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List of works by John Anthony Capra

Accounting for diverse evolutionary forces reveals mosaic patterns of selection on human preterm birth loci

scientific article published on 24 July 2020

Examination of Signatures of Recent Positive Selection on Genes Involved in Human Sialic Acid Biology.

scientific article published on 28 March 2018

Functional annotation of rare structural variation in the human brain

scientific article published on 12 June 2020

GSEL: a fast, flexible python package for detecting signatures of diverse evolutionary forces on genomic regions

scientific article published in 2023

Genome wide association analysis identifies genetic variants associated with reproductive variation across domestic dog breeds and uncovers links to domestication

Genome-wide maps of distal gene regulatory enhancers active in the human placenta

scientific article published in PLoS ONE

How old is my gene? ⬇️

scientific article (publication date: November 2013)

Identifying digenic disease genes via machine learning in the Undiagnosed Diseases Network

scientific article published on 15 September 2021

Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates

scientific article published in 2024

Inferred divergent gene regulation in archaic hominins reveals potential phenotypic differences

scientific article published on 07 October 2019

Joint mouse-human phenome-wide association to test gene function and disease risk

scientific article

Learning and interpreting the gene regulatory grammar in a deep learning framework

scientific article published on 02 November 2020

Linking rare and common disease vocabularies by mapping between the human phenotype ontology and phecodes

scientific article published in 2023

Modeling the Evolutionary Architectures of Transcribed Human Enhancer Sequences Reveals Distinct Origins, Functions, and Associations with Human Trait Variation

scientific article published in 2021

Neanderthal introgression reintroduced functional ancestral alleles lost in Eurasian populations

scientific article published on 27 July 2020

Phenotypic Profiling in Subjects Heterozygous for 1 of 2 Rare Variants in the Hypophosphatasia Gene (ALPL)

scientific article published on 28 June 2020

Predicting changes in protein thermodynamic stability upon point mutation with deep 3D convolutional neural networks

scientific article published on 30 November 2020

Prediction of gene regulatory enhancers across species reveals evolutionarily conserved sequence properties

article

Sequence Characteristics Distinguish Transcribed Enhancers from Promoters and Predict Their Breadth of Activity

scientific article published on 29 January 2019

The evolution of the human genome

scientific article published on 03 September 2015

The impact of natural selection on the evolution and function of placentally expressed galectins: Supplementary Tables, Figures and Files

scholarly article published 23 December 2018

The phenotypic legacy of admixture between modern humans and Neandertals

scientific article

The transformative potential of an integrative approach to pregnancy

scientific article published on 15 July 2017

What is a placental mammal anyway?

scientific article published on 12 September 2017

Which animals are at risk? Predicting species susceptibility to Covid-19

scientific article published on 10 July 2020

integRATE: a desirability-based data integration framework for the prioritization of candidate genes across heterogeneous omics and its application to preterm birth

integRATE: a desirability-based data integration framework for the prioritization of candidate genes across heterogeneous omics and its application to preterm birth

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