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List of works by Stephen Quake

5-Hydroxymethylcytosine signatures in cell-free DNA provide information about tumor types and stages.

scientific article published on 18 August 2017

A Noninvasive Molecular Clock for Fetal Development Predicts Gestational Age and Preterm Delivery

A Protein Interaction Network generated from Streptococcus Pneumoniae

A Quiescent Bcl11b High Stem Cell Population Is Required for Maintenance of the Mammary Gland

scientific article

A Single-cell genome for Thiovulum sp.

scientific article

A biotic game design project for integrated life science and engineering education

scientific article (publication date: March 2015)

A cell-intrinsic role for TLR2-MYD88 in intestinal and breast epithelia and oncogenesis.

scientific article

A ligand-free solid-supported system for Sonogashira couplings: applications in nucleoside chemistry

scientific article

A microfluidic device for kinetic optimization of protein crystallization and in situ structure determination.

scientific article

A microfluidic device for preparing next generation DNA sequencing libraries and for automating other laboratory protocols that require one or more column chromatography steps

scientific article

A microfluidic oligonucleotide synthesizer

scientific article

A microfluidic processor for gene expression profiling of single human embryonic stem cells

scientific article

A microfluidic rectifier: anisotropic flow resistance at low Reynolds numbers

scientific article published on 4 March 2004

A molecular cell atlas of the human lung from single cell RNA sequencing

scientific article

A molecular cell atlas of the human lung from single-cell RNA sequencing

scientific article published on 18 November 2020

A mouse tissue atlas of small noncoding RNA

scientific article published on 25 September 2020

A nanoliter rotary device for polymerase chain reaction

scientific article published in May 2002

A nanoliter-scale nucleic acid processor with parallel architecture

scientific article published on 14 March 2004

A quantitative comparison of single-cell whole genome amplification methods

scientific article

A reusable microfluidic device provides continuous measurement capability and improves the detection limit of digital biology

scientific article published on 13 April 2016

A robust and scalable microfluidic metering method that allows protein crystal growth by free interface diffusion

scientific article

A single-parasite transcriptional atlas of Toxoplasma gondii reveals novel control of antigen expression

scientific article published on 17 February 2020

A survey of human brain transcriptome diversity at the single cell level

scientific article

A synthetic Escherichia coli predator-prey ecosystem

scientific article published on 15 April 2008

A systems approach to measuring the binding energy landscapes of transcription factors

scientific article published on January 2007

Addressing Complex Matrix Interference Improves Multiplex Food Allergen Detection by Targeted LC-MS/MS

scientific article published on 24 July 2019

Aged blood impairs hippocampal neural precursor activity and activates microglia via brain endothelial cell VCAM1

scientific article published on 13 May 2019

Ageing hallmarks exhibit organ-specific temporal signatures

scientific article published on 15 July 2020

Aging Fly Cell Atlas identifies exhaustive aging features at cellular resolution

scientific article published on 15 June 2023

An implantable microfluidic device for self-monitoring of intraocular pressure

scientific article

An in vitro microfluidic approach to generating protein-interaction networks

scientific article

An information theoretic, microfluidic-based single cell analysis permits identification of subpopulations among putatively homogeneous stem cells

scientific article

An integrated microfabricated cell sorter

scientific article

Analysis of the size distributions of fetal and maternal cell-free DNA by paired-end sequencing

scientific article published on 17 June 2010

Anomalous Vibrational Dispersion in Holographically Trapped Colloidal Arrays

scientific article published on 01 March 2006

Antigen Identification for Orphan T Cell Receptors Expressed on Tumor-Infiltrating Lymphocytes.

scientific article published on 20 December 2017

Association of reactive oxygen species levels and radioresistance in cancer stem cells

scientific article (publication date: 9 April 2009)

At the interface of physics and biology

scientific article published on 01 July 2007

Author Correction: Senescent cells promote tissue NAD<sup>+</sup> decline during ageing via the activation of CD38<sup>+</sup> macrophages

scientific article published on 10 December 2020

Automated microfluidic chromatin immunoprecipitation from 2,000 cells.

scientific article published on 27 February 2009

B cell repertoires in HLA-sensitized kidney transplant candidates undergoing desensitization therapy

scientific article (publication date: 13 January 2017)

BAsE-Seq: a method for obtaining long viral haplotypes from short sequence reads

scientific article

BMET-15TUMOR CELL FREE DNA IN CEREBRAL SPINAL FLUID REFLECTS TREATMENT RESPONSE IN LEPTOMENINGEAL METASTASIS.

scientific article

Behavior of complex knots in single DNA molecules

scientific article published in Physical Review Letters

Biocompatibility and reduced drug absorption of sol-gel-treated poly(dimethyl siloxane) for microfluidic cell culture applications

scientific article

Brain Endothelial Cells Are Exquisite Sensors of Age-Related Circulatory Cues

scientific article published on 01 March 2020

Brain tumor mutations detected in cerebral spinal fluid

scientific article published on 20 January 2015

Broadly neutralizing human antibodies against dengue virus identified by single B cell transcriptomics

scientific article published on 10 December 2019

Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing

scientific article

Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators

scientific article published on 16 January 2020

Cellular Taxonomy of the Mouse Striatum as Revealed by Single-Cell RNA-Seq

scientific article

Cerebellar nuclei evolved by repeatedly duplicating a conserved cell-type set

scientific article published on 01 December 2020

Circulating cell-free DNA enables noninvasive diagnosis of heart transplant rejection.

scientific article

Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing

scientific article published in November 2017

Clinical assessment incorporating a personal genome

scientific article

Clonal Deletion Prunes but Does Not Eliminate Self-Specific αβ CD8(+) T Lymphocytes

scientific article published on May 2015

Clonal evolution of preleukemic hematopoietic stem cells precedes human acute myeloid leukemia.

scientific article

Cloning antibodies from single cells in pooled sequence libraries by selective PCR

scientific article published on 05 August 2020

Colloidal lenses allow high-temperature single-molecule imaging and improve fluorophore photostability

scientific article

Community Corner: Opening the Pandora's box of prenatal genetic testing ⬇️

scientific article published on 01 March 2011

Complex mammalian-like haematopoietic system found in a colonial chordate

scientific article published on 05 December 2018

Continuous and Discrete Neuron Types of the Adult Murine Striatum

scientific article published on 05 December 2019

Converting Adult Pancreatic Islet α Cells into β Cells by Targeting Both Dnmt1 and Arx.

scientific article published on 12 February 2017

Correction: Digital PCR provides sensitive and absolute calibration for high throughput sequencing

scientific article published on 19 November 2009

Correction: Lineage tracing of human B cells reveals the in vivo landscape of human antibody class switching

scientific article published on 9 November 2016

Correlation of gene expression and genome mutation in single B-cells

scientific article

Crystal structure of a hyperactive Escherichia coli glycerol kinase mutant Gly230 --> Asp obtained using microfluidic crystallization devices

scientific article

DNA sequencing: clinical applications of new DNA sequencing technologies.

scientific article

De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis

scientific article

Detection of aneuploidy with digital polymerase chain reaction

scientific article published on 24 August 2007

Detection of early stage pancreatic cancer using 5-hydroxymethylcytosine signatures in circulating cell free DNA

scientific article published on 19 October 2020

Determinism and stochasticity during maturation of the zebrafish antibody repertoire

scientific article

Developing optofluidic technology through the fusion of microfluidics and optics

scientific article

Developmental Heterogeneity of Microglia and Brain Myeloid Cells Revealed by Deep Single-Cell RNA Sequencing

scientific article published on 31 December 2018

Developmental cell death programs license cytotoxic cells to eliminate histocompatible partners

scientific article published on 23 May 2016

Differential Impacts on Host Transcription by ROP and GRA Effectors from the Intracellular Parasite Toxoplasma gondii

scientific article published on 09 June 2020

Differential encoding in prefrontal cortex projection neuron classes across cognitive tasks

scientific article published on 11 December 2020

Digital MDA for enumeration of total nucleic acid contamination

scientific article

Digital PCR provides absolute quantitation of viral load for an occult RNA virus ⬇️

scientific article published on September 29, 2011

Digital PCR provides sensitive and absolute calibration for high throughput sequencing

scientific article

Digital signaling decouples activation probability and population heterogeneity.

scientific article

Discovery of a hepatitis C target and its pharmacological inhibitors by microfluidic affinity analysis

scientific article

Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth

scientific article

Dissecting direct reprogramming from fibroblast to neuron using single-cell RNA-seq

scientific article published on 08 June 2016

Dissecting genomic diversity, one cell at a time

scientific article

Dissecting noncoding and pathogen RNA-protein interactomes

scientific article

Dissecting the clonal origins of childhood acute lymphoblastic leukemia by single-cell genomics

scientific article

Diverse homeostatic and immunomodulatory roles of immune cells in the developing mouse lung at single cell resolution

scientific article published on 02 June 2020

Donor-derived cell-free DNA predicts allograft failure and mortality after lung transplantation

scientific article published on 26 January 2019

Dynamic Pattern Formation in a Vesicle-Generating Microfluidic Device

scientific article

Dynamic chromatin localization of Sirt6 shapes stress- and aging-related transcriptional networks.

scientific article

Dynamics of the human antibody repertoire after B cell depletion in systemic sclerosis.

scientific article

Early prediction of preeclampsia in pregnancy with cell-free RNA

scientific article published on 09 February 2022

Early somatic mosaicism is a rare cause of long-QT syndrome

scientific article published on 28 September 2016

Effects of Selective Exclusion of Patients on Preterm Birth Test Performance

scientific article published on 01 May 2020

Effects of a modified dye-labeled nucleotide spacer arm on incorporation by thermophilic DNA polymerases

scientific article published in January 2006

Enabling Technologies for Personalized and Precision Medicine

scientific article published on 21 January 2020

Enhanced signals and fast nucleic acid hybridization by microfluidic chaotic mixing

scientific article published on May 2006

Erratum: Dissecting genomic diversity, one cell at a time

scholarly article published in Nature Methods

Experimental determination of the evolvability of a transcription factor

scientific article

Experimentally validated quantitative linear model for the device physics of elastomeric microfluidic valves

scientific article published in January 2007

Fluorescence near-field microscopy of DNA at sub-10 nm resolution

scientific article published on 27 December 2006

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

scientific article published on 4 March 2022

Food allergen detection by mass spectrometry: the role of systems biology

scientific article

Gene expression analysis with universal n-mer arrays

scientific article

Genetic measurement of memory B-cell recall using antibody repertoire sequencing

scientific article

Genome of a low-salinity ammonia-oxidizing archaeon determined by single-cell and metagenomic analysis

scientific article

Genome-wide Single-Cell Analysis of Recombination Activity and De Novo Mutation Rates in Human Sperm ⬇️

scientific article published on July 20, 2012

Genomic analysis at the single-cell level

scientific article

Gut cytokines modulate olfaction through metabolic reprogramming of glia

scientific article published on 21 July 2021

Heterogeneous T cell motility behaviors emerge from a coupling between speed and turning in vivo

scientific article published on 19 May 2020

High Temporal Resolution Detection of Patient-Specific Glucose Uptake from Human ex Vivo Adipose Tissue On-Chip

scientific article published on 25 June 2015

High fidelity hypothermic preservation of primary tissues in organ transplant preservative for single cell transcriptome analysis

scientific article published on 13 February 2018

High throughput automated chromatin immunoprecipitation as a platform for drug screening and antibody validation.

scientific article published on 8 May 2012

High-Performance Binary Protein Interaction Screening in a Microfluidic Format ⬇️

scientific article published on October 23, 2012

High-affinity allergen-specific human antibodies cloned from single IgE B cell transcriptomes

scientific article published in Science

High-throughput full-length single-cell mRNA-seq of rare cells

scientific article published on 29 November 2017

High-throughput multi-antigen microfluidic fluorescence immunoassays

scientific article

High-throughput sequencing of the zebrafish antibody repertoire

scientific article

High-throughput single-molecule optofluidic analysis

scientific article

Highly parallel measurements of interaction kinetic constants with a microfabricated optomechanical device

scientific article published on 21 August 2009

Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells.

scientific article published on August 2017

Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens

Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens

scientific article published on 27 February 2019

Identification and confirmation of a module of coexpressed genes

scientific article

Identification of a cKit(+) colonic crypt base secretory cell that supports Lgr5(+) stem cells in mice

scientific article published on 11 February 2012

Identification of a colonial chordate histocompatibility gene

scientific article

Identifying deer antler uhrf1 proliferation and s100a10 mineralization genes using comparative RNA-seq

article

In vitro embryo culture in defined, sub-microliter volumes

scientific article

Inhibiting USP16 rescues stem cell aging and memory in an Alzheimer’s model

scientific article published on 21 March 2022

Integrated nanoliter systems

scientific article published on October 2003

Investigating Pregnancy and Its Complications Using Circulating Cell-Free RNA in Women's Blood During Gestation

scientific article published on 14 December 2020

KIT Signaling Promotes Growth of Colon Xenograft Tumors in Mice and Is Up-Regulated in a Subset of Human Colon Cancers

scientific article published on 27 May 2015

LEFTY1 Is a Dual-SMAD Inhibitor that Promotes Mammary Progenitor Growth and Tumorigenesis

scientific article published on 14 July 2020

Lineage structure of the human antibody repertoire in response to influenza vaccination

scientific article published on February 2013

Lineage tracing of human B cells reveals the in vivo landscape of human antibody class switching

scientific article published on 02 August 2016

Linkage disequilibrium and signatures of positive selection around LINE-1 retrotransposons in the human genome.

scientific article

Lola regulates Drosophila olfactory projection neuron identity and targeting specificity.

scientific article

Long-term microfluidic tracking of coccoid cyanobacterial cells reveals robust control of division timing

scientific article

Long-term monitoring of bacteria undergoing programmed population control in a microchemostat

scientific article published in July 2005

Mapping of protein-protein interactions of E. coli RNA polymerase with microfluidic mechanical trapping

scientific article

Matrix-corrected mass spectrometry enables sensitive detection of food allergens and reveals widespread soy contamination of processed foods

Memory B Cell Activation, Broad Anti-influenza Antibodies, and Bystander Activation Revealed by Single-Cell Transcriptomics

scientific article published on 01 January 2020

Microfabricated fountain pens for high-density DNA arrays.

scientific article published on 15 September 2003

Microfluidic Memory and Control Devices ⬇️

scientific article published on May 9, 2003

Microfluidic device reads up to four consecutive base pairs in DNA sequencing-by-synthesis

scientific article

Microfluidic digital PCR enables multigene analysis of individual environmental bacteria

scientific article

Microfluidic digital PCR enables rapid prenatal diagnosis of fetal aneuploidy

scientific article

Microfluidic large-scale integration

scientific article published on 26 September 2002

Microfluidic large-scale integration: the evolution of design rules for biological automation

scientific article

Microfluidic serial digital to analog pressure converter for arbitrary pressure generation and contamination-free flow control

scientific article

Microfluidic single-cell mRNA isolation and analysis

scientific article published on May 2006

Microfluidic single-cell real-time PCR for comparative analysis of gene expression patterns

scientific article published on 5 April 2012

Microfluidic very large scale integration (mVLSI) with integrated micromechanical valves

scientific article published on 19 June 2012

Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples

scientific article

Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples

Microfluidics Technologies for Low Cell Number Chromatin Immunoprecipitation

scientific article published on 23 December 2015

Microfluidics in structural biology: smaller, faster… better ⬇️

scientific article published on October 1, 2003

Microfluidics: Fluid physics at the nanoliter scale

scientific article

Microtechnology in the clinical laboratory: will it solve analytical problems, and when will it make an impact?

scientific article published on 18 February 2010

Migration of cells in a social context

scientific article published on 18 December 2012

Mini-Metagenomics and Nucleotide Composition Aid the Identification and Host Association of Novel Bacteriophage Sequences

scientific article published on 16 August 2019

Modeling Spatial Correlation of Transcripts with Application to Developing Pancreas

scientific article published on 03 April 2019

Molecular and genetic regulation of pig pancreatic islet cell development

scientific article published on 30 March 2020

Molecular-level analysis of the serum antibody repertoire in young adults before and after seasonal influenza vaccination

scientific article

Monitoring pharmacologically induced immunosuppression by immune repertoire sequencing to detect acute allograft rejection in heart transplant patients: a proof-of-concept diagnostic accuracy study

scientific article

Multiomic immune clockworks of pregnancy

scientific article published on 04 February 2020

Multiomics Characterization of Preterm Birth in Low- and Middle-Income Countries

scientific article published on 01 December 2020

Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy

Multiplexed analysis of protein-ligand interactions by fluorescence anisotropy in a microfluidic platform

scientific article published on 25 September 2014

Multiplexed locus-specific analysis of DNA methylation in single cells.

scientific article published on 26 March 2015

Multistep synthesis of a radiolabeled imaging probe using integrated microfluidics

scientific article published in December 2005

Nanoliter reactors improve multiple displacement amplification of genomes from single cells

scientific article

Neutral and selective dynamics in a synthetic microbial community

article published in the Proceedings of the National Academy of Sciences of the United States of America

Non-invasive characterization of human bone marrow by cell free messenger-RNA reveals response to growth factor stimulation and hematopoietic reconstitution after transplantation: Supplemental figures and figure legends

Non-invasive characterization of human bone marrow stimulation and reconstitution by cell-free messenger RNA sequencing

scientific article published on 21 January 2020

Non-invasive prenatal measurement of the fetal genome

scientific article

Noninvasive Prenatal Diagnosis of Single-Gene Disorders by Use of Droplet Digital PCR.

scientific article published on 2 November 2017

Noninvasive blood tests for fetal development predict gestational age and preterm delivery

scientific article published in Science

Noninvasive characterization of Alzheimer's disease by circulating, cell-free messenger RNA next-generation sequencing

scientific article published on 09 December 2020

Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood

scientific article

Noninvasive in vivo monitoring of tissue-specific global gene expression in humans

scientific article

Noninvasive monitoring of infection and rejection after lung transplantation

scientific article

Noninvasive prenatal diagnosis in a fetus at risk for methylmalonic acidemia

scientific article

Northstar enables automatic classification of known and novel cell types from tumor samples

scientific article published on 17 September 2020

Novel exons and splice variants in the human antibody heavy chain identified by single cell and single molecule sequencing

scientific article published on 22 January 2015

Nucleic acid cleavage with a hyperthermophilic Cas9 from an uncultured Ignavibacterium

scientific article published on 28 October 2019

Number, density, and surface/cytoplasmic distribution of GABA transporters at presynaptic structures of knock-in mice carrying GABA transporter subtype 1-green fluorescent protein fusions.

scientific article published on December 2002

Numerous uncharacterized and highly divergent microbes which colonize humans are revealed by circulating cell-free DNA.

scientific article

Optofluidic cell selection from complex microbial communities for single-genome analysis

scientific article

Ostwald ripening of clusters during protein crystallization

scientific article published on 26 April 2010

Parallel picoliter rt-PCR assays using microfluidics

scientific article

Partial genome assembly for a candidate division OP11 single cell from an anoxic spring (Zodletone Spring, Oklahoma).

scientific article published on 9 September 2011

Patch-Seq Links Single-Cell Transcriptomes to Human Islet Dysfunction in Diabetes

scientific article published on 13 April 2020

Persistent transcriptional programmes are associated with remote memory

scientific article published on 11 November 2020

Phase knowledge enables rational screens for protein crystallization.

scientific article

Phylogenetic analysis of the human antibody repertoire reveals quantitative signatures of immune senescence and aging

scientific article published on 17 January 2017

Physiological blood-brain transport is impaired with age by a shift in transcytosis

scientific article published on 01 July 2020

Polyelectrolyte surface interface for single-molecule fluorescence studies of DNA polymerase

scientific article published on 01 March 2003

Proteome-wide protein interaction measurements of bacterial proteins of unknown function

scientific article

Quantifying double-strand breaks and clustered damages in DNA by single-molecule laser fluorescence sizing

scientific article

Quantitative Analysis of Synthetic Cell Lineage Tracing Using Nuclease Barcoding

scientific article published on 6 March 2017

Quantitative analysis of the human airway microbial ecology reveals a pervasive signature for cystic fibrosis

scientific article published on September 2012

Quantitative assessment of single-cell RNA-sequencing methods.

scientific article

RNA-guided endonuclease provides a therapeutic strategy to cure latent herpesviridae infection

scientific article

Rapid Chromatin Switch in the Direct Reprogramming of Fibroblasts to Neurons

scientific article published on September 2017

Read count-based method for high-throughput allelic genotyping of transposable elements and structural variants

scientific article published on 8 July 2015

Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq

scientific article

Risky Business: Meeting the Structural Needs of Transdisciplinary Science

scientific article published in December 2017

Role of epithelial to mesenchymal transition associated genes in mammary gland regeneration and breast tumorigenesis

scientific article published on 21 November 2017

Sanativo Wound Healing Product Does Not Accelerate Reepithelialization in a Mouse Cutaneous Wound Healing Model.

scientific article published in February 2017

Scaling properties of a low-actuation pressure microfluidic valve

article

Self-assembling manifolds in single-cell RNA sequencing data

scientific article published on 16 September 2019

Senescent cells promote tissue NAD+ decline during ageing via the activation of CD38+ macrophages

scientific article published on 16 November 2020

Sensitivity of noninvasive prenatal detection of fetal aneuploidy from maternal plasma using shotgun sequencing is limited only by counting statistics

scientific article (publication date: 3 May 2010)

Sequence information can be obtained from single DNA molecules

scientific article

Signatures of selection in the human antibody repertoire: Selective sweeps, competing subclones, and neutral drift

article published in the Proceedings of the National Academy of Sciences of the United States of America

Significance and statistical errors in the analysis of DNA microarray data

scientific article

Simultaneous measurement of amyloid fibril formation by dynamic light scattering and fluorescence reveals complex aggregation kinetics

scientific article

Simultaneous single-molecule epigenetic imaging of DNA methylation and hydroxymethylation

scientific article published on 28 March 2016

Simultaneously Monitoring Immune Response and Microbial Infections During Pregnancy through Plasma cfRNA Sequencing.

scientific article published on 13 September 2017

Single Cell Restriction Enzyme-Based Analysis of Methylation at Genomic Imprinted Regions in Preimplantation Mouse Embryos

scientific article published in January 2017

Single Cell Transcriptomes Derived from Human Cervical and Uterine Tissue during Pregnancy

scientific article published on 15 May 2019

Single cell analysis of human foetal liver captures the transcriptional profile of hepatobiliary hybrid progenitors

scientific article published on 26 July 2019

Single cell profiling of circulating tumor cells: transcriptional heterogeneity and diversity from breast cancer cell lines

scientific article

Single molecule measurement of the "speed limit" of DNA polymerase

scientific article

Single-Cell Analysis of Human Pancreas Reveals Transcriptional Signatures of Aging and Somatic Mutation Patterns

scientific article published on 27 September 2017

Single-Cell RNA-Seq Analysis of Infiltrating Neoplastic Cells at the Migrating Front of Human Glioblastoma.

scientific article published on October 2017

Single-Cell RNAseq analysis of infiltrating neoplastic cells at the migrating front of human glioblastoma

scholarly article published 19 July 2017

Single-Cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting

scientific article published on 03 February 2020

Single-Cell-Genomics-Facilitated Read Binning of Candidate Phylum EM19 Genomes from Geothermal Spring Metagenomes

scientific article published on 4 December 2015

Single-cell DNA-methylation analysis reveals epigenetic chimerism in preimplantation embryos

scientific article

Single-cell NF-kappaB dynamics reveal digital activation and analogue information processing.

scientific article published on 27 June 2010

Single-cell RNA sequencing of SARS-CoV-2 cell entry factors in the preconceptional human endometrium

scientific article published on 01 September 2021

Single-cell RNA sequencing reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress.

scientific article published on 14 December 2017

Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons

scientific article published on 16 August 2016

Single-cell analysis of Schistosoma mansoni identifies a conserved genetic program controlling germline stem cell fate

scientific article published on 20 January 2021

Single-cell analysis of early progenitor cells that build coronary arteries

scientific article published in Nature

Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage

scientific article published on January 2013

Single-cell dissection of transcriptional heterogeneity in human colon tumors

scientific article

Single-cell genome sequencing: current state of the science

scientific article

Single-cell genomics

scientific article published on 01 April 2011

Single-cell multimodal profiling reveals cellular epigenetic heterogeneity.

scientific article published on 15 August 2016

Single-cell sequencing provides clues about the host interactions of segmented filamentous bacteria (SFB).

scientific article

Single-cell transcriptional dynamics of flavivirus infection.

scientific article published on 16 February 2018

Single-cell transcriptomes and whole-brain projections of serotonin neurons in the mouse dorsal and median raphe nuclei

scientific article published on 24 October 2019

Single-cell transcriptomes of developing and adult olfactory receptor neurons in

Single-cell transcriptomic atlas of the human endometrium during the menstrual cycle

scientific article published on 14 September 2020

Single-molecule DNA sequencing of a viral genome

scientific article

Single-molecule sequencing of an individual human genome

scientific article

Single-nucleotide-resolution sequencing of human N6-methyldeoxyadenosine reveals strand-asymmetric clusters associated with SSBP1 on the mitochondrial genome

scientific article published in December 2018

Sizing Up Cell-Free DNA ⬇️

scientific article published on January 10, 2012

Solvent resistant microfluidic DNA synthesizer

scientific article

Solvent-resistant photocurable liquid fluoropolymers for microfluidic device fabrication [corrected].

scientific article published in March 2004

Solving the "world-to-chip" interface problem with a microfluidic matrix

scientific article published in September 2003

Surgical and molecular characterization of primary and metastatic disease in a neuroendocrine tumor arising in a tailgut cyst

scientific article published on 01 October 2018

Systematic investigation of protein phase behavior with a microfluidic formulator

scientific article

Systematic reconstruction of RNA functional motifs with high-throughput microfluidics

scientific article

T cell receptor sequencing of early-stage breast cancer tumors identifies altered clonal structure of the T cell repertoire

scientific article published on 14 November 2017

Taxonomic and functional diversity provides insight into microbial pathways and stress responses in the saline Qinghai Lake, China

scientific article

Temporal response of the human virome to immunosuppression and antiviral therapy

scientific article

The Human Cell Atlas

scientific article

The Human Cell Atlas

The RootChip: an integrated microfluidic chip for plant science

scientific article published on 20 December 2011

The genome sequence of the colonial chordate, Botryllus schlosseri

scientific article published in 2013

The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line

scientific article

The phylogenetic and geographic structure of Y-chromosome haplogroup R1a

scientific article

The promise and challenge of high-throughput sequencing of the antibody repertoire.

scientific article

The transcriptional landscape of Venezuelan equine encephalitis virus (TC-83) infection

scientific article published on 31 March 2021

Time-lapse fluorescence imaging of Arabidopsis root growth with rapid manipulation of the root environment using the RootChip

scientific article

Tip-enhanced fluorescence microscopy at 10 nanometer resolution

scientific article published on 28 October 2004

Tools for the Microbiome: Nano and Beyond

scientific article published on 22 December 2015

Towards personalized medicine in maternal and child health: integrating biologic and social determinants

scientific article published on 26 May 2020

Tracking single hematopoietic stem cells in vivo using high-throughput sequencing in conjunction with viral genetic barcoding ⬇️

scientific article published on October 2, 2011

Transcription factor profiling in individual hematopoietic progenitors by digital RT-PCR

scholarly article

Transcriptional instability is not a universal attribute of aging.

scientific article published on 8 October 2007

Transcriptomic Profiling Maps Anatomically Patterned Subpopulations among Single Embryonic Cardiac Cells

scientific article

Tumor DNA in cerebral spinal fluid reflects clinical course in a patient with melanoma leptomeningeal brain metastases.

scientific article published on 9 March 2016

Understanding health disparities

article

Universal noninvasive detection of solid organ transplant rejection

scientific article

Variability in G-protein-coupled signaling studied with microfluidic devices.

scientific article

Velocity-independent microfluidic flow cytometry

scientific article published on August 2002

Versatile, fully automated, microfluidic cell culture system

scientific article

Viral taxonomy derived from evolutionary genome relationships

scientific article published on 14 August 2019

Virus-inclusive single-cell RNA sequencing reveals the molecular signature of progression to severe dengue

article published in the Proceedings of the National Academy of Sciences of the United States of America

Voices of biotech

scientific article published on March 2016

Whole-genome molecular haplotyping of single cells

scientific article

c-Jun overexpression in CAR T cells induces exhaustion resistance

scientific article published on 04 December 2019

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