Bacillus pallidusD-arabinose isomerase

scientific article published on 30 September 2008

Purification, crystallization and preliminary X-ray analysis of an HA17-HA70 (HA2-HA3) complex from Clostridium botulinum type C progenitor toxin

scientific article published on 24 December 2013

Purification, crystallization and preliminary X-ray diffraction studies of D-tagatose 3-epimerase from Pseudomonas cichorii.

scientific article published on 27 January 2007

Role of the Tyr270 residue in 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase from Mesorhizobium loti

scientific article

Structural analysis of fungus-derived FAD glucose dehydrogenase

scientific article

Structural and biochemical characterization of the Clostridium perfringens autolysin catalytic domain.

scientific article published on 7 December 2016

Structural basis for cyclodextrin recognition by Thermoactinomyces vulgaris cyclo/maltodextrin-binding protein

scientific article

Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft.

scientific article published on 27 March 2006

Structure of a putative molybdenum-cofactor biosynthesis protein C (MoaC) from Sulfolobus tokodaii (ST0472)

scientific article

Structure ofl-rhamnose isomerase in complex withl-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site

scientific article

Structures of an isopenicillin N converting Ntn-hydrolase reveal different catalytic roles for the active site residues of precursor and mature enzyme

scientific article

The first crystal structure of manganese superoxide dismutase from the genus Staphylococcus.

scientific article published on 26 February 2018

The structures of L-rhamnose isomerase from Pseudomonas stutzeri in complexes with L-rhamnose and D-allose provide insights into broad substrate specificity.

scientific article

Three-dimensional structures of enzymes useful for beta-lactam antibiotic production.

scientific article published in August 2004

X-ray Structures of Human Galectin-9 C-terminal Domain in Complexes with a Biantennary Oligosaccharide and Sialyllactose ⬇️

scientific article published on September 22, 2010

X-ray structure of Arthrobacter globiformis M30 ketose 3-epimerase for the production of D-allulose from D-fructose

scientific article published on 21 September 2018

X-ray structure of Clostridium perfringens sortase B cysteine transpeptidase

scientific article published on 26 September 2017

X-ray structure of a novel L-ribose isomerase acting on a non-natural sugar L-ribose as its ideal substrate

scientific article

X-ray structure of a novel endolysin encoded by episomal phage phiSM101 of Clostridium perfringens.

scientific article published on 5 March 2014

X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains

scientific article

X-ray structure of a protease-resistant mutant form of human galectin-9 having two carbohydrate recognition domains with a metal-binding site

scientific article

X-ray structure of the direct electron transfer-type FAD glucose dehydrogenase catalytic subunit complexed with a hitchhiker protein

scientific article published on 28 August 2019

X-ray structures of Bacillus pallidus d-arabinose isomerase and its complex with l-fucitol

scientific article

X-ray structures of fructosyl peptide oxidases revealing residues responsible for gating oxygen access in the oxidative half reaction

scientific article

X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates.

scientific article

List of works by Hiromi Yoshida

A Low Pathogenic H5N2 Influenza Virus Isolated in Taiwan Acquired High Pathogenicity by Consecutive Passages in Chickens ⬇️

Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides

Catalytic reaction mechanism of Pseudomonas stutzeri L-rhamnose isomerase deduced from X-ray structures

Characterization of avian influenza viruses isolated from domestic ducks in Vietnam in 2009 and 2010 ⬇️

Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages

Crystal structure of Aspergillus niger isopullulanase, a member of glycoside hydrolase family 49

Crystal structure of a Xenopus laevis skin proto-type galectin, close to but distinct from galectin-1

Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp

Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose

Crystal structures of rare disaccharides, α-D-glucopyranosyl β-D-psicofuranoside, and α-D-galactopyranosyl β-D-psicofuranoside

Crystallization and preliminary X-ray diffraction studies of L-rhamnose isomerase from Pseudomonas stutzeri

Designer fungus FAD glucose dehydrogenase capable of direct electron transfer

Development of vaccine strains of H5 and H7 influenza viruses

Elucidation of the role of Ser329 and the C-terminal region in the catalytic activity of Pseudomonas stutzeri L-rhamnose isomerase

Essentiality of tetramer formation of Cellulomonas parahominis L-ribose isomerase involved in novel L-ribose metabolic pathway

Evaluation of the reverse transcription loop-mediated isothermal amplification (RT-LAMP) as a screening method for the detection of influenza viruses in the fecal materials of water birds

Functional and structural bases of a cysteine-less mutant as a long-lasting substitute for galectin-1

Inducer exclusion in Escherichia coli by non-PTS substrates: the role of the PEP to pyruvate ratio in determining the phosphorylation state of enzyme IIAGlc

Monooxygenation by a thermophilic cytochrome P450 via direct electron donation from NADH.

Overexpression, purification, crystallization and preliminary X-ray crystal analysis of Bacillus pallidusD-arabinose isomerase

Purification, crystallization and preliminary X-ray analysis of an HA17-HA70 (HA2-HA3) complex from Clostridium botulinum type C progenitor toxin

Purification, crystallization and preliminary X-ray diffraction studies of D-tagatose 3-epimerase from Pseudomonas cichorii.

Role of the Tyr270 residue in 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase from Mesorhizobium loti

Structural analysis of fungus-derived FAD glucose dehydrogenase

Structural and biochemical characterization of the Clostridium perfringens autolysin catalytic domain.

Structural basis for cyclodextrin recognition by Thermoactinomyces vulgaris cyclo/maltodextrin-binding protein

Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft.

Structure of a putative molybdenum-cofactor biosynthesis protein C (MoaC) from Sulfolobus tokodaii (ST0472)

Structure ofl-rhamnose isomerase in complex withl-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site

Structures of an isopenicillin N converting Ntn-hydrolase reveal different catalytic roles for the active site residues of precursor and mature enzyme

The first crystal structure of manganese superoxide dismutase from the genus Staphylococcus.

The structures of L-rhamnose isomerase from Pseudomonas stutzeri in complexes with L-rhamnose and D-allose provide insights into broad substrate specificity.

Three-dimensional structures of enzymes useful for beta-lactam antibiotic production.

X-ray Structures of Human Galectin-9 C-terminal Domain in Complexes with a Biantennary Oligosaccharide and Sialyllactose ⬇️

X-ray structure of Arthrobacter globiformis M30 ketose 3-epimerase for the production of D-allulose from D-fructose

X-ray structure of Clostridium perfringens sortase B cysteine transpeptidase

X-ray structure of a novel L-ribose isomerase acting on a non-natural sugar L-ribose as its ideal substrate

X-ray structure of a novel endolysin encoded by episomal phage phiSM101 of Clostridium perfringens.

X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains

X-ray structure of a protease-resistant mutant form of human galectin-9 having two carbohydrate recognition domains with a metal-binding site

X-ray structure of the direct electron transfer-type FAD glucose dehydrogenase catalytic subunit complexed with a hitchhiker protein

X-ray structures of Bacillus pallidus d-arabinose isomerase and its complex with l-fucitol

X-ray structures of fructosyl peptide oxidases revealing residues responsible for gating oxygen access in the oxidative half reaction

X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates.