List of works - Martha Clokie

'Get in Early'; Biofilm and Wax Moth (Galleria mellonella) Models Reveal New Insights into the Therapeutic Potential of Clostridium difficile Bacteriophages

scientific article

A Taxonomic Review of Clostridium difficile Phages and Proposal of a Novel Genus, "Phimmp04likevirus".

scientific article published on 21 May 2015

A proteomic approach to the identification of the major virion structural proteins of the marine cyanomyovirus S-PM2.

scientific article published in June 2008

Abundant and diverse clustered regularly interspaced short palindromic repeat spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen

scientific article

An antisense RNA in a lytic cyanophage links psbA to a gene encoding a homing endonuclease

scientific article

Analyses of the Distribution Patterns of Burkholderia pseudomallei and Associated Phages in Soil Samples in Thailand Suggest That Phage Presence Reduces the Frequency of Bacterial Isolation

scientific article

Assessing Illumina technology for the high-throughput sequencing of bacteriophage genomes

scientific article

Bacteriophage Combinations Significantly Reduce Clostridium difficile Growth In Vitro and Proliferation In Vivo

scientific article published on 7 December 2015

Bacteriophages are more virulent to bacteria with human cells than they are in bacterial culture; insights from HT-29 cells

scientific article published on 23 March 2018

Biogeochemistry and biodiversity in a network of saline–alkaline lakes: Implications of ecohydrological connectivity in the Kenyan Rift Valley

article

CIM(®) monolithic anion-exchange chromatography as a useful alternative to CsCl gradient purification of bacteriophage particles

scientific article

Clostridium difficile phages: still difficult?

scientific article published in 2014

Cyanophage infection and photoinhibition in marine cyanobacteria

scientific article

Discovery of cyanophage genomes which contain mitochondrial DNA polymerase

scientific article published on 18 February 2011

Diverse temperate bacteriophage carriage in Clostridium difficile 027 strains ⬇️

scientific article

Draft Genome Sequences of Three Novel Clostridium Isolates from Northern Iraq

scientific article published on 25 February 2016

Effects of grazing and cultivation on forest plant communities in Mount Elgon National Park, Uganda

article

Efficacy of an Optimised Bacteriophage Cocktail to Clear Clostridium difficile in a Batch Fermentation Model

scientific article published on 13 February 2018

Evidence for the intense exchange of MazG in marine cyanophages by horizontal gene transfer

scientific article

Finding a needle in the virus metagenome haystack--micro-metagenome analysis captures a snapshot of the diversity of a bacteriophage armoire

scientific article

Genetic organization of the psbAD region in phages infecting marine Synechococcus strains

scientific article

Genetically Diverse Clostridium difficile Strains Harboring Abundant Prophages in an Estuarine Environment

scientific article published in April 2014

Genetically diverse Clostridium difficile strains harboring abundant prophages in an estuarine environment

scientific article published on 02 August 2013

Genomic and proteomic characterization of two novel siphovirus infecting the sedentary facultative epibiont cyanobacterium Acaryochloris marina

scientific article

Infection by the 'photosynthetic' phage S-PM2 induces increased synthesis of phycoerythrin in Synechococcus sp. WH7803.

scientific article published in June 2008

Isolation and characterization of a novel podovirus which infects burkholderia pseudomallei

scientific article

Light-dependent adsorption of photosynthetic cyanophages to Synechococcus sp. WH7803.

scientific article

Marine cyanophages and light

scientific article published in December 2006

Marine ecosystems: bacterial photosynthesis genes in a virus

scientific article

Methods in molecular biology. Introduction.

scientific article published in January 2009

On the difficulties of isolating Clostridium difficile from hospital environments

scientific article published on 3 May 2013

PCR and partial sequencing of bacteriophage genomes

scientific article

Photosynthetic genes in viral populations with a large genomic size range from Norwegian coastal waters

scientific article published on 12 November 2007

Pigment composition and adaptation in free-living and symbiotic strains of Acaryochloris marina

scientific article

Prophage carriage and diversity within clinically relevant strains of Clostridium difficile

scientific article

Quantification of host and phage mRNA expression during infection using real-time PCR.

scientific article published in January 2009

Recovery of viable cyanophages from the sediments of a eutrophic lake at decadal timescales

scientific article

Review of the nature, diversity and structure of bacteriophage receptor binding proteins that target Gram-positive bacteria

scientific article published on 3 January 2018

T4 genes in the marine ecosystem: studies of the T4-like cyanophages and their role in marine ecology

scientific article published on 28 October 2010

Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.

scientific article published on 22 January 2018

Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee

scientific article published on 11 March 2020

Temperature dependent bacteriophages of a tropical bacterial pathogen

scientific article

Temperature-dependent virus lifecycle choices may reveal and predict facets of the biology of opportunistic pathogenic bacteria.

scientific article

The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains

scientific article

Transcription of a 'photosynthetic' T4-type phage during infection of a marine cyanobacterium

scientific article

Two Novel Myoviruses from the North of Iraq Reveal Insights into Clostridium difficile Phage Diversity and Biology

scientific article

Unravelling the Links between Phage Adsorption and Successful Infection in Clostridium difficile

scholarly article by Anisha Mahendra Thanki published in August 2018

What does the talking?: quorum sensing signalling genes discovered in a bacteriophage genome

scientific article published on 24 January 2014

List of works by Martha Clokie

'Get in Early'; Biofilm and Wax Moth (Galleria mellonella) Models Reveal New Insights into the Therapeutic Potential of Clostridium difficile Bacteriophages

A Taxonomic Review of Clostridium difficile Phages and Proposal of a Novel Genus, "Phimmp04likevirus".

A proteomic approach to the identification of the major virion structural proteins of the marine cyanomyovirus S-PM2.

Abundant and diverse clustered regularly interspaced short palindromic repeat spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen

An antisense RNA in a lytic cyanophage links psbA to a gene encoding a homing endonuclease

Analyses of the Distribution Patterns of Burkholderia pseudomallei and Associated Phages in Soil Samples in Thailand Suggest That Phage Presence Reduces the Frequency of Bacterial Isolation

Assessing Illumina technology for the high-throughput sequencing of bacteriophage genomes

Bacteriophage Combinations Significantly Reduce Clostridium difficile Growth In Vitro and Proliferation In Vivo

Bacteriophages are more virulent to bacteria with human cells than they are in bacterial culture; insights from HT-29 cells

Biogeochemistry and biodiversity in a network of saline–alkaline lakes: Implications of ecohydrological connectivity in the Kenyan Rift Valley

CIM(®) monolithic anion-exchange chromatography as a useful alternative to CsCl gradient purification of bacteriophage particles

Clostridium difficile phages: still difficult?

Cyanophage infection and photoinhibition in marine cyanobacteria

Discovery of cyanophage genomes which contain mitochondrial DNA polymerase

Diverse temperate bacteriophage carriage in Clostridium difficile 027 strains ⬇️

Draft Genome Sequences of Three Novel Clostridium Isolates from Northern Iraq

Effects of grazing and cultivation on forest plant communities in Mount Elgon National Park, Uganda

Efficacy of an Optimised Bacteriophage Cocktail to Clear Clostridium difficile in a Batch Fermentation Model

Evidence for the intense exchange of MazG in marine cyanophages by horizontal gene transfer

Finding a needle in the virus metagenome haystack--micro-metagenome analysis captures a snapshot of the diversity of a bacteriophage armoire

Genetic organization of the psbAD region in phages infecting marine Synechococcus strains

Genetically Diverse Clostridium difficile Strains Harboring Abundant Prophages in an Estuarine Environment

Genetically diverse Clostridium difficile strains harboring abundant prophages in an estuarine environment

Genomic and proteomic characterization of two novel siphovirus infecting the sedentary facultative epibiont cyanobacterium Acaryochloris marina

Infection by the 'photosynthetic' phage S-PM2 induces increased synthesis of phycoerythrin in Synechococcus sp. WH7803.

Isolation and characterization of a novel podovirus which infects burkholderia pseudomallei

Light-dependent adsorption of photosynthetic cyanophages to Synechococcus sp. WH7803.

Marine cyanophages and light

Marine ecosystems: bacterial photosynthesis genes in a virus

Methods in molecular biology. Introduction.

On the difficulties of isolating Clostridium difficile from hospital environments

PCR and partial sequencing of bacteriophage genomes

Photosynthetic genes in viral populations with a large genomic size range from Norwegian coastal waters

Pigment composition and adaptation in free-living and symbiotic strains of Acaryochloris marina

Prophage carriage and diversity within clinically relevant strains of Clostridium difficile

Quantification of host and phage mRNA expression during infection using real-time PCR.

Recovery of viable cyanophages from the sediments of a eutrophic lake at decadal timescales

Review of the nature, diversity and structure of bacteriophage receptor binding proteins that target Gram-positive bacteria

T4 genes in the marine ecosystem: studies of the T4-like cyanophages and their role in marine ecology

Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.

Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee

Temperature dependent bacteriophages of a tropical bacterial pathogen

Temperature-dependent virus lifecycle choices may reveal and predict facets of the biology of opportunistic pathogenic bacteria.

The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains

Transcription of a 'photosynthetic' T4-type phage during infection of a marine cyanobacterium

Two Novel Myoviruses from the North of Iraq Reveal Insights into Clostridium difficile Phage Diversity and Biology

Unravelling the Links between Phage Adsorption and Successful Infection in Clostridium difficile

What does the talking?: quorum sensing signalling genes discovered in a bacteriophage genome