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List of works by Taekjip Ha

5'-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase

scientific article published on 28 September 2010

A Chemical Controller of SNARE-Driven Membrane Fusion That Primes Vesicles for Ca(2+)-Triggered Millisecond Exocytosis

scientific article

A Coarse-Grained Model of Unstructured Single-Stranded DNA Derived from Atomistic Simulation and Single-Molecule Experiment.

scientific article

A Helicase with an Extra Spring in Its Step

scientific article published on October 12, 2012

A comparative study of multivariate and univariate hidden Markov modelings in time-binned single-molecule FRET data analysis

scientific article

A dendritic single-molecule fluorescent probe that is monovalent, photostable and minimally blinking

scientific article

A four-way junction accelerates hairpin ribozyme folding via a discrete intermediate

scientific article

A genetically encoded fluorescent tRNA is active in live-cell protein synthesis

scientific article

A parameter estimation method for fluorescence lifetime data

scientific article

A practical guide to single-molecule FRET

scientific article

A price to pay for relaxed substrate specificity: a comparative kinetic analysis of the class II lanthipeptide synthetases ProcM and HalM2.

scientific article

A promiscuous DNA packaging machine from bacteriophage T4

scientific article

A rule of seven in Watson-Crick base-pairing of mismatched sequences.

scientific article

A single vesicle-vesicle fusion assay for in vitro studies of SNAREs and accessory proteins

scientific article

A single-molecule view of chaperonin cooperativity.

scientific article

A single-vesicle content mixing assay for SNARE-mediated membrane fusion

scientific article

A survey of single-molecule techniques in chemical biology

scientific article published on January 2007

ALS/FTLD-Linked Mutations in FUS Glycine Residues Cause Accelerated Gelation and Reduced Interactions with Wild-Type FUS

scientific article published on 27 October 2020

ALS/FTLD-Linked Mutations in FUS Glycine Residues Cause Accelerated Gelation and Reduced Interactions with Wild-Type FUS

scientific article published on 01 December 2020

ATPase-driven oligomerization of RIG-I on RNA allows optimal activation of type-I interferon

scientific article published on 12 July 2013

Acidification of the oxygen scavenging system in single-molecule fluorescence studies: in situ sensing with a ratiometric dual-emission probe

scientific article published on July 2010

Activated GTPase movement on an RNA scaffold drives co-translational protein targeting

scientific article

Advances in mass spectrometry for biological science

scientific article published on 28 September 2010

Advances in single-molecule fluorescence methods for molecular biology

scientific article published on January 2008

Allosteric Regulation of E-Cadherin Adhesion.

scientific article

An entirely specific type I A-kinase anchoring protein that can sequester two molecules of protein kinase A at mitochondria

scientific journal article

An improved surface passivation method for single-molecule studies

scientific article

Analysis of single-molecule FRET trajectories using hidden Markov modeling

scientific article

Antibiotics that bind to the A site of the large ribosomal subunit can induce mRNA translocation.

scientific article

Antiparallel EmrE exports drugs by exchanging between asymmetric structures

scientific article

Assembly of the five-way junction in the ribosomal small subunit using hybrid MD-Gō simulations

scientific article

Asymmetric unwrapping of nucleosomes under tension directed by DNA local flexibility

scientific article published on March 2015

BEND3 represses rDNA transcription by stabilizing a NoRC component via USP21 deubiquitinase

scientific article

BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation

scientific article published on 22 January 2009

Biomolecular structures: from isolated molecules to the cell crowded medium

scientific article published on 17 March 2010

Biophysics. Ultraslow relaxation of confined DNA.

scientific article published on July 2014

Branch migration enzyme as a Brownian ratchet.

scientific article published on 29 May 2008

Bridging conformational dynamics and function using single-molecule spectroscopy.

scientific article

C2AB: a molecular glue for lipid vesicles with a negatively charged surface

scientific article

COL2A1 Is a Novel Biomarker of Melanoma Tumor Repopulating Cells

scientific article published on 18 September 2020

Cas9 deactivation with photocleavable guide RNAs

scientific article published on 03 March 2021

Cdc42-dependent modulation of rigidity sensing and cell spreading in tumor repopulating cells

scientific article published on 16 April 2018

Complexin and Ca2+ stimulate SNARE-mediated membrane fusion

scientific article published on 15 June 2008

Conformational flexibility of four-way junctions in RNA.

scientific article published on February 2004

Conformational model of the Holliday junction transition deduced from molecular dynamics simulations

scientific article

Constructing modular and universal single molecule tension sensor using protein G to study mechano-sensitive receptors.

scientific article published on 15 February 2016

Contractility kits promote assembly of the mechanoresponsive cytoskeletal network

scientific article published on 16 January 2019

Cooperative conformational transitions keep RecA filament active during ATPase cycle

scientific article

Coordinating DNA replication by means of priming loop and differential synthesis rate

scientific article published on 18 November 2009

Correction to Multivector Fluorescence Analysis of the xpt Guanine Riboswitch Aptamer Domain and the Conformational Role of Guanine.

scientific article

Correction to Reversible and Controllable Nanolocomotionof an RNA-Processing Machinery.

scientific article published on 22 March 2013

Correction: RecA filament sliding on DNA facilitates homology search.

scientific article published on 20 February 2013

Correlating Transcription Initiation and Conformational Changes by a Single-Subunit RNA Polymerase with Near Base-Pair Resolution

scientific article published on 01 May 2018

Crosstalk between the cGAS DNA sensor and Beclin-1 autophagy protein shapes innate antimicrobial immune responses

scientific article published on February 2014

Crystal structure and ligand-induced folding of the SAM/SAH riboswitch

scientific article published on 10 June 2020

Cytosolic viral sensor RIG-I is a 5'-triphosphate-dependent translocase on double-stranded RNA.

scientific article

DNA nanotechnology: A nanomachine goes live

scientific article

DNA-binding orientation and domain conformation of the E. coli rep helicase monomer bound to a partial duplex junction: single-molecule studies of fluorescently labeled enzymes.

scientific article published in February 2004

Defining Single Molecular Forces Required for Notch Activation Using Nano Yoyo.

scientific article published on 11 May 2016

Defining single molecular forces required to activate integrin and notch signaling

scientific article published on May 2013

Defocused orientation and position imaging (DOPI) of myosin V.

scientific article

Designing a nine cysteine-less DNA packaging motor from bacteriophage T4 reveals new insights into ATPase structure and function

scientific article published on 16 October 2014

Detecting intramolecular conformational dynamics of single molecules in short distance range with subnanometer sensitivity

scientific article published on 27 October 2011

Determinants of target prioritization and regulatory hierarchy for the bacterial small RNA SgrS

scientific article published on 06 August 2019

Determination of single-molecule loading rate during mechanotransduction in cell adhesion

scientific article published on 21 March 2024

Direct Visualization of Helicase Dynamics Using Fluorescence Localization and Optical Trapping.

scientific article published on 27 October 2016

Direct evidence for sequence-dependent attraction between double-stranded DNA controlled by methylation

scientific article published on 22 March 2016

Direct imaging of single UvrD helicase dynamics on long single-stranded DNA

scientific article

Discrete and heterogeneous rotational dynamics of single membrane probe dyes in gel phase supported lipid bilayer

scientific article published on 01 February 2004

Dissecting metal ion-dependent folding and catalysis of a single DNAzyme

scientific article

Distinct mechanisms regulating mechanical force-induced Ca²⁺ signals at the plasma membrane and the ER in human MSCs.

scientific article

Dual-color three-dimensional STED microscopy with a single high-repetition-rate laser

scientific article published on June 2015

Dynamic association of ORCA with prereplicative complex components regulates DNA replication initiation.

scientific article published on 29 May 2012

Dynamic growth and shrinkage govern the pH dependence of RecA filament stability

scientific article published on 21 January 2015

Dynamic look at DNA unwinding by a replicative helicase.

scientific article published on 18 February 2014

Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein.

scientific article published on 5 April 2007

Dynamics of major histocompatibility complex class I association with the human peptide-loading complex

scientific article

E. coli Rep helicase and RecA recombinase unwind G4 DNA and are important for resistance to G4-stabilizing ligands

scientific article published on 25 May 2020

Early steps of supported bilayer formation probed by single vesicle fluorescence assays

scientific article published on December 2002

Ebola Virus Does Not Induce Stress Granule Formation during Infection and Sequesters Stress Granule Proteins within Viral Inclusions

scientific article published on June 2016

Editorial Overview: Single-Molecule Approaches up to Difficult Challenges in Folding and Dynamics

scientific article published on 27 December 2017

Editorial on nanobiology

scientific article published on 03 May 2011

Effects of DNA replication on mRNA noise.

scientific article

Effects of cytosine modifications on DNA flexibility and nucleosome mechanical stability

scientific article published on 24 February 2016

Elastic coupling between RNA degradation and unwinding by an exoribonuclease

scientific article published on June 2012

Engineering of functional replication protein a homologs based on insights into the evolution of oligonucleotide/oligosaccharide-binding folds

scientific article

Erratum: SSB protein diffusion on single-stranded DNA stimulates RecA filament formation

scientific article published in Nature

Evolution of protein-coupled RNA dynamics during hierarchical assembly of ribosomal complexes.

scientific article published on 8 September 2017

Exploring rare conformational species and ionic effects in DNA Holliday junctions using single-molecule spectroscopy

scientific article published on 01 August 2004

Extreme bendability of DNA less than 100 base pairs long revealed by single-molecule cyclization.

scientific article published on August 2012

Extreme conformational diversity in human telomeric DNA

scientific article published on 19 December 2005

Extreme mechanical diversity of human telomeric DNA revealed by fluorescence-force spectroscopy

scientific article published on 03 April 2019

FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices

scientific article

Femtosecond tunneling response of surface plasmon polaritons

Fight against background noise in stimulated emission depletion nanoscopy

scientific article published on 05 July 2019

Flipping nanoscopy on its head

scientific article published in February 2017

Fluorescence spectroscopy of single-molecule dynamics and its biological applications

scientific article published on 24 April 1998

Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction

scientific article published on October 2007

Fluorescent Lifetime Trajectories of a Single Fluorophore Reveal Reaction Intermediates During Transcription Initiation.

scientific article published on 25 August 2009

Fluorescent lifetime trajectories of a single fluorophore reveal reaction intermediates during transcription initiation

scientific article published on July 2009

Following movement of the L1 stalk between three functional states in single ribosomes.

scholarly article

Force-dependent trans-endocytosis by breast cancer cells depletes costimulatory receptor CD80 and attenuates T cell activation

scientific article published on 17 June 2020

Force-fluorescence spectroscopy at the single-molecule level

article

Forcing a connection: impacts of single-molecule force spectroscopy on in vivo tension sensing

scientific article

Fueling protein DNA interactions inside porous nanocontainers.

scholarly article

Functional analysis of multiple single-stranded DNA-binding proteins from Methanosarcina acetivorans and their effects on DNA synthesis by DNA polymerase BI.

scientific article

Functional instability allows access to DNA in longer transcription Activator-Like effector (TALE) arrays

scientific article published on 27 February 2019

Fusion pore formation and expansion induced by Ca2+ and synaptotagmin 1.

scientific article published on 8 January 2013

G-quadruplex DNA bound by a synthetic ligand is highly dynamic

scientific article published on September 2009

Genome oligopaint via local denaturation fluorescence in situ hybridization

scientific article published on 02 March 2021

Hexameric helicase G40P unwinds DNA in single base pair steps

scientific article published on 28 January 2019

Homochirality and the origin of life. Editorial of the PCCP themed issue

scientific article

How directional translocation is regulated in a DNA helicase motor

scientific article

How nanocrystals lost their blink

scientific article published in Nature

Human Rad52 binds and wraps single-stranded DNA and mediates annealing via two hRad52-ssDNA complexes

scientific article

Human Rad52-mediated homology search and annealing occurs by continuous interactions between overlapping nucleoprotein complexes

scholarly article

Imaging and identifying impurities in single-molecule FRET studies

scientific article published on 01 October 2012

In Planta Single-Molecule Pull-Down Reveals Tetrameric Stoichiometry of HD-ZIPIII:LITTLE ZIPPER Complexes

scientific article published on 6 July 2016

Inching over hurdles: how DNA helicases move on crowded lattices

scientific article published on 06 May 2010

Increasing kinase domain proximity promotes MST2 autophosphorylation during Hippo signaling

scientific article published on 29 September 2020

Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase

scientific article published in October 2002

Insight into helicase mechanism and function revealed through single-molecule approaches

scientific article published on May 2010

Integrin Molecular Tension within Motile Focal Adhesions

scientific article

Interhead distance measurements in myosin VI via SHRImP support a simplified hand-over-hand model

scientific article

Junction resolving enzymes use multivalency to keep the Holliday junction dynamic

scientific article published on 21 January 2019

Just Took a DNA Test, Turns Out 100% Not That Phase

scientific article published on 01 April 2020

Kaposi's Sarcoma-Associated Herpesvirus Viral Interferon Regulatory Factor 4 (vIRF4) Perturbs the G1-S Cell Cycle Progression via Deregulation of the cyclin D1 Gene

scientific article published on 21 October 2015

Kaposi's sarcoma-associated herpesvirus viral interferon regulatory factor 4 (vIRF4) targets expression of cellular IRF4 and the Myc gene to facilitate lytic replication.

scientific article published on 11 December 2013

Labeling DNA (or RNA) for single-molecule FRET

Labeling proteins for single-molecule FRET.

scientific article published in September 2012

Light-controlled twister ribozyme with single-molecule detection resolves RNA function in time and space

scientific article published on 19 May 2020

MCM forked substrate specificity involves dynamic interaction with the 5'-tail

scientific article published on 20 September 2007

Mapping cell surface adhesion by rotation tracking and adhesion footprinting.

scientific article

Matrix softness regulates plasticity of tumour-repopulating cells via H3K9 demethylation and Sox2 expression

scientific article

Measuring mechanical tension across vinculin reveals regulation of focal adhesion dynamics

scientific article

Mechanism of polypurine tract primer generation by HIV-1 reverse transcriptase

scientific article published on 9 November 2017

Mechanisms of improved specificity of engineered Cas9s revealed by single-molecule FRET analysis.

scientific article published on 5 April 2018

Metals induce transient folding and activation of the twister ribozyme

scientific article published on 21 August 2017

Methanosarcina acetivorans flap endonuclease 1 activity is inhibited by a cognate single-stranded-DNA-binding protein

scientific article published in September 2006

Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.

scientific article

Mimicking Co-Transcriptional RNA Folding Using a Superhelicase

scientific article published on 03 August 2018

Molecular mechanism of sequence-dependent stability of RecA filament.

scientific article published on 26 June 2013

Monovalent, clickable, uncharged, water-soluble perylenediimide-cored dendrimers for target-specific fluorescent biolabeling

scientific article

Multimodal optical sensing and analyte specificity using single-walled carbon nanotubes

scientific article published on 14 December 2008

Multiple intermediates in SNARE-induced membrane fusion

scientific article

Multivector fluorescence analysis of the xpt guanine riboswitch aptamer domain and the conformational role of guanine

scientific article

Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization

scientific article (publication date: 27 June 2003)

Nanomechanics and co-transcriptional folding of Spinach and Mango

scientific article published on 20 September 2019

Nanoscale mechanics guides cellular decision making

scientific article published on August 2016

Natural antisense RNA promotes 3' end processing and maturation of MALAT1 lncRNA

scientific article published on 29 January 2016

Near-complete suppression of quantum dot blinking in ambient conditions

scientific article published in February 2004

Need for speed: mechanical regulation of a replicative helicase.

scientific article published on June 2007

Nonblinking and long-lasting single-molecule fluorescence imaging

scientific article published on 01 October 2006

Notch-Jagged complex structure implicates a catch bond in tuning ligand sensitivity.

scientific article published on 2 March 2017

Nuclear speckle fusion via long-range directional motion regulates speckle morphology after transcriptional inhibition

scientific article published on 17 April 2019

Nucleosomes undergo slow spontaneous gaping

scientific article published on 30 March 2015

ORCA/LRWD1 Regulates Homologous Recombination at ALT-Telomeres by Modulating Heterochromatin Organization

scientific article published on 18 April 2020

Objective-type total internal reflection microscopy (emission) for single-molecule FRET

scientific article published on 01 November 2012

Objective-type total internal reflection microscopy (excitation) for single-molecule FRET.

scientific article

Observation of internal cleavage and ligation reactions of a ribozyme

scientific article published on 10 October 2004

Observing spontaneous branch migration of Holliday junctions one step at a time

scientific article

One influenza virus particle packages eight unique viral RNAs as shown by FISH analysis

scientific article

Opening-closing dynamics of the mitochondrial transcription pre-initiation complex

scientific article published on 12 September 2011

Orientation dependence in fluorescent energy transfer between Cy3 and Cy5 terminally attached to double-stranded nucleic acids

scholarly article

PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps

scientific article

Periodic DNA patrolling underlies diverse functions of Pif1 on R-loops and G-rich DNA.

scientific article published on 29 April 2014

Photodestruction intermediates probed by an adjacent reporter molecule

scientific article published on 5 June 2003

Photophysics of fluorescent probes for single-molecule biophysics and super-resolution imaging

scientific article

Plantazolicin is an ultra-narrow spectrum antibiotic that targets the Bacillus anthracis membrane.

scientific article published on 23 December 2015

Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study

scientific article published on 31 August 2018

Preparing sample chambers for single-molecule FRET

scientific article published on 01 October 2012

PriC-mediated DNA replication restart requires PriC complex formation with the single-stranded DNA-binding protein

scientific article published on 29 April 2013

Prism-type total internal reflection microscopy for single-molecule FRET

scientific article published on 01 December 2012

Probing Nature's Nanomachines One Molecule at a Time

scientific article published on March 2016

Probing Single Helicase Dynamics on Long Nucleic Acids Through Fluorescence-Force Measurement.

scientific article published in January 2017

Probing cellular protein complexes using single-molecule pull-down

scientific article published on May 2011

Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy

scientific article

Protein structure. Direct observation of structure-function relationship in a nucleic acid-processing enzyme

scientific article

Protein structure. Engineering of a superhelicase through conformational control

scientific article

Protein-guided RNA dynamics during early ribosome assembly.

scientific article published on 12 February 2014

Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study

scholarly article by Björn Hellenkamp published in October 2018

Quantitative analysis of multilayer organization of proteins and RNA in nuclear speckles at super resolution.

scientific article published on 13 November 2017

Quantitative fluorescence labeling of aldehyde-tagged proteins for single-molecule imaging

scientific article

RNA biochemistry. Determination of in vivo target search kinetics of regulatory noncoding RNA.

scientific article

RNA fluorescence in situ hybridization in cultured mammalian cells.

scientific article published in January 2015

RNA folding and the origins of catalytic activity in the hairpin ribozyme.

scientific article published on 4 December 2006

Real-time monitoring of single ZTP riboswitches reveals a complex and kinetically controlled decision landscape

scientific article published on 10 September 2020

Real-time observation of DNA recognition and rejection by the RNA-guided endonuclease Cas9.

scientific article published on 14 September 2016

Real-time observation of DNA target interrogation and product release by the RNA-guided endonuclease CRISPR Cpf1 (Cas12a)

scientific article published on 07 May 2018

Real-time observation of G-quadruplex dynamics using single-molecule FRET microscopy

scientific article

Real-time observation of RecA filament dynamics with single monomer resolution.

scientific article

Real-time observation of strand exchange reaction with high spatiotemporal resolution

scientific article

Real-time observation of the transition from transcription initiation to elongation of the RNA polymerase

scientific article

RecA filament sliding on DNA facilitates homology search

scientific article published on December 13, 2012

Relaxed rotational and scrunching changes in P266L mutant of T7 RNA polymerase reduce short abortive RNAs while delaying transition into elongation.

scientific article

Repetitive shuttling of a motor protein on DNA.

scientific article

Reverse-chaperoning activity of an AAA+ protein.

scientific article

Reversible and controllable nanolocomotion of an RNA-processing machinery

scientific article published on 17 November 2010

Roles of RIG-I N-terminal tandem CARD and splice variant in TRIM25-mediated antiviral signal transduction

scholarly article

Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding

scientific article

Rtt105 regulates RPA function by configurationally stapling the flexible domains

scientific article published in 2022

Rupture force of cell adhesion ligand tethers modulates biological activities of a cell-laden hydrogel.

scientific article published on 25 February 2016

SSB functions as a sliding platform that migrates on DNA via reptation.

scientific article

SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

scientific article published on 11 October 2009

Seeing a molecular machine self-renew.

scientific article

Single molecular force across single integrins dictates cell spreading

scientific article

Single molecule analysis of Thermus thermophilus SSB protein dynamics on single-stranded DNA

scientific article published on 25 December 2013

Single molecule analysis of effects of non-canonical guide RNAs and specificity-enhancing mutations on Cas9-induced DNA unwinding

scientific article published on 01 December 2019

Single molecule nanocontainers made porous using a bacterial toxin.

scientific article published on October 2009

Single molecule nanometronome

scientific article published on March 2006

Single-Molecule Analysis and Engineering of DNA Motors

scientific article published on 29 October 2019

Single-Molecule Analysis of Lipid-Protein Interactions in Crude Cell Lysates

scientific article published on 25 March 2016

Single-Molecule FRET Analysis of Replicative Helicases

scientific article published on 01 January 2018

Single-Molecule Studies of ssDNA-Binding Proteins Exchange

scientific article published in February 2018

Single-Vesicle Fusion Assay Reveals Munc18-1 Binding to the SNARE Core Is Sufficient for Stimulating Membrane Fusion

scientific article

Single-cell analysis of early antiviral gene expression reveals a determinant of stochastic IFNB1 expression

scientific article published on 3 November 2017

Single-molecule FRET analysis of helicase functions

scientific article published on 01 January 2010

Single-molecule FRET reveals the native-state dynamics of the IκBα ankyrin repeat domain

scientific article published on 22 April 2013

Single-molecule FRET with total internal reflection microscopy

scientific article published on 01 December 2012

Single-molecule analysis of SSB dynamics on single-stranded DNA.

scientific article published in January 2012

Single-molecule analysis reveals differential effect of ssDNA-binding proteins on DNA translocation by XPD helicase

scientific article

Single-molecule analysis reveals three phases of DNA degradation by an exonuclease

scientific article

Single-molecule approaches embrace molecular cohorts

scientific article

Single-molecule centroid localization algorithm improves the accuracy of fluorescence binding assays

scientific article published on 19 February 2018

Single-molecule conformational analysis of G-quadruplex formation in the promoter DNA duplex of the proto-oncogene c-kit.

scientific article

Single-molecule fluorescence microscopy of native macromolecular complexes

scientific article published on 20 September 2016

Single-molecule fluorescence reveals the unwinding stepping mechanism of replicative helicase.

scientific article published on 13 March 2014

Single-molecule four-color FRET.

scientific article published on December 2010

Single-molecule high-resolution imaging with photobleaching

scientific article

Single-molecule imaging reveals the translocation and DNA looping dynamics of hepatitis C virus NS3 helicase.

scientific article

Single-molecule imaging: a collagenase pauses before embarking on a killing spree

scientific article published in June 2012

Single-molecule methods leap ahead

scientific article published in October 2014

Single-molecule nanometry for biological physics

scientific article published on 18 December 2012

Single-molecule nanopositioning: structural transitions of a helicase-DNA complex during ATP hydrolysis

scientific article

Single-molecule optical spectroscopy.

scientific article

Single-molecule packaging initiation in real time by a viral DNA packaging machine from bacteriophage T4.

scientific article

Single-molecule pull-down (SiMPull) for new-age biochemistry: methodology and biochemical applications of single-molecule pull-down (SiMPull) for probing biomolecular interactions in crude cell extracts

scientific article

Single-molecule pull-down for studying protein interactions.

scientific article

Single-molecule quantum-dot fluorescence resonance energy transfer

scientific article published in May 2005

Single-molecule three-color FRET

scientific article

Single-molecule views of protein movement on single-stranded DNA.

scientific article published on 23 February 2012

Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA.

scientific article published on 26 January 2007

Sphingolipids facilitate age asymmetry of membrane proteins in dividing yeast cells

scientific article published on 2 August 2017

Spider Silk Peptide Is a Compact, Linear Nanospring Ideal for Intracellular Tension Sensing

scientific article

Spontaneous intersubunit rotation in single ribosomes.

scientific article

Spring-loaded mechanism of DNA unwinding by hepatitis C virus NS3 helicase

scientific article

Stepwise translocation of nucleic acid motors.

scientific article published on 12 January 2010

Stereospecific effects determine the structure of a four-way DNA junction

scientific article published in February 2005

Stoichiometry and assembly of mTOR complexes revealed by single-molecule pulldown

scientific article

Strategy for Compositional Analysis of the Hair Cell Mechanotransduction Complex Using TIRF Microscopy

scientific article published on 05 August 2019

Streamlining effects of extra telomeric repeat on telomeric DNA folding revealed by fluorescence-force spectroscopy

scientific article published on 01 December 2019

Structural Mechanisms of Cooperative DNA Binding by Bacterial Single-Stranded DNA-Binding Proteins

scientific article published on 22 November 2018

Structural basis for DNA unwinding at forked dsDNA by two coordinating Pif1 helicases

scientific article published on 26 November 2019

Structural biology: Growth factor rattled out of its cage.

scientific article published on 25 January 2017

Structural dynamics and processing of nucleic acids revealed by single-molecule spectroscopy

scientific article published on April 2004

Structural dynamics of individual Holliday junctions

scientific article published in February 2003

Structural dynamics of potassium-channel gating revealed by single-molecule FRET.

scientific article

Structural mechanisms of PriA-mediated DNA replication restart

scientific article

Structure-based model of the stepping motor of PcrA helicase

scientific article

Surfaces and orientations: much to FRET about?

scientific article

TGFβ1 reinforces arterial aging in the vascular smooth muscle cell through a long-range regulation of the cytoskeletal stiffness

scientific article published on 8 February 2018

Tandem Spinach Array for mRNA Imaging in Living Bacterial Cells

scientific article published on 27 November 2015

Targeting DNA G-quadruplexes with helical small molecules

scientific article

Temperature-independent porous nanocontainers for single-molecule fluorescence studies

scientific article

The SNARE complex from yeast is partially unstructured on the membrane

scientific article published on July 2008

The SOSS1 single-stranded DNA binding complex promotes DNA end resection in concert with Exo1.

scientific article

The euryarchaeota, nature's medium for engineering of single-stranded DNA-binding proteins.

scientific article

The influenza A virus PB2, PA, NP, and M segments play a pivotal role during genome packaging

scientific article

The light side of the force

scientific article published on 23 February 2016

The preRC protein ORCA organizes heterochromatin by assembling histone H3 lysine 9 methyltransferases on chromatin

scientific article published on 29 April 2015

The role of L1 stalk-tRNA interaction in the ribosome elongation cycle

scientific article

The telomere capping complex CST has an unusual stoichiometry, makes multipartite interaction with G-Tails, and unfolds higher-order G-tail structures

scientific article

Toward Single-Cell Single-Molecule Pull-Down

scientific article published on 25 May 2018

Towards a computational model of a methane producing archaeum

scientific article (publication date: 2014)

Transcription initiation in a single-subunit RNA polymerase proceeds through DNA scrunching and rotation of the N-terminal subdomains.

scientific article published on June 2008

Tyrosine phosphorylation enhances RAD52-mediated annealing by modulating its DNA binding.

scientific article

Ultrafast redistribution of E. coli SSB along long single-stranded DNA via intersegment transfer

scientific article

Ultrahigh-resolution optical trap with single-fluorophore sensitivity

scientific article

Ultrasensitivity of Cell Adhesion to the Differential Mechanical Cues and Requirement of Reversibility

Understanding the Molecular Mechanisms of the CRISPR Toolbox Using Single Molecule Approaches.

scientific article published on 2 February 2018

Understanding the photophysics of the spinach-DFHBI RNA aptamer-fluorogen complex to improve live-cell RNA imaging

scientific article published on 10 December 2013

Unraveling helicase mechanisms one molecule at a time

scientific article

Very fast CRISPR on demand

scientific article

Vesicle encapsulation studies reveal that single molecule ribozyme heterogeneities are intrinsic.

scientific article

Visualization of the nanospring dynamics of the IkappaBalpha ankyrin repeat domain in real time

scientific article

Voltage-gated sodium channels assemble and gate as dimers

scientific article published on 12 December 2017

Watching DNA breath one molecule at a time

scientific article published on 04 October 2013

Water in biological systems

scientific article published on 04 August 2010