List of works - J Andrew DeWoody

A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: Osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat) ⬇️

scientific article published on July 13, 2012

Accelerated molecular evolution in Microtus (Rodentia) as assessed via complete mitochondrial genome sequences.

scientific article published in September 2006

Amphibian malformations and inbreeding

scientific article

Comparative analysis of active retrotransposons in the transcriptomes of three species of heteromyid rodents.

scientific article published on 20 February 2015

Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencing ⬇️

scientific article published on November 23, 2011

Condition-dependent mate choice and a reproductive disadvantage for MHC-divergent male tiger salamanders.

scientific article

Demographic, environmental and genetic determinants of mating success in captive koalas (Phascolarctos cinereus)

scientific article published on 29 November 2018

Discovery and evaluation of candidate sex-determining genes and xenobiotics in the gonads of lake sturgeon (Acipenser fulvescens).

scientific article

Evidence of genetic erosion in a peripheral population of a North American game bird: the Montezuma quail (Cyrtonyx montezumae)

scientific article published on 31 August 2019

Extensive mitochondrial DNA transfer in a rapidly evolving rodent has been mediated by independent insertion events and by duplications

scientific article published on 14 July 2007

Genetic and genomic monitoring with minimally invasive sampling methods

scientific article published on 24 March 2018

Genetic load has potential in large populations but is realized in small inbred populations

scientific article published on 10 April 2021

Genetic mating systems and reproductive natural histories of fishes: lessons for ecology and evolution.

scientific article

Hosts, parasites, and horizontal gene transfer ⬇️

scientific article published on 05 June 2013

Immunomics of the koala (Phascolarctos cinereus).

scientific article published on 13 March 2015

Inferring population history and demography using microsatellites, mitochondrial DNA, and major histocompatibility complex (MHC) genes.

scientific article

Insight into the genetic components of community genetics: QTL mapping of insect association in a fast-growing forest tree

scientific article (publication date: 2013)

Insights into the mating habits of the tiger salamander (Ambystoma tigrinum tigrinum) as revealed by genetic parentage analyses

scientific article published on 01 June 2006

Island area, body size and demographic history shape genomic diversity in Darwin's finches and related tanagers

scientific article published on 26 October 2019

Life-history traits and habitat availability shape genomic diversity in birds: implications for conservation

scientific article published in 2021

Mechanistic insights into landscape genetic structure of two tropical amphibians using field-derived resistance surfaces.

scientific article

Microsatellite Markers in White-Tailed Deer ⬇️

scientific article published on July 1, 1995

Microsatellite analyses across three diverse vertebrate transcriptomes (Acipenser fulvescens, Ambystoma tigrinum, and Dipodomys spectabilis).

scientific article

Microsatellite mutation rates in the eastern tiger salamander (Ambystoma tigrinum tigrinum) differ 10-fold across loci

scientific article published on 24 December 2008

Molecular analyses of mitochondrial pseudogenes within the nuclear genome of arvicoline rodents

scientific article published on 27 February 2007

Molecular characterization of major histocompatibility complex class II alleles in wild tiger salamanders (Ambystoma tigrinum)

scientific article published on 08 November 2005

Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq

scientific article

Next-generation pyrosequencing of gonad transcriptomes in the polyploid lake sturgeon (Acipenser fulvescens): the relative merits of normalization and rarefaction in gene discovery

scientific article

Parentage analysis detects cryptic precapture dispersal in a philopatric rodent

scientific article published on 01 June 2006

Parental relatedness and major histocompatibility effects on early embryo survivorship in Atlantic salmon

scientific article published on 30 January 2009

Population genetic and genomic analyses of Western Massasauga (Sistrurus tergeminus ssp.): implications for subspecies delimitation and conservation

scientific article published on 16 November 2021

Positive selection drives the evolution of a major histocompatibility complex gene in an endangered Mexican salamander species complex.

scientific article published on 7 April 2015

Quantifying male-biased dispersal among social groups in the collared peccary (Pecari tajacu) using analyses based on mtDNA variation.

scientific article published in January 2010

Recent demographic bottlenecks are not accompanied by a genetic signature in banner-tailed kangaroo rats (Dipodomys spectabilis)

scientific article published on 01 June 2007

The effects of contig length and depth on the estimation of SNP frequencies, and the relative abundance of SNPs in protein-coding and non-coding transcripts of tiger salamanders (Ambystoma tigrinum)

scientific article

The endangered White Sands pupfish (Cyprinodon tularosa) genome reveals low diversity and heterogenous patterns of differentiation

scientific article published on 17 June 2021

The genome sequence of a widespread apex predator, the golden eagle (Aquila chrysaetos).

scientific article

The genomic proliferation of transposable elements in colonizing populations: Schistosoma mansoni in the new world

scientific article published on 14 February 2015

The impacts of inbreeding, drift and selection on genetic diversity in captive breeding populations

scientific article published on 31 December 2014

The influence of density and sex on patterns of fine-scale genetic structure.

scientific article published on 30 April 2009

The long‐standing significance of genetic diversity in conservation

scientific article published in 2021

The quantification of spermatozoa by real-time quantitative PCR, spectrophotometry, and spermatophore cap size.

scientific article

Transcriptomic characterization of the immunogenetic repertoires of heteromyid rodents

scientific article

Transgenic male mating advantage provides opportunity for Trojan gene effect in a fish.

scholarly article

Win-stay, lose-switch and public information strategies for patch fidelity of songbirds with rare extra-pair paternity.

scientific article published on March 2012

List of works by J Andrew DeWoody

A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: Osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat) ⬇️

Accelerated molecular evolution in Microtus (Rodentia) as assessed via complete mitochondrial genome sequences.

Amphibian malformations and inbreeding

Comparative analysis of active retrotransposons in the transcriptomes of three species of heteromyid rodents.

Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencing ⬇️

Condition-dependent mate choice and a reproductive disadvantage for MHC-divergent male tiger salamanders.

Demographic, environmental and genetic determinants of mating success in captive koalas (Phascolarctos cinereus)

Discovery and evaluation of candidate sex-determining genes and xenobiotics in the gonads of lake sturgeon (Acipenser fulvescens).

Evidence of genetic erosion in a peripheral population of a North American game bird: the Montezuma quail (Cyrtonyx montezumae)

Extensive mitochondrial DNA transfer in a rapidly evolving rodent has been mediated by independent insertion events and by duplications

Genetic and genomic monitoring with minimally invasive sampling methods

Genetic load has potential in large populations but is realized in small inbred populations

Genetic mating systems and reproductive natural histories of fishes: lessons for ecology and evolution.

Hosts, parasites, and horizontal gene transfer ⬇️

Immunomics of the koala (Phascolarctos cinereus).

Inferring population history and demography using microsatellites, mitochondrial DNA, and major histocompatibility complex (MHC) genes.

Insight into the genetic components of community genetics: QTL mapping of insect association in a fast-growing forest tree

Insights into the mating habits of the tiger salamander (Ambystoma tigrinum tigrinum) as revealed by genetic parentage analyses

Island area, body size and demographic history shape genomic diversity in Darwin's finches and related tanagers

Life-history traits and habitat availability shape genomic diversity in birds: implications for conservation

Mechanistic insights into landscape genetic structure of two tropical amphibians using field-derived resistance surfaces.

Microsatellite Markers in White-Tailed Deer ⬇️

Microsatellite analyses across three diverse vertebrate transcriptomes (Acipenser fulvescens, Ambystoma tigrinum, and Dipodomys spectabilis).

Microsatellite mutation rates in the eastern tiger salamander (Ambystoma tigrinum tigrinum) differ 10-fold across loci

Molecular analyses of mitochondrial pseudogenes within the nuclear genome of arvicoline rodents

Molecular characterization of major histocompatibility complex class II alleles in wild tiger salamanders (Ambystoma tigrinum)

Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq

Next-generation pyrosequencing of gonad transcriptomes in the polyploid lake sturgeon (Acipenser fulvescens): the relative merits of normalization and rarefaction in gene discovery

Parentage analysis detects cryptic precapture dispersal in a philopatric rodent

Parental relatedness and major histocompatibility effects on early embryo survivorship in Atlantic salmon

Population genetic and genomic analyses of Western Massasauga (Sistrurus tergeminus ssp.): implications for subspecies delimitation and conservation

Positive selection drives the evolution of a major histocompatibility complex gene in an endangered Mexican salamander species complex.

Quantifying male-biased dispersal among social groups in the collared peccary (Pecari tajacu) using analyses based on mtDNA variation.

Recent demographic bottlenecks are not accompanied by a genetic signature in banner-tailed kangaroo rats (Dipodomys spectabilis)

The effects of contig length and depth on the estimation of SNP frequencies, and the relative abundance of SNPs in protein-coding and non-coding transcripts of tiger salamanders (Ambystoma tigrinum)

The endangered White Sands pupfish (Cyprinodon tularosa) genome reveals low diversity and heterogenous patterns of differentiation

The genome sequence of a widespread apex predator, the golden eagle (Aquila chrysaetos).

The genomic proliferation of transposable elements in colonizing populations: Schistosoma mansoni in the new world

The impacts of inbreeding, drift and selection on genetic diversity in captive breeding populations

The influence of density and sex on patterns of fine-scale genetic structure.

The long‐standing significance of genetic diversity in conservation

The quantification of spermatozoa by real-time quantitative PCR, spectrophotometry, and spermatophore cap size.

Transcriptomic characterization of the immunogenetic repertoires of heteromyid rodents

Transgenic male mating advantage provides opportunity for Trojan gene effect in a fish.

Win-stay, lose-switch and public information strategies for patch fidelity of songbirds with rare extra-pair paternity.