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List of works by Scott E. Fraser

3D in vivo imaging with extended-focus optical coherence microscopy

scientific article published on 18 April 2017

A Calcium-Sensitive Magnetic Resonance Imaging Contrast Agent

scientific article published in 1999

A detailed description of an economical setup for electroporation of chick embryos in ovo.

scientific article published on 18 September 2013

A differential adhesion approach to the patterning of nerve connections

scientific article published on 01 October 1980

A model for MRI contrast enhancement using T1 agents.

scientific article

A transgenic quail model that enables dynamic imaging of amniote embryogenesis

scientific article

A uniplanar three-axis gradient set for in vivo magnetic resonance microscopy

scientific article

A versatile gene trap to visualize and interrogate the function of the vertebrate proteome.

scientific article published on November 2011

A versatile, multi-laser twin-microscope system for light-sheet imaging

scientific article published on 01 May 2020

Abundance of gap junctions at glutamatergic mixed synapses in adult Mosquitofish spinal cord neurons

scientific article

Adhesive Interactions and the Patterning of Nerve Connections: An Experimental and Theoretical Approach

scientific article published in 1987

Airway branching has conserved needs for local parasympathetic innervation but not neurotransmission.

scientific article

An E3-ligase-based method for ablating inhibitory synapses

scientific article

An all-optical approach for probing microscopic flows in living embryos

scientific article

Analysis of somitogenesis using multiphoton laser scanning microscopy (MPLSM)

Axon fasciculation and differences in midline kinetics between pioneer and follower axons within commissural fascicles

scientific article published in October 2003

BDNF in the development of the visual system of Xenopus.

scientific article published in April 1994

Biological microscopy: the emergence of digital microscopy.

scientific article

Biological systems from an engineer's point of view

scientific article

Biotagging of Specific Cell Populations in Zebrafish Reveals Gene Regulatory Logic Encoded in the Nuclear Transcriptome

scientific article published on April 2017

Building enhancers from the ground up: a synthetic biology approach

scientific article published on July 2011

Cell dynamics during somite boundary formation revealed by time-lapse analysis

scientific article

Cell lineage analysis reveals multipotent precursors in the ciliary margin of the frog retina.

scientific article

Cell lineages

scientific article published on 01 March 1997

Cell migration in the formation of the pronephric duct in Xenopus laevis

scientific article published on 01 December 1990

Chapter 3 Development, Maintenance, and Modulation of Patterned Membrane Topography: Models Based on the Acetylcholine Receptor

article

Characterization of Antibody Bipolar Bridging Mediated by the Human Cytomegalovirus Fc Receptor gp68

scientific article (publication date: 6 January 2016)

Characterization of high-Q optical microcavities using confocal microscopy

scientific article published in December 2008

Characterizing ontogeny of quantity discrimination in zebrafish

scientific article published in 2022

Circumferential strain in the wall of the common carotid artery: comparing displacement-encoded and cine MRI in volunteers

scientific article

Combinatorial analysis of mRNA expression patterns in mouse embryos using hybridization chain reaction

scientific article

Comparison of FcRn- and pIgR-mediated transport in MDCK cells by fluorescence confocal microscopy

scientific article

Conditional Creation and Rescue of Nipbl-Deficiency in Mice Reveals Multiple Determinants of Risk for Congenital Heart Defects

scientific article

Confocal quantification of cis-regulatory reporter gene expression in living sea urchin

scientific article published on 14 June 2006

Convergent extension: the molecular control of polarized cell movement during embryonic development

scientific article (publication date: June 2002)

Crystal gazing in optical microscopy ⬇️

scientific article published on November 1, 2003

Cytoskeletal polarity mediates localized induction of the heart progenitor lineage

scientific article published on 24 July 2011

Deep and fast live imaging with two-photon scanned light-sheet microscopy

scientific article

Detection of pigment epithelial detachment vascularization in age-related macular degeneration using phase-variance OCT angiography

scientific article published on 15 July 2015

Developmental potential of avian trunk neural crest cells in situ.

scientific article

Differences in protein mobility between pioneer versus follower growth cones

scholarly article

Differential intensity contrast swept source optical coherence tomography for human retinal vasculature visualization

scholarly article published 8 March 2012

Differential phase-contrast, swept-source optical coherence tomography at 1060 nm for in vivo human retinal and choroidal vasculature visualization

scientific article published in February 2012

Differentiation of the vertebrate neural tube.

scientific article published on December 1997

Digital three-dimensional atlas of quail development using high-resolution MRI.

scientific article published on 11 May 2007

Digitizing life at the level of the cell: high-performance laser-scanning microscopy and image analysis for in toto imaging of development

scientific article published on November 2003

Direct imaging of in vivo neuronal migration in the developing cerebellum ⬇️

scientific article published on November 27, 2001

Dishevelled controls cell polarity during Xenopus gastrulation

scientific article (publication date: 4 May 2000)

Dishevelled genes mediate a conserved mammalian PCP pathway to regulate convergent extension during neurulation

scientific journal article

Distinct modes of floor plate induction in the chick embryo

scientific article published on 13 August 2003

Double time-scale image reconstruction of the beating and developing embryonic zebrafish heart

Dynamic analyses of Drosophila gastrulation provide insights into collective cell migration

scientific article published on December 2008

Dynamic analysis of vascular morphogenesis using transgenic quail embryos

scientific article (publication date: 2010)

Dynamic aspects of retinotectal map formation revealed by a vital-dye fiber-tracing technique

scientific article published on 01 April 1986

Dynamic imaging of the growth plate cartilage reveals multiple contributors to skeletal morphogenesis

scientific article

Dynamic in vivo imaging of postimplantation mammalian embryos using whole embryo culture.

scientific article published in December 2002

Dynamic structure and protein expression of the live embryonic heart captured by 2-photon light sheet microscopy and retrospective registration

scientific article published on 11 May 2015

Early regulative ability of the neuroepithelium to form cardiac neural crest

scientific article published on November 2010

Editorial overview: New technologies

Efficient generation of transgenic mice by lentivirus-mediated modification of spermatozoa

scientific article published on 2 December 2013

Electrophoretic repatterning of charged cytoplasmic molecules within tissues coupled by gap junctions by externally applied electric fields.

scientific article

Electrophysiological characterization of Grueneberg ganglion olfactory neurons: spontaneous firing, sodium conductance, and hyperpolarization-activated currents.

scientific article published on 30 May 2012

Enhancer and gene traps for molecular imaging and genetic analysis in zebrafish

scientific article published on 08 April 2013

Epithelial cells of Hydra are dye-coupled

scientific article published in Nature

Errata: Three-dimensional real-time imaging of cardiac cell motions in living embryos

Extended volume retinal vascular imaging with phase variance contrast optical coherence tomography

FGF receptor signalling is required to maintain neural progenitors during Hensen's node progression.

scientific article published in June 2001

FGF signaling mediates regeneration of the differentiating cerebellum through repatterning of the anterior hindbrain and reinitiation of neuronal migration.

scientific article published in July 2006

FRET Measurements Using Multispectral Imaging

Fast fluorescence microscopy for imaging the dynamics of embryonic development

scientific article published on 13 May 2008

Fate map and morphogenesis of presumptive neural crest and dorsal neural tube

scientific article published on 28 March 2009

Fate maps of the zebrafish embryo ⬇️

scientific article published on August 1, 1995

Fiber optic mapping of the Xenopus visual system: shift in the retinotectal projection during development

scientific article published in February 1983

Fluorescent in situ hybridization employing the conventional NBT/BCIP chromogenic stain

scientific article (publication date: June 2007)

Fluorescently detectable magnetic resonance imaging agents.

scientific article

Formation and removal of alkylthiolate self-assembled monolayers on gold in aqueous solutions

scientific article published on 3 January 2006

Formation of the dorsal marginal zone in Xenopus laevis analyzed by time-lapse microscopic magnetic resonance imaging

scientific article published on 13 February 2007

Four-dimensional cardiac imaging in living embryos via postacquisition synchronization of nongated slice sequences

scientific article published in September 2005

Gap junctions and cell interactions during development

article

Gene transfer to the embryo: strategies for the delivery and expression of proteins at 48 to 56 hours postfertilization.

scientific article

Grueneberg ganglion olfactory subsystem employs a cGMP signaling pathway

scientific article

Heterogeneous Expression of Multiple Putative Patterning Genes by Single Cells from the Chick Hindbrain ⬇️

scientific article published on November 15, 1997

High sensitivity nanoparticle detection using optical microcavities

scientific article

High-contrast, synchronous volumetric imaging with selective volume illumination microscopy

scientific article published on 14 February 2020

High-speed multicolor microscopy of repeating dynamic processes

scientific article

Hyperspectral phasor analysis enables multiplexed 5D in vivo imaging

scientific article published on 9 January 2017

Imaging in systems biology

scientific article published on September 2007

Imaging of the cross-presenting dendritic cell subsets in the skin-draining lymph node

scientific article

Imaging the Cell and Molecular Dynamics of Craniofacial Development: Challenges and New Opportunities in Imaging Developmental Tissue Patterning

scientific article published on 19 October 2015

In ovo live imaging of avian embryos

scientific article

In vivo analysis of cell lineage in vertebrate neurogenesis

In vivo human choroidal vascular pattern visualization using high-speed swept-source optical coherence tomography at 1060 nm.

scientific article

In vivo human retinal and choroidal vasculature visualization using differential phase contrast swept source optical coherence tomography at 1060 nm

scholarly article published 9 February 2012

In vivo imaging of transplanted islets with 64Cu-DO3A-VS-Cys40-Exendin-4 by targeting GLP-1 receptor

scientific article published on 14 July 2011

In vivo volumetric imaging of human retinal circulation with phase-variance optical coherence tomography ⬇️

scientific article

Inhibition of nucleotide synthesis promotes replicative senescence of human mammary epithelial cells

scientific article published on 28 May 2019

Interactions of Eph-related receptors and ligands confer rostrocaudal pattern to trunk neural crest migration.

scientific article

Intercellular bridges in vertebrate gastrulation

scientific article (publication date: 2011)

Intracardiac fluid forces are an essential epigenetic factor for embryonic cardiogenesis

scientific article

Intracellular kinetics of the androgen receptor shown by multimodal Image Correlation Spectroscopy (mICS).

scientific article published on 03 March 2016

Intracellular transport dynamics of endosomes containing DNA polyplexes along the microtubule network

scientific article published on 6 January 2006

Intravital imaging of green fluorescent protein using two-photon laser-scanning microscopy.

scientific article published on January 1996

Label-Free, Single Molecule Microsensors

Label-free detection of chemical messenger proteins

Label-free detection of cytokines using optical microcavities

Label-free imaging of developing vasculature in zebrafish with phase variance optical coherence microscopy

Label-free single-molecule all-optical sensor

Label-free, single molecule detection of cytokines using optical microcavities

Label-free, single-molecule detection with optical microcavities

scientific article

Logarithmic intensity and speckle-based motion contrast methods for human retinal vasculature visualization using swept source optical coherence tomography

scientific article published on 10 February 2012

MR microscopy of transgenic mice that spontaneously acquire experimental allergic encephalomyelitis.

scientific article published in July 1998

Macrophage Epithelial Reprogramming Underlies Mycobacterial Granuloma Formation and Promotes Infection

scientific article

Magnetic resonance microscopy: recent advances and applications.

scientific article

Mapping a multiplexed zoo of mRNA expression

scientific article

Mapping of neural crest pathways in Xenopus laevis using inter- and intra-specific cell markers.

scientific article

Mapping transplanted stem cell migration after a stroke: a serial, in vivo magnetic resonance imaging study

scientific article published on January 2004

Mechanistic basis of otolith formation during teleost inner ear development

scientific article

Micro-MRI at 11.7 T of a murine brain tumor model using delayed contrast enhancement

scientific article published on July 2003

Mitofusins Mfn1 and Mfn2 coordinately regulate mitochondrial fusion and are essential for embryonic development

scientific journal article

Mobility and transverse flow visualization using phase variance contrast with spectral domain optical coherence tomography

article

Modeling a hox gene network in silico using a stochastic simulation algorithm

scientific article

Modulation of neuronal activity and plasma membrane properties with low-power millimeter waves in organotypic cortical slices

scientific article published on 19 July 2010

Motion-sensitive 3-D optical coherence microscope operating at 1300 nm for the visualization of early frog development

article

Mouse lemur microscopic MRI brain atlas.

scientific article

Multi-shaping technique reduces sidelobe magnitude in optical coherence tomography

scientific article published on 26 October 2017

Multidimensional quantitative analysis of mRNA expression within intact vertebrate embryos.

scientific article published on 8 January 2018

Multiphoton excitation spectra in biological samples

scientific article

Myelin deficiencies visualized in vivo: visually evoked potentials and T2-weighted magnetic resonance images of shiverer mutant and wild-type mice

scientific article published in December 2006

Nanobody-targeted E3-ubiquitin ligase complex degrades nuclear proteins

scientific article

Nanotools for neuroscience and brain activity mapping

scientific article published on 20 March 2013

Neural crest cell dynamics revealed by time-lapse video microscopy of whole embryo chick explant cultures.

scientific article published in December 1998

New syntheses for 11-(mercaptoundecyl)triethylene glycol and mercaptododecyltriethyleneoxy biotin amide

New tools for visualization and analysis of morphogenesis in spherical embryos.

scientific article

New transgenic reporters identify somatosensory neuron subtypes in larval zebrafish

scientific article published on 27 September 2012

Noninvasive imaging of the foveal avascular zone with high-speed, phase-variance optical coherence tomography

scientific article

Oct4 kinetics predict cell lineage patterning in the early mammalian embryo

scientific journal article

Oct4 kinetics predict cell lineage patterning in the early mammalian embryo

Optical coherence microscopy with extended focus for in vivo embryonic imaging

Optical imaging of the chorioretinal vasculature in the living human eye

scientific article

Pattern formation in the vertebrate nervous system ⬇️

scientific article published on August 1, 1991

Pattern regulation in the eyebud of Xenopus studied with a vital-dye fiber-tracing technique.

scientific article published in April 1986

Patterning of retinotectal connections in the vertebrate visual system.

scientific article

Patterns of dye coupling in the imaginal wing disk of Drosophila melanogaster

scientific article published in October 1985

PhOTO zebrafish: a transgenic resource for in vivo lineage tracing during development and regeneration

scientific article

Phase-contrast OCT imaging of transverse flows in the mouse retina and choroid

scientific article published on 19 June 2008

Phase-variance optical coherence tomography: a technique for noninvasive angiography

scientific article

Planar cell polarity signalling controls cell division orientation during zebrafish gastrulation

scientific article published on 14 July 2004

Pre-processing visualization of hyperspectral fluorescent data with Spectrally Encoded Enhanced Representations

scientific article published on 05 February 2020

Probing cilia-driven flow in living embryos using femtosecond laser ablation and fast imaging

Programmable in situ amplification for multiplexed imaging of mRNA expression

scientific article published on 31 October 2010

Quantitating intracellular transport of polyplexes by spatio-temporal image correlation spectroscopy

scientific article

Quantitative imaging of cis-regulatory reporters in living embryos

scientific article

Quantitative imaging of collective cell migration during Drosophila gastrulation: multiphoton microscopy and computational analysis

scientific article

Quantitative imaging of the collective cell movements shaping an embryo

Quantum dots are powerful multipurpose vital labeling agents in zebrafish embryos

scientific article published in November 2005

Rapid remodeling of retinal arbors in the tectum with and without blockade of synaptic transmission.

scientific article published on April 1994

Rapid three-dimensional imaging and analysis of the beating embryonic heart reveals functional changes during development

scientific article published in November 2006

Receptor-targeted co-transport of DNA and magnetic resonance contrast agents.

scientific article

Regional requirements for Dishevelled signaling during Xenopus gastrulation: separable effects on blastopore closure, mesendoderm internalization and archenteron formation.

scientific article

Related Methods for Three-Dimensional Imaging

Resolution degradation due to brain tissue scattering

Resolution of multiple green fluorescent protein color variants and dyes using two-photon microscopy and imaging spectroscopy.

scientific article

Retinotectal plasticity in Xenopus: Anomalous ipsilateral projection following late larval eye removal

scientific article published on 01 October 1980

Reversing blood flows act through klf2a to ensure normal valvulogenesis in the developing heart

scientific article

SERCA directs cell migration and branching across species and germ layers

scientific article published on 17 August 2017

SHG nanoprobes: advancing harmonic imaging in biology

scientific article published on 06 March 2012

Second harmonic generating (SHG) nanoprobes for in vivo imaging

scientific article

Second harmonic generating (SHG) nanoprobes: a new tool for biomedical imaging

Segregation of oral from aboral ectoderm precursors is completed at fifth cleavage in the embryogenesis of Strongylocentrotus purpuratus.

scientific article published in January 1990

Sensitive imaging of spectrally overlapping flourochromes using the LSM 510 META

Single cell kinetics of intracellular, nonviral, nucleic acid delivery vehicle acidification and trafficking

scientific article published in July 2005

Spatio-Temporal Differences in Dystrophin Dynamics at mRNA and Protein Levels Revealed by a Novel FlipTrap Line

scientific article (publication date: 2015)

Specification of the Zebrafish Nervous System by Nonaxial Signals ⬇️

scientific article published on July 11, 1997

Specification of the hindbrain fate in the zebrafish.

scientific article published in May 1998

Stereotypical cell division orientation controls neural rod midline formation in zebrafish

scientific article published on 21 October 2010

Structural and Functional Characterization of Human Stem-Cell-Derived Retinal Organoids by Live Imaging

scientific article

Surface functionalization of barium titanate SHG nanoprobes for in vivo imaging in zebrafish

scientific article

Surface imaging microscopy, an automated method for visualizing whole embryo samples in three dimensions at high resolution

scientific article published in November 2002

Synaptic dynamics at the neuromuscular junction: mechanisms and models.

scientific article published on January 1990

T(2)-weighted microMRI and evoked potential of the visual system measurements during the development of hypomyelinated transgenic mice

scientific article published on 22 August 2006

Technicolour transgenics: imaging tools for functional genomics in the mouse

scientific article

The FaceBase Consortium: a comprehensive program to facilitate craniofacial research

scientific article

The Grueneberg ganglion projects to the olfactory bulb

scientific article published in November 2005

The cellular patterns of BDNF and trkB expression suggest multiple roles for BDNF during Xenopus visual system development.

scientific article published in October 1996

The dynein regulatory complex is required for ciliary motility and otolith biogenesis in the inner ear.

scientific article

The embryonic vertebrate heart tube is a dynamic suction pump

scientific article published in May 2006

The herpes virus Fc receptor gE-gI mediates antibody bipolar bridging to clear viral antigens from the cell surface

scientific article

The neuronal naturalist: watching neurons in their native habitat.

scientific article

The year(s) of the contrast agent - micro-MRI in the new millennium

scientific article

Three-dimensional real-time imaging of cardiac cell motions in living embryos

scientific article published in January 2008

Time-lapse analysis reveals a series of events by which cranial neural crest cells reroute around physical barriers

scientific article published on 25 October 2005

Time-lapse imaging of the early avian embryo

scientific article published on January 2008

Time-lapse tracing of mitotic cell divisions in the early Xenopus embryo using microscopic MRI.

scientific article published in November 2006

Tools for the Microbiome: Nano and Beyond

scientific article published on 22 December 2015

Towards a Tralfamadorian view of the embryo: multidimensional imaging of development

scientific article

Tracing transgene expression in living zebrafish embryos.

scientific article published in May 2001

Trajectory approach to two-state kinetics of single particles on sculpted energy landscapes

scientific article published on 31 July 2009

Transgenic quail as a model for research in the avian nervous system: a comparative study of the auditory brainstem

scientific article

Transverse priority phase sensitive optical coherence tomography

Two-dimensional and three-dimensional time-lapse microscopic magnetic resonance imaging of Xenopus gastrulation movements using intrinsic tissue-specific contrast.

scientific article

Using enhanced number and brightness to measure protein oligomerization dynamics in live cells

scientific article published on 01 February 2019

Vascular remodeling of the mouse yolk sac requires hemodynamic force

scientific article

Visualization of human retinal and choroidal vascular networks with phase-variance optical coherence tomography

scholarly article published 26 March 2013

Visualization of human retinal capillary networks: a comparison of intensity, speckle-variance and phase-variance optical coherence tomography

scholarly article published 9 February 2012

Visualization of human retinal micro-capillaries with phase contrast high-speed optical coherence tomography

scholarly article published 10 February 2011

Vital labeling of embryonic cells using fluorescent dyes and proteins

scientific article published on January 2008

Wavelet-based synchronization of nongated confocal microscopy data for 4D imaging of the embryonic heart

Wnt signaling components in the chicken intestinal tract

scientific article published on April 2003

Wound healing, cell communication, and DNA synthesis during imaginal disc regeneration in Drosophila.

scientific article

Zebrafish neural tube morphogenesis requires Scribble-dependent oriented cell divisions

scientific article published on 23 December 2010

bullwinkle is required for epithelial morphogenesis during Drosophila oogenesis

scientific article published in March 2004

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