List of works by Terry Speed

A Bayesian analysis for mapping from radiation hybrid data

scientific article published on January 1, 1992

A DNA resequencing array for genes involved in Parkinson's disease.

scientific article

A Tetrahymena Piwi bound to mature tRNA 3' fragments activates the exonuclease Xrn2 for RNA processing in the nucleus

scientific article published on 18 October 2012

A benchmark for Affymetrix GeneChip expression measures

scientific article published in February 2004

A bioinformatic strategy for the detection, classification and analysis of bacterial autotransporters

scientific article

A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes

scientific article

A comparison of Affymetrix gene expression arrays

scientific article published on 15 November 2007

A comparison of match-only algorithms for the analysis of Plasmodium falciparum oligonucleotide arrays.

scientific article published in April 2005

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

scientific article (publication date: 22 January 2003)

A component of the mir-17-92 polycistronic oncomir promotes oncogene-dependent apoptosis.

scientific article published on 15 October 2013

A dynamic programming approach for the alignment of signal peaks in multiple gas chromatography-mass spectrometry experiments

scientific article

A genetic screen for behavioral mutations that perturb dopaminergic homeostasis in mice

scientific article published in February 2006

A genotype calling algorithm for affymetrix SNP arrays.

scientific article published on 2 November 2005

A hierarchical approach to removal of unwanted variation for large-scale metabolomics data

scientific article published on 17 August 2021

A high force of plasmodium vivax blood-stage infection drives the rapid acquisition of immunity in papua new guinean children

scientific article published on 5 September 2013

A molecular threshold for effector CD8(+) T cell differentiation controlled by transcription factors Blimp-1 and T-bet.

scientific article published on 7 March 2016

A new normalization for Nanostring nCounter gene expression data

scientific article published on 01 July 2019

A new rodent model to assess blood stage immunity to the Plasmodium falciparum antigen merozoite surface protein 119 reveals a protective role for invasion inhibitory antibodies

scientific article

A note on the combination of estimates of a recombination fraction

scientific article published on 01 May 1996

A positive feedback between p53 and miR-34 miRNAs mediates tumor suppression.

scientific article published on 14 February 2014

A proteome strategy for fractionating proteins and peptides using continuous free-flow electrophoresis coupled off-line to reversed-phase high-performance liquid chromatography.

scientific article published in August 2004

A quartet of PIF bHLH factors provides a transcriptionally centered signaling hub that regulates seedling morphogenesis through differential expression-patterning of shared target genes in Arabidopsis.

scientific article

A recombination hotspot leads to sequence variability within a novel gene (AK005651) and contributes to type 1 diabetes susceptibility

scientific article published on 4 November 2010

A score test for the linkage analysis of qualitative and quantitative traits based on identity by descent data from sib-pairs

scientific article

A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6.

scientific article published on 17 June 2009

A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods

scientific article published on 04 February 2009

A statistical approach to the interpretation of molecular dynamics simulations of calmodulin equilibrium dynamics

scientific article published in December 2005

A statistical framework for analyzing deep mutational scanning data

scientific article published on 07 August 2017

A study of isolation procedures for multiple infections of Salmonella and Arizona in a wild marsupial, the quokka (Setonix brachyurus).

scientific article published in December 1982

A subset of Plasmodium falciparum SERA genes are expressed and appear to play an important role in the erythrocytic cycle

scientific article (publication date: 6 December 2002)

A systematic approach for comprehensive T-cell epitope discovery using peptide libraries

scientific article

A three-wavelength labeling approach for DNA sequencing using energy transfer primers and capillary electrophoresis

scientific article published in June 1998

Accurate RNA Sequencing From Formalin-Fixed Cancer Tissue To Represent High-Quality Transcriptome From Frozen Tissue

scientific article published on 26 January 2018

Alveolar lining layer is thin and continuous: low-temperature scanning electron microscopy of rat lung

scientific article

An HMM model for coiled-coil domains and a comparison with PSSM-based predictions.

scientific article published in April 2002

An algorithm for haplotype analysis.

scientific article published in January 1997

An integrated genetic and functional analysis of the role of type II transmembrane serine proteases (TMPRSSs) in hearing loss

scientific article

An integrative bioinformatic predictor of protein sub-cellular localisation in malaria

scientific article published on 21 November 2011

Analysis of extended HLA haplotypes in multiple sclerosis and narcolepsy families confirms a predisposing effect for the class I region in Tasmanian MS patients.

scientific article published on 26 January 2007

Analysis of gene expression during neurite outgrowth and regeneration

scientific article

Analysis of gene expression in the developing mouse retina

scholarly article

Analysis of the platypus genome suggests a transposon origin for mammalian imprinting

scientific article published on 02 January 2009

Argon laser photocoagulation-induced modification of gene expression in the retina.

scientific article

Assessing between-block heterogeneity within the post-strata of the 1990 Post-Enumeration Survey.

scientific article published in September 1993

Assessment of DNA methylation profiling and copy number variation as indications of clonal relationship in ipsilateral and contralateral breast cancers to distinguish recurrent breast cancer from a second primary tumour

scientific article published on 9 October 2015

Atypical regions in large genomic DNA sequences

scientific article published on July 1994

Background adjustment for DNA microarrays using a database of microarray experiments.

scientific article published on November 2009

Bayesian inference of signaling network topology in a cancer cell line

scientific article

Cell type- and estrogen receptor-subtype specific regulation of selective estrogen receptor modulator regulatory elements

scientific article

Characterization of the opossum immune genome provides insights into the evolution of the mammalian immune system

scientific article published on 10 May 2007

Chromosomes X, 9, and the H2 locus interact epistatically to control Leishmania major infection

scientific article published on 01 September 1999

Cisplatin-induced primordial follicle oocyte killing and loss of fertility are not prevented by imatinib

scientific article published on August 2012

Coevolution of the Relaxin‐Like Peptides and Their Receptors

scientific article

Coevolution of the relaxin-like peptides and their receptors

scientific article published on 01 May 2005

Colon cancer prognosis prediction by gene expression profiling

scientific article published on 01 September 2005

Colon tumour secretopeptidome: insights into endogenous proteolytic cleavage events in the colon tumour microenvironment

scientific article published on 15 May 2013

Combining calls from multiple somatic mutation-callers

scientific article

Comparing somatic mutation-callers: beyond Venn diagrams

scientific article

Conference Scene: Lessons learned from the 5th Statistical Analysis Workshop of the Pharmacogenetics Research Network

scientific article published on 01 March 2010

Conserved role of unc-79 in ethanol responses in lightweight mutant mice

scientific article (publication date: August 2010)

Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity

scientific article

Contextual fear conditioning induces differential alternative splicing

scientific article published on 19 July 2016

Controlling technical variation amongst 6693 patient microarrays of the randomized MINDACT trial

scientific article published on 27 July 2020

Copy number variation in patients with disorders of sex development due to 46,XY gonadal dysgenesis

scientific article

Copy-number-aware differential analysis of quantitative DNA sequencing data

scientific article

Correcting gene expression data when neither the unwanted variation nor the factor of interest are observed

scientific article

Correction to: A statistical framework for analyzing deep mutational scanning data

scientific article published on 7 February 2018

Correction: Identification of Candidate Growth Promoting Genes in Ovarian Cancer through Integrated Copy Number and Expression Analysis.

scientific article published on 19 July 2011

Correction: The Subclonal Architecture of Metastatic Breast Cancer: Results from a Prospective Community-Based Rapid Autopsy Program "CASCADE".

scientific article published on 21 April 2017

Correction: Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm

scientific article published on 29 July 2008

Corrigendum to 'MicroRNAs in CD4(+) T cell subsets are markers of disease risk and T cell dysfunction in individuals at risk for type 1 diabetes' [J. Autoimmun. 68C (2016) 52-61].

scientific article published on 25 April 2016

DECENT: differential expression with capture efficiency adjustmeNT for single-cell RNA-seq data

scientific article published on 01 December 2019

DNA sequencing with transposons

scientific article published in January 2000

Dating rare mutations from small samples with dense marker data

scientific article

Deciphering clonality in aneuploid breast tumors using SNP array and sequencing data

scientific article

Decomposable graphs and hypergraphs

Deficiency of microRNA miR-34a expands cell fate potential in pluripotent stem cells

scientific article published on 12 January 2017

Deriving statistical models for predicting peptide tandem MS product ion intensities

scientific article published on December 2003

Design issues for cDNA microarray experiments

scientific article

Detecting genome wide haplotype sharing using SNP or microsatellite haplotype data.

scientific article

Determining epithelial contribution to in vivo mesenchymal tumour expression signature using species-specific microarray profiling analysis of xenografts.

scientific article published in February 2013

Differential regulation of native estrogen receptor-regulatory elements by estradiol, tamoxifen, and raloxifene

scientific article

Differential splicing using whole-transcript microarrays.

scientific article

Discovery and molecular characterization of a Bcl-2-regulated cell death pathway in schistosomes

scientific article

Distinct Epigenetic Signatures Delineate Transcriptional Programs during Virus-Specific CD8+ T Cell Differentiation

scientific article published in December 2014

Distinct epigenetic signatures delineate transcriptional programs during virus-specific CD8(+) T cell differentiation

scientific article published on 6 November 2014

Distribution of genomic breakpoints in chronic myeloid leukemia: analysis of 308 patients

scientific article published on 16 April 2013

Divergent lymphocyte signalling revealed by a powerful new tool for analysis of time-lapse microscopy.

scientific article

Divergent molecular networks program functionally distinct CD8 <sup>+</sup> skin-resident memory T cells

scientific article published on 30 November 2023

Drug and cell type-specific regulation of genes with different classes of estrogen receptor beta-selective agonists

scientific article published in 2009

Dysregulated IL-1β-GM-CSF Axis in Acute Rheumatic Fever That Is Limited by Hydroxychloroquine

scientific article published on 01 December 2018

Effect of vascular endothelial growth factor upregulation on retinal gene expression in the Kimba mouse.

scientific article

Enrich2: a statistical framework for analyzing deep mutational scanning data

scientific article published on 25 September 2016

Enzymic, phylogenetic, and structural characterization of the unusual papain-like protease domain of Plasmodium falciparum SERA5.

scientific article published on 17 September 2003

Estimating the fraction of invariable codons with a capture-recapture method

scientific article published on September 1, 1992

Estimation and assessment of raw copy numbers at the single locus level

scientific article published on 19 January 2008

Estimation of antigen-responsive T cell frequencies in PBMC from human subjects

scientific article published in November 1996

Estrogen receptor beta binds to and regulates three distinct classes of target genes

scientific article published on 19 April 2010

Estrogenic plant extracts reverse weight gain and fat accumulation without causing mammary gland or uterine proliferation

scientific article (publication date: 2011)

Evaluating stably expressed genes in single cells

scientific article published on 01 September 2019

Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias, and copy number variation

scientific article

Evaluation of cross-platform and interlaboratory concordance via consensus modelling of genomic measurements

scientific article published on 01 February 2019

Evidence for a common role for the serine-type Plasmodium falciparum serine repeat antigen proteases: implications for vaccine and drug design

scientific article

Evidence for a novel glaucoma locus at chromosome 3p21-22

article

Evolution and comparative analysis of the MHC Class III inflammatory region

scientific article

Evolution of the relaxin-like peptide family

scientific article

Evolution of the relaxin-like peptide family: from neuropeptide to reproduction.

scientific article published in May 2005

Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data

scientific article

Exon-level microarray analyses identify alternative splicing programs in breast cancer

scientific article

Experimental design and low-level analysis of microarray data

scientific article

Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data

scientific article

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

scientific article (publication date: April 2003)

Expression profiling in primates reveals a rapid evolution of human transcription factors

scientific article

Expression profiling of a hemopoietic cell survival transcriptome implicates osteopontin as a functional prognostic factor in AML.

scientific article published on 5 October 2009

Extended haplotype analysis in the HLA complex reveals an increased frequency of the HFE-C282Y mutation in individuals with multiple sclerosis

scientific article published on 11 March 2004

FIRMA: a method for detection of alternative splicing from exon array data

scientific article

Factorial Dispersion Models

Finding short DNA motifs using permuted Markov models.

scientific article published in July 2005

Force of infection is key to understanding the epidemiology of Plasmodium falciparum malaria in Papua New Guinean children

scientific article published on 4 June 2012

Functional genomic analysis of oligodendrocyte differentiation.

scientific article

G protein-linked signaling pathways in bipolar and major depressive disorders

scientific article published on 23 December 2013

GOstat: find statistically overrepresented Gene Ontologies within a group of genes

scientific article (publication date: 12 June 2004)

GRIDSS: sensitive and specific genomic rearrangement detection using positional de Bruijn graph assembly

GRIDSS: sensitive and specific genomic rearrangement detection using positional de Bruijn graph assembly.

scientific article

Gene expression profiling identifies activated growth factor signaling in poor prognosis (Luminal-B) estrogen receptor positive breast cancer

scientific article

Gene set enrichment analysis made simple

scientific article published on December 2009

Genes for glycosylphosphatidylinositol toxin biosynthesis in Plasmodium falciparum

scientific article

Genetic dissection of the human leukocyte antigen region by use of haplotypes of Tasmanians with multiple sclerosis

scientific article

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

scientific article

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

scientific article

Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development

article

Genome-wide analysis of glucocorticoid receptor binding regions in adipocytes reveal gene network involved in triglyceride homeostasis

scientific article

Genome-wide analysis of glucocorticoid receptor-binding sites in myotubes identifies gene networks modulating insulin signaling

scientific article

Genomic profiling and expression studies reveal both positive and negative activities for the Drosophila Myb MuvB/dREAM complex in proliferating cells

scientific article

Global analyses of mRNA translational control during early Drosophila embryogenesis

scientific article published in January 2007

High-quality DNA sequence capture of 524 disease candidate genes

scientific article

How data analysis affects power, reproducibility and biological insight of RNA-seq studies in complex datasets

scientific article

Id2-mediated inhibition of E2A represses memory CD8+ T cell differentiation

scientific article

Identification and stoichiometry of glycosylphosphatidylinositol-anchored membrane proteins of the human malaria parasite Plasmodium falciparum

scientific article (publication date: July 2006)

Identification of cancer sex-disparity in the functional integrity of p53 and its X chromosome network

scientific article published on 26 November 2019

Identification of candidate growth promoting genes in ovarian cancer through integrated copy number and expression analysis

scientific article

Identification of proteins from Plasmodium falciparum that are homologous to reticulocyte binding proteins in Plasmodium vivax

scientific article

Identification of rare DNA variants in mitochondrial disorders with improved array-based sequencing

scientific article

Identifying Differentially Expressed Genes in cDNA Microarray Experiments Authors

scientific article published on December 19, 2001

Identifying nineteenth century genealogical links from genotypes.

scientific article published on 10 May 2005

Improving linkage analysis in outcrossed forest trees - an example from Acacia mangium

scientific article published on 27 March 2002

Incorporating crossover interference into pedigree analysis using the chi 2 model

scientific article published in November 1996

Incorporating interference into linkage analysis for experimental crosses

scientific article published on 14 December 2005

Incorporating prior information into the analysis of contingency tables

scientific article published on 01 December 1988

Inner cell allocation in the mouse morula: the role of oriented division during fourth cleavage

scientific article published on January 1990

Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1

scientific article

Integrative analysis of RUNX1 downstream pathways and target genes

scientific article

International network of cancer genome projects

scientific article

Intestinal transport of monosaccharide after biliary diversion in the rat

scientific article published on 01 June 1978

Investigating and correcting plasma DNA sequencing coverage bias to enhance aneuploidy discovery

scientific article published on 29 January 2014

Joint Modeling of Mixed Plasmodium Species Infections Using a Bivariate Poisson Lognormal Model

scientific article

Lineage-specific expansion of proteins exported to erythrocytes in malaria parasites

scientific article

Long-term effect of therapeutic laser photocoagulation on gene expression in the eye.

scientific article

Mapping of the Plasmodium chabaudi resistance locus char2.

scientific article

Maps of variability in cell lineage trees

Maps of variability in cell lineage trees

scientific article published on 12 February 2019

Markov Fields and Log-Linear Interaction Models for Contingency Tables

article by J. N. Darroch et al published May 1980 in Annals of Statistics

Mathematics. A correlation for the 21st century

scientific article published in December 2011

MicroRNAs in CD4(+) T cell subsets are markers of disease risk and T cell dysfunction in individuals at risk for type 1 diabetes

scientific article published on 10 January 2016

Microarray expression profiling identifies genes with altered expression in HDL-deficient mice

scientific article

Microarrays

scientific article published on 01 December 2009

Mind the gap: analysis of marker-assisted breeding strategies for inbred mouse strains.

scientific article

Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation.

scientific article published in November 2003

Mitochondrial related gene expression changes are sensitive to agonal-pH state

article

Mitochondrial-related gene expression changes are sensitive to agonal-pH state: implications for brain disorders

scientific article

Modeling DNA base substitution in large genomic regions from two organisms.

scientific article published in January 2004

Modeling interference in genetic recombination

scientific article

Molecular analysis of gene expression in the developing pontocerebellar projection system

scientific article published in October 2002

Multiple genetic loci modify susceptibility to plasmacytoma-related morbidity in E(mu)-v-abl transgenic mice

scientific article

Multiple sclerosis risk variants regulate gene expression in innate and adaptive immune cells

scientific article published on 09 June 2020

Multiple sclerosis: a haplotype association study

scientific article published in January 2005

Multiple testing and its applications to microarrays.

scientific article

Multiple transcription factor elements collaborate with estrogen receptor alpha to activate an inducible estrogen response element in the NKG2E gene

scientific article published on 29 March 2007

Network inference using informative priors

scholarly article

Neuron-specific mRNA complexity responses during hippocampal apoptosis after traumatic brain injury.

scientific article published in March 2004

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

scientific article

Normalization of RNA-seq data using factor analysis of control genes or samples

scientific article

Normalization of cDNA microarray data

scientific article (publication date: December 2003)

Normalizing and integrating metabolomics data

scientific article

On gene ranking using replicated microarray time course data

scientific article

On genetic map functions

scientific article

On the Application of Probability Theory to Agricultural Experiments. Essay on Principles. Section 9

On the utility of data from the International HapMap Project for Australian association studies.

scientific article

Over- and underrepresentation of short DNA words in herpesvirus genomes

scientific article

PIK3CA mutations associated with gene signature of low mTORC1 signaling and better outcomes in estrogen receptor-positive breast cancer

scientific article

Phat--a gene finding program for Plasmodium falciparum

scientific article published in December 2001

Poor prognosis in familial acute myeloid leukaemia with combined biallelic CEBPA mutations and downstream events affecting the ATM, FLT3 and CDX2 genes

scientific article published on 29 April 2010

Power and robustness of a score test for linkage analysis of quantitative traits using identity by descent data on sib pairs

scientific article

Power calculations for selective genotyping in QTL mapping in backcross mice

scientific article published on 01 October 2004

Power of a score test for quantitative trait linkage analysis of relative pairs

scientific article published in January 2000

Predicting progress in directed mapping projects.

scientific article published in November 1994

Protocol matters: which methylome are you actually studying?

scientific article

Proximal genomic localization of STAT1 binding and regulated transcriptional activity

scientific article

Publisher Correction: Single-cell profiling of breast cancer T cells reveals a tissue-resident memory subset associated with improved prognosis

scientific article published on 01 December 2018

RLE plots: Visualizing unwanted variation in high dimensional data

scientific article

Reconstructing an ancestral mammalian immune supercomplex from a marsupial major histocompatibility complex

scientific article published in March 2006

Regulation of apicomplexan actin-based motility

scientific article published on August 2006

Regulation of specific target genes and biological responses by estrogen receptor subtype agonists

scientific article

Relative efficiencies of chi 2 models of recombination for exclusion mapping and gene ordering

scientific article

Relative efficiencies of the chi-square recombination models for gene mapping with human pedigree data

scientific article

Removal of unwanted variation reveals novel patterns of gene expression linked to sleep homeostasis in murine cortex

scientific article

Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data

scientific article

Replication of KIAA0350, IL2RA, RPL5 and CD58 as multiple sclerosis susceptibility genes in Australians

scientific article published on 24 July 2008

Reproductive failure and the major histocompatibility complex

scientific article (publication date: June 1995)

Reticulocyte and erythrocyte binding-like proteins function cooperatively in invasion of human erythrocytes by malaria parasites

scientific article

Robustness of the no-interference model for ordering genetic markers

scientific article published on April 1992

Rooting a phylogenetic tree with nonreversible substitution models

scientific article

SNP mapping and candidate gene sequencing in the class I region of the HLA complex: searching for multiple sclerosis susceptibility genes in Tasmanians

scientific article published on 30 October 2007

SNPs in putative regulatory regions identified by human mouse comparative sequencing and transcription factor binding site data

scientific article

SNPs on Chips: The Hidden Genetic Code in Expression Arrays

scientific article published on 11 May 2006

SOME STEP-DOWN PROCEDURES CONTROLLING THE FALSE DISCOVERY RATE UNDER DEPENDENCE.

scientific article published on January 2008

SRMA: an R package for resequencing array data analysis

scientific article

Signatures of tumour immunity distinguish Asian and non-Asian gastric adenocarcinomas.

scientific article

Silencing of odorant receptor genes by G protein βγ signaling ensures the expression of one odorant receptor per olfactory sensory neuron.

scientific article

Single-cell profiling of breast cancer T cells reveals a tissue-resident memory subset associated with improved prognosis

scientific article published on 25 June 2018

Sir2 paralogues cooperate to regulate virulence genes and antigenic variation in Plasmodium falciparum

scientific article (publication date: 14 April 2009)

Sparse combinatorial inference with an application in cancer biology

scientific article

Spatial patterns of gene expression in the olfactory bulb

scholarly article

Spotted long oligonucleotide arrays for human gene expression analysis.

scientific article published on 12 June 2003

Statistical Issues in cDNA Microarray Data Analysis

scientific article published on January 1, 2003

Statistical analysis of chromatid interference.

scientific article

Statistical analysis of crossover interference using the chi-square model

scientific article

Statistical analysis of half-tetrads

scientific article

Statistical analysis of metabolomics data.

scientific article

Statistical analysis of ordered tetrads.

scientific article

Statistical methods for handling unwanted variation in metabolomics data

scientific article

Statistical modeling of sequencing errors in SAGE libraries

scientific article

Strategies to enable large-scale proteomics for reproducible research

scientific article published on 30 July 2020

Subcompartmentalisation of proteins in the rhoptries correlates with ordered events of erythrocyte invasion by the blood stage malaria parasite

scientific article (publication date: 2012)

Subtype and pathway specific responses to anticancer compounds in breast cancer

scientific article published on 14 October 2011

Summaries of Affymetrix GeneChip probe level data

scientific article (publication date: 15 February 2003)

Summarizing and correcting the GC content bias in high-throughput sequencing

scientific article (publication date: May 2012)

Systematic noise degrades gene co-expression signals but can be corrected

scientific article published on 24 September 2015

Teaching Statistics Theory through Applications

Temporal global expression data reveal known and novel salicylate-impacted processes and regulators mediating powdery mildew growth and reproduction on Arabidopsis

scientific article

Testing for segregation distortion in the HLA complex

scientific article published in December 1994

Tests of random mating for a highly polymorphic locus: application to HLA data

scientific article published on September 1995

The N-terminal domains of SOCS proteins: a conserved region in the disordered N-termini of SOCS4 and 5.

scientific article published in March 2012

The Subclonal Architecture of Metastatic Breast Cancer: Results from a Prospective Community-Based Rapid Autopsy Program "CASCADE".

scientific article

The comparative roles of suppressor of cytokine signaling-1 and -3 in the inhibition and desensitization of cytokine signaling

scientific article published on 10 February 2006

The current state of multiple sclerosis genetic research

scientific article

The effects of genotyping errors and interference on estimation of genetic distance

scientific article published on 01 March 1997

The healthy ageing gene expression signature for Alzheimer's disease diagnosis: a random sampling perspective

scientific article published on 25 July 2018

The limits of random fingerprinting

scientific article

The microarray: potential applications for ophthalmic research

scientific article

The power of two-locus affected sib-pair linkage analysis to detect interacting disease loci

scientific article

The serine repeat antigen (SERA) gene family phylogeny in Plasmodium: the impact of GC content and reconciliation of gene and species trees

scientific article

The wound repair response controls outcome to cutaneous leishmaniasis.

scientific article

Time for DNA disclosure

scientific article

Tissue-specific regulation of genes by estrogen receptors.

scientific article published on 23 January 2012

Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm

scientific article

TumorBoost: normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays

scientific article

Unifying gene expression measures from multiple platforms using factor analysis

scientific article

Unliganded estrogen receptor-beta regulation of genes is inhibited by tamoxifen

scientific article

Using control genes to correct for unwanted variation in microarray data

scientific article

Using long-read sequencing to detect imprinted DNA methylation

scientific article published on 01 May 2019

What can Bioinformatics do for Parasitology Research?

scientific article published on 01 September 1998

scClassify: sample size estimation and multiscale classification of cells using single and multiple reference

scientific article published on 01 June 2020

scMerge leverages factor analysis, stable expression, and pseudoreplication to merge multiple single-cell RNA-seq datasets

scientific article published on 26 April 2019