Search filters

List of works by Stuart C. Ray

A 61 year-old female with a prior history of tuberculosis presenting with hemoptysis

scientific article published in April 2011

A Hepatitis C Virus Envelope Polymorphism Confers Resistance to Neutralization by Polyclonal Sera and Broadly Neutralizing Monoclonal Antibodies

scientific article

A novel assay allows genotyping of the latent reservoir for human immunodeficiency virus type 1 in the resting CD4+ T cells of viremic patients

scientific article

A sensitive genotyping assay for detection of drug resistance mutations in reverse transcriptase of HIV-1 subtypes B and C in samples stored as dried blood spots or frozen RNA extracts

article

A stable latent reservoir for HIV-1 in resting CD4(+) T lymphocytes in infected children

scientific article

A22 Phylogenetic clustering of hepatitis C virus infection among people who inject drugs in Baltimore

Accelerating drug development through collaboration: the Hepatitis C Drug Development Advisory Group

scientific article published on 22 May 2014

Acceleration of hepatitis C virus envelope evolution in humans is consistent with progressive humoral immune selection during the transition from acute to chronic infection

scientific article published on 3 March 2010

Accurate representation of the hepatitis C virus quasispecies in 5.2-kilobase amplicons

scientific article published on September 2004

Acute Hepatitis C Virus Infection Induces Consistent Changes in Circulating MicroRNAs That Are Associated with Nonlytic Hepatocyte Release

scientific article

Acute hepatitis C.

scientific article

Analyses of HIV-1 drug-resistance profiles among infected adolescents experiencing delayed antiretroviral treatment switch after initial nonsuppressive highly active antiretroviral therapy

scientific article

Analysis of HIV diversity using a high-resolution melting assay

scientific article

Analysis of genetic linkage of HIV from couples enrolled in the HIV Prevention Trials Network 052 trial

scientific article published on 11 October 2011

Antiretroviral therapy, interferon sensitivity, and virologic setpoint in human immunodeficiency virus/hepatitis C virus coinfected patients

scientific article

Assessment of hepatitis C virus sequence complexity by electrophoretic mobilities of both single-and double-stranded DNAs

scientific article

Autologous strain-specific cytolytic T lymphocyte responses directed against human immunodeficiency virus type 1 Env.

scientific article published in January 1998

Broadly Neutralizing Antibody Mediated Clearance of Human Hepatitis C Virus Infection

scholarly article published by Pamela J. Bjorkman in 2018

Broadly neutralizing antibodies with few somatic mutations and hepatitis C virus clearance

scientific article

Building Leadership Capacity for Mission Execution in a Large Academic Department of Medicine

scientific article published on 24 December 2018

CD4+ T cell depletion in an untreated HIV type 1-infected human leukocyte antigen-B*5801-positive patient with an undetectable viral load

scientific article published on April 2008

CD4+ T-Cell-Dependent Reduction in Hepatitis C Virus-Specific Neutralizing Antibody Responses After Coinfection With Human Immunodeficiency Virus

scientific article

CMPK2 and BCL-G are associated with type 1 interferon-induced HIV restriction in humans

article

Cellular immune selection with hepatitis C virus persistence in humans

scientific article

Characterization of a polyclonal cytolytic T lymphocyte response to human immunodeficiency virus in persons without clinical progression

scientific article published in June 1997

Characterization of novel recombinant HIV-1 genomes using the branching index

scientific article published on November 2003

Clearance of hepatitis C infection is associated with the early appearance of broad neutralizing antibody responses

scientific article

Complex patterns of Hepatitis-C virus longitudinal clustering in a high-risk population

scientific article published on 15 December 2017

Comprehensive analyses of CD8+ T cell responses during longitudinal study of acute human hepatitis C.

scientific article published on July 2005

Comprehensive genetic and epigenetic analysis of occult hepatitis B from liver tissue samples

scientific article

Computational reconstruction of Bole1a, a representative synthetic hepatitis C virus subtype 1a genome

scientific article

Constraints on viral evolution during chronic hepatitis C virus infection arising from a common-source exposure

scientific article

Continued production of drug-sensitive human immunodeficiency virus type 1 in children on combination antiretroviral therapy who have undetectable viral loads

scientific article published on January 2004

Control of HIV-1 in elite suppressors despite ongoing replication and evolution in plasma virus

scientific article published on 5 May 2010

Correlates of hepatitis C viral clustering among people who inject drugs in Baltimore

scientific article published on 24 October 2019

Cross-genotype immunity to hepatitis C virus

scientific article published on February 2004

Determinants of Viral Clearance and Persistence during Acute Hepatitis C Virus Infection ⬇️

scientific article (publication date: 19 November 2001)

Determinants of the quantity of hepatitis C virus RNA.

scientific article

Divergent and convergent evolution after a common-source outbreak of hepatitis C virus

scientific article

Durable SARS-CoV-2 B cell immunity after mild or severe disease

scientific article published on 30 October 2020

Dynamics of SEN virus infection among injection drug users

scientific article published on 2 October 2001

Early archiving and predominance of nonnucleoside reverse transcriptase inhibitor-resistant HIV-1 among recently infected infants born in the United States

scientific article published on 05 April 2007

Ecchymoses and eschars at sites of injection

scientific article published in The Lancet

Epidemiology of hepatitis C virus infection & liver disease among injection drug users (IDUs) in Chennai, India

scientific article

Eukaryotic start and stop translation sites.

scientific article

Evolution of human immunodeficiency virus type 1 in relation to disease progression in children.

scientific article published in March 1998

Evolution of the HIV-1 nef gene in HLA-B*57 positive elite suppressors

scientific article published on 8 November 2010

Expanded cellular clones carrying replication-competent HIV-1 persist, wax, and wane.

scientific article published on 26 February 2018

Extra-epitopic hepatitis C virus polymorphisms confer resistance to broadly neutralizing antibodies by modulating binding to scavenger receptor B1

scientific article

Factors associated with phylogenetic clustering of hepatitis C among people who inject drugs in Baltimore

scientific article published on 10 November 2020

Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination

scientific article (publication date: 1999)

G-->A hypermutation in protease and reverse transcriptase regions of human immunodeficiency virus type 1 residing in resting CD4+ T cells in vivo

scientific article

Generative optical modeling of whole blood for detecting platelets in lens-free images

scientific article published on 05 March 2020

Genetic divergence of hepatitis C virus: the role of HIV-related immunosuppression

scientific article

Genetic epidemiology of hepatitis C virus throughout egypt

scientific article

Genetic linkage of hepatitis B virus in peripheral blood leukocytes provides evidence for contamination

scientific article published on February 2010

Genome Sequencing and Analysis of Geographically Diverse Clinical Isolates of Herpes Simplex Virus 2.

scientific article published on 27 May 2015

Genomic Diversity of SARS-CoV-2 During Early Introduction into the United States National Capital Region

scientific article published on 15 August 2020

Genomic diversity of SARS-CoV-2 during early introduction into the Baltimore-Washington metropolitan area

scientific article published on 22 March 2021

Genotypic analysis of HIV-1 drug resistance at the limit of detection: virus production without evolution in treated adults with undetectable HIV loads

scientific article

Global Diversity within and between Human Herpesvirus 1 and 2 Glycoproteins

scientific article published on 27 May 2015

HIV-1 drug resistance profiles in children and adults with viral load of <50 copies/ml receiving combination therapy

scientific article published on July 2001

HIV-1 evolution following transmission to an HLA-B*5801-positive patient

scientific article published on December 2009

Healthy donor T-cell responses to common cold coronaviruses and SARS-CoV-2

scientific article published on 23 September 2020

Hepatitis C virus epitope exposure and neutralization by antibodies is affected by time and temperature

scientific article

Hepatitis C virus immune escape via exploitation of a hole in the T cell repertoire

scientific article

Hepatitis C virus infection of neuroepithelioma cell lines

scientific article published on 9 June 2010

Hepatitis C virus resistance to broadly neutralizing antibodies measured using replication-competent virus and pseudoparticles

scientific article published on 21 September 2016

High diversity of hepatitis C viral quasispecies is associated with early virological response in patients undergoing antiviral therapy

scientific article published on December 2009

High-programmed death-1 levels on hepatitis C virus-specific T cells during acute infection are associated with viral persistence and require preservation of cognate antigen during chronic infection

scientific article

Human Immunodeficiency Virus Seroconversion and Evolution of the Hepatitis C Virus Quasispecies

scientific article

Human immunodeficiency virus type 1 env and p17gag sequence variation in polymerase chain reaction-positive, seronegative injection drug users

scientific article

Human immunodeficiency virus-related microbial translocation and progression of hepatitis C.

scientific article

Humoral immune response in acute hepatitis C virus infection

scientific article

Identification of nevirapine-resistant HIV-1 in the latent reservoir after single-dose nevirapine to prevent mother-to-child transmission of HIV-1.

scientific article published on May 2009

Identification of ongoing human immunodeficiency virus type 1 (HIV-1) replication in residual viremia during recombinant HIV-1 poxvirus immunizations in patients with clinically undetectable viral loads on durable suppressive highly active antiretro

scientific article

IgM autoantibodies recognizing ACE2 are associated with severe COVID-19

scientific article published on 15 October 2020

Immune evasion by hepatitis C virus NS3/4A protease-mediated cleavage of the Toll-like receptor 3 adaptor protein TRIF

scientific article (publication date: 22 February 2005)

Immunogenicity and cross-reactivity of a representative ancestral sequence in hepatitis C virus infection

scientific article

Impact of Point-of-Care Diagnostics on Clinical Decision-making in Low- and Middle-Income Countries

Inconsistent temporal patterns of genetic variation of HCV among high-risk subjects may impact inference of transmission networks

scientific article published on 22 February 2019

Inferring viral dynamics in chronically HCV infected patients from the spatial distribution of infected hepatocytes

scientific article

Intermittent HIV-1 viremia (Blips) and drug resistance in patients receiving HAART.

scientific article

Intracellular HIV-1 RNA and CD4+ T-cell activation in patients starting antiretrovirals.

scientific article published on 29 March 2017

It's 10 pm; Do You Know Where Your Data Are? Data Provenance, Curation, and Storage

scientific article

Kupffer cells are depleted with HIV immunodeficiency and partially recovered with antiretroviral immune reconstitution

scientific article

Laser captured hepatocytes show association of butyrylcholinesterase gene loss and fibrosis progression in hepatitis C-infected drug users

scientific article

Maternal Neutralizing Antibody and Transmission of Hepatitis C Virus to Infants

scientific article (publication date: December 2008)

Molecular epidemiology of GB type C virus among individuals exposed to hepatitis C virus in Cameroon

scholarly article by Judith N. Torimiro et al published 2 April 2013 in Microbiology research

Molecular epidemiology of HIV type 1 in Singapore and identification of novel CRF01_AE/B recombinant forms

scientific article

Molecular epidemiology of HIV-1 subtypes in southern China.

scientific article

Monomer sequence determination of carbohydrates using fast-atom bombardment mass spectrometry of periodate-oxidized acetate ester derivatives

scientific article published in March 1990

Naturally selected hepatitis C virus polymorphisms confer broad neutralizing antibody resistance

scientific article

Needlestick transmission of hepatitis C.

scientific article published in May 2002

Neutralizing antibodies do not mediate suppression of human immunodeficiency virus type 1 in elite suppressors or selection of plasma virus variants in patients on highly active antiretroviral therapy

scientific article

New Therapies for Treating Hepatitis C Virus: Impact on Laboratory Testing Recommendations and Clinical Management

scientific article published on 10 October 2017

No evidence of SARS-CoV-2 reverse transcription and integration as the origin of chimeric transcripts in patient tissues

scientific article

Oral antibiotic treatment of right-sided staphylococcal endocarditis in injection drug users: Prospective randomized comparison with parenteral therapy

article

PCR detection of adenovirus in a bone marrow transplant recipient: hemorrhagic cystitis as a presenting manifestation of disseminated disease.

scientific article

Persistence of wild-type virus and lack of temporal structure in the latent reservoir for human immunodeficiency virus type 1 in pediatric patients with extensive antiretroviral exposure

scientific article

Plasma deconvolution identifies broadly neutralizing antibodies associated with hepatitis C virus clearance

scientific article published on 13 August 2019

Predominance of defective proviral sequences in an HIV + long-term non-progressor

scientific article published in June 1996

Presence in India of HIV type 1 similar to North American strains

scientific article

Progression of Fibrosis during Chronic Hepatitis C Is Associated with Rapid Virus Evolution

scientific article (publication date: June 2007)

Prospective evaluation of community-acquired acute-phase hepatitis C virus infection

scientific article

Protection against persistence of hepatitis C.

scientific article

Rapid and sensitive detection of viral nucleic acids using silicon microchips.

scientific article published on 9 May 2018

Recrudescence of treated neurosyphilis in a patient with human immunodeficiency virus

scientific article

Report from ICAAC 2000: HIV & viral co-infections

article

Residual human immunodeficiency virus type 1 viremia in some patients on antiretroviral therapy is dominated by a small number of invariant clones rarely found in circulating CD4+ T cells

scientific article

Selection pressure from neutralizing antibodies drives sequence evolution during acute infection with hepatitis C virus

scientific article

Severe pruritus after completing pegylated interferon for hepatitis C.

scientific article published in November 2008

Sex and the genetic diversity of HIV-1

article

SimPlot

software tool

Slow human immunodeficiency virus type 1 evolution in viral reservoirs in infants treated with effective antiretroviral therapy

scientific article published in March 2007

Spontaneous clearance of primary acute hepatitis C virus infection correlated with high initial viral RNA level and rapid HVR1 evolution

scientific article published on 18 April 2012

Spontaneous control of primary hepatitis C virus infection and immunity against persistent reinfection

scientific article published on 24 September 2009

Synergistic anti-HCV broadly neutralizing human monoclonal antibodies with independent mechanisms.

scientific article published on 18 December 2017

The role of viral introductions in sustaining community-based HIV epidemics in rural Uganda: evidence from spatial clustering, phylogenetics, and egocentric transmission models

scientific article (publication date: March 2014)

The transhepatic endotoxin gradient is present despite liver cirrhosis and is attenuated after transjugular portosystemic shunt (TIPS).

scientific article

Transmission of human immunodeficiency virus type 1 from a patient who developed AIDS to an elite suppressor

scientific article

Use of laser capture microdissection to map hepatitis C virus-positive hepatocytes in human liver

scientific article

Users beware! Biological variation in complete blood counts over short time intervals

scientific article published on 29 May 2019

Working Toward Acceptance of a Physician Order Entry System

scientific article published in January 1997

Paulina is supported by:

About Paulina

Help