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List of works by Pau Bernadó

A General Strategy to Access Structural Information at Atomic Resolution in Polyglutamine Homorepeats.

scientific article published on 23 January 2018

A Three-protein Charge Zipper Stabilizes a Complex Modulating Bacterial Gene Silencing.

scientific article

A self-consistent description of the conformational behavior of chemically denatured proteins from NMR and small angle scattering.

scientific article

A structural model for unfolded proteins from residual dipolar couplings and small-angle x-ray scattering.

scientific article

Active-Site-Directed Inhibitors of Prolyl Oligopeptidase Abolish Its Conformational Dynamics.

scientific article

Amino acid bulkiness defines the local conformations and dynamics of natively unfolded alpha-synuclein and tau

scientific article published on 23 February 2007

Analysis of intrinsically disordered proteins by small-angle X-ray scattering.

scientific article published in January 2012

Comment on the Optimal Parameters to Derive Intrinsically Disordered Protein Conformational Ensembles from Small-Angle X-ray Scattering Data Using the Ensemble Optimization Method

scientific article published on 17 March 2021

Conformational transitions in human translin enable nucleic acid binding.

scientific article published on 26 August 2013

Defining Long-Range Order and Local Disorder in Native α-Synuclein Using Residual Dipolar Couplings

scientific article published on 01 December 2005

Defining the nature of thermal intermediate in 3 state folding proteins: apoflavodoxin, a study case.

scientific article

Design and structure of an equilibrium protein folding intermediate: a hint into dynamical regions of proteins

scientific article

Disentangling polydispersity in the PCNA-p15PAF complex, a disordered, transient and multivalent macromolecular assembly.

scientific article

Disentangling the complexity of low complexity proteins

scientific article published on 30 January 2019

Disulfide driven folding for a conditionally disordered protein.

scientific article

Double Monoubiquitination Modifies the Molecular Recognition Properties of p15PAF Promoting Binding to the Reader Module of Dnmt1

scientific article published on 18 September 2019

Dynamic interactions of proteins in complex networks: a more structured view.

scientific article published on 27 August 2009

Dynamic interplay between catalytic and lectin domains of GalNAc-transferases modulates protein O-glycosylation.

scientific article published on 5 May 2015

Effect of interdomain dynamics on the structure determination of modular proteins by small-angle scattering

scientific article published on 21 October 2009

Ensemble Structure of the Highly Flexible Complex Formed between Vesicular Stomatitis Virus Unassembled Nucleoprotein and its Phosphoprotein Chaperone.

scientific article

Evidence of the Reduced Abundance of Proline cis Conformation in Protein Poly Proline Tracts

scientific article published on 08 April 2020

Flexible-meccano: a tool for the generation of explicit ensemble descriptions of intrinsically disordered proteins and their associated experimental observables.

scientific article published in June 2012

Human mitochondrial mTERF wraps around DNA through a left-handed superhelical tandem repeat

scientific article

Human mitochondrial transcription factor A induces a U-turn structure in the light strand promoter

scientific article

Hydrodynamic Models and Computational Methods for NMR Relaxation

scientific article published on 01 January 2005

Identification of slow correlated motions in proteins using residual dipolar and hydrogen-bond scalar couplings.

scientific article

Indirect DNA Readout by an H-NS Related Protein: Structure of the DNA Complex of the C-Terminal Domain of Ler

scientific article

Interaction of human complement with Sbi, a staphylococcal immunoglobulin-binding protein: indications of a novel mechanism of complement evasion by Staphylococcus aureus

scientific article

Interplay of Protein Disorder in Retinoic Acid Receptor Heterodimer and Its Corepressor Regulates Gene Expression

scientific article published on 06 June 2019

Interpretation of NMR relaxation properties of Pin1, a two-domain protein, based on Brownian dynamic simulations.

scientific article published in May 2004

Investigating the Formation of Structural Elements in Proteins Using Local Sequence-Dependent Information and a Heuristic Search Algorithm

scientific article published on 22 March 2019

Lanthanide Modulation of the Orientation of Macromolecules Induced by Purple Membrane

scientific article published on 01 January 2002

Local dynamic amplitudes on the protein backbone from dipolar couplings: toward the elucidation of slower motions in biomolecules.

scientific article published in June 2004

Low-resolution structures of transient protein-protein complexes using small-angle X-ray scattering.

scientific article published in April 2009

Macromolecular crowding in biological systems: hydrodynamics and NMR methods.

scientific article published in September 2004

Multiple stable conformations account for reversible concentration-dependent oligomerization and autoinhibition of a metamorphic metallopeptidase

scientific article

NMR measurement of the off rate from the first calcium-binding site of the synaptotagmin I C2A domain

scientific article published on 01 April 2002

Noninvasive Structural Analysis of Intermediate Species During Fibrillation: An Application of Small-Angle X-Ray Scattering

scientific article published on 01 January 2018

On the Use of low-resolution Data to Improve Structure Prediction of Proteins and Protein Complexes

scientific article published in November 2009

Oncogenic mutations at the EGFR ectodomain structurally converge to remove a steric hindrance on a kinase-coupled cryptic epitope

scientific article published on 26 April 2019

ProtSA: a web application for calculating sequence specific protein solvent accessibilities in the unfolded ensemble.

scientific article

Protein Flexibility and Synergy of HMG Domains Underlie U-Turn Bending of DNA by TFAM in Solution.

scientific article published on 13 December 2017

Protein loop compaction and the origin of the effect of arginine and glutamic acid mixtures on solubility, stability and transient oligomerization of proteins

scientific article published on 09 March 2011

Protein tyrosine phosphatase oligomerization studied by a combination of 15N NMR relaxation and 129Xe NMR. Effect of buffer containing arginine and glutamic acid.

scientific article published on 17 April 2007

Realistic Ensemble Models of Intrinsically Disordered Proteins Using a Structure-Encoding Coil Database

scientific article published on 13 December 2018

Residual Dipolar Couplings in Short Peptides Reveal Systematic Conformational Preferences of Individual Amino Acids

scientific article published on 01 October 2006

Sequence-specific solvent accessibilities of protein residues in unfolded protein ensembles.

scientific article published on 29 September 2006

Site-Specific Isotopic Labeling (SSIL): Access to High-Resolution Structural and Dynamic Information in Low-Complexity Proteins

scientific article published on 10 December 2019

Small-angle scattering studies of intrinsically disordered proteins and their complexes.

scientific article published on 26 October 2016

Solution scattering approaches to dynamical ordering in biomolecular systems.

scientific article

Structural Analysis of Multi-component Amyloid Systems by Chemometric SAXS Data Decomposition.

scientific article

Structural Analysis of an Equilibrium Folding Intermediate in the Apoflavodoxin Native Ensemble by Small-Angle X-ray Scattering ⬇️

scientific article published on January 7, 2011

Structural Characterization of Highly Flexible Proteins by Small-Angle Scattering

scientific article published in January 2017

Structural Characterization of the Ribosomal P1A−P2B Protein Dimer by Small-Angle X-ray Scattering and NMR Spectroscopy†

scientific article published on 30 January 2007

Structural Relationships Among the Ribosomal Stalk Proteins from the Three Domains of Life

scientific article published on 09 July 2008

Structural biology: Proteins in dynamic equilibrium.

scientific article

Structural characterization of alpha-synuclein in an aggregation prone state.

scientific article published on September 2009

Structural characterization of intrinsically disordered proteins by the combined use of NMR and SAXS.

scientific article published on October 2012

Structural characterization of the active and inactive states of Src kinase in solution by small-angle X-ray scattering.

scientific article published on 28 November 2007

Structural characterization of unphosphorylated STAT5a oligomerization equilibrium in solution by small-angle X-ray scattering.

scientific article published on April 2009

Structural disorder within sendai virus nucleoprotein and phosphoprotein: insight into the structural basis of molecular recognition.

scientific article published on August 2010

Structure of p15(PAF)-PCNA complex and implications for clamp sliding during DNA replication and repair

scientific article

The Unique Domain Forms a Fuzzy Intramolecular Complex in Src Family Kinases

scientific article published on 16 March 2017

The dimeric structure and the bivalent recognition of H3K4me3 by the tumor suppressor ING4 suggests a mechanism for enhanced targeting of the HBO1 complex to chromatin.

scientific article

The hexameric structure of the human mitochondrial replicative helicase Twinkle.

scientific article published on 30 March 2015

Weak oligomerization of low-molecular-weight protein tyrosine phosphatase is conserved from mammals to bacteria.

scientific article published in August 2009

p15PAF is an intrinsically disordered protein with nonrandom structural preferences at sites of interaction with other proteins.

scientific article

pyDockSAXS: protein-protein complex structure by SAXS and computational docking

scientific article published on 20 April 2015

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