Search filters

List of works by Maureen Sartor

5-Hydroxymethylation highlights the heterogeneity in keratinization and cell junctions in head and neck cancers

scientific article published on 17 November 2020

A Mouse Model of X-linked Intellectual Disability Associated with Impaired Removal of Histone Methylation

scientific article published on 20 January 2016

A genetic network model of cellular responses to lithium treatment and cocaine abuse in bipolar disorder.

scientific article

A genome-wide siRNA screen reveals positive and negative regulators of the NOD2 and NF-κB signaling pathways.

scientific article published on 15 January 2013

A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus

scientific article

A role for the mitogen-activated protein kinase kinase kinase 1 in epithelial wound healing.

scientific article

Abstract 2214: An integrative approach to reveal driver gene fusions from paired end sequencing data in cancer

article

Adipogenic Differentiation of Thyroid Cancer Cells Through the Pax8-PPARγ Fusion Protein Is Regulated by Thyroid Transcription Factor 1 (TTF-1).

scientific article published on 19 July 2016

Age-related epigenome-wide DNA methylation and hydroxymethylation in longitudinal mouse blood

scientific article published on 23 August 2018

An integrated genome-wide approach to discover tumor-specific antigens as potential immunologic and clinical targets in cancer

scientific article

An integrative approach to reveal driver gene fusions from paired-end sequencing data in cancer

scientific article

Appearance frequency modulated gene set enrichment testing

scientific article

Application of cDNA microarray technology to in vitro toxicology and the selection of genes for a real-time RT-PCR-based screen for oxidative stress in Hep-G2 cells.

scientific article published in July 2002

Arsenite-induced aryl hydrocarbon receptor nuclear translocation results in additive induction of phase I genes and synergistic induction of phase II genes.

scientific article

BACH1 is a specific repressor of HMOX1 that is inactivated by arsenite

scientific article published on 11 June 2008

Bioinformatics for High-Throughput Toxico-Epigenomics Studies

Bisphenol A-associated alterations in genome-wide DNA methylation and gene expression patterns reveal sequence-dependent and non-monotonic effects in human fetal liver

scientific article

Bisphenol A-associated alterations in the expression and epigenetic regulation of genes encoding xenobiotic metabolizing enzymes in human fetal liver.

scientific article

Bisphenol A-associated epigenomic changes in prepubescent girls: a cross-sectional study in Gharbiah, Egypt.

scientific article published on 16 April 2013

Broad-Enrich: functional interpretation of large sets of broad genomic regions

scientific article

Butylhydroquinone protects cells genetically deficient in glutathione biosynthesis from arsenite-induced apoptosis without significantly changing their prooxidant status.

scientific article published on 13 July 2005

Cadmium Exposure Inhibits Branching Morphogenesis and Causes Alterations Consistent With HIF-1α Inhibition in Human Primary Breast Organoids

scientific article published on 01 August 2018

Candidate genes controlling pulmonary function in mice: transcript profiling and predicted protein structure.

scientific article

ChIP-Enrich: gene set enrichment testing for ChIP-seq data

scientific article

Chromium inhibits transcription from polycyclic aromatic hydrocarbon-inducible promoters by blocking the release of histone deacetylase and preventing the binding of p300 to chromatin.

scientific article published on 18 November 2003

Comparison of rat olfactory mucosal responses to carcinogenic and non-carcinogenic chloracetanilides.

scientific article

Comprehensive analysis of DNA methylation in head and neck squamous cell carcinoma indicates differences by survival and clinicopathologic characteristics

scientific article

Comprehensive enhancer-target gene assignments improve gene set level interpretation of genome-wide regulatory data

scientific article published on 26 April 2022

ConceptGen: a gene set enrichment and gene set relation mapping tool

scientific article

ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts.

scientific article published on 21 January 2016

Conditional activation of RET/PTC3 and BRAFV600E in thyroid cells is associated with gene expression profiles that predict a preferential role of BRAF in extracellular matrix remodeling.

scientific article

Convergence of genetic influences in comorbidity

scientific article

Coupled matrix-matrix and coupled tensor-matrix completion methods for predicting drug-target interactions

scientific article published on 18 March 2020

Critical regulation of genes for tumor cell migration by AP-1.

scientific article

Current status and future perspectives for sequencing livestock genomes

scientific article

Detection of differential DNA methylation in repetitive DNA of mice and humans perinatally exposed to bisphenol A

scientific article

Developmental characteristics of adapting mouse small intestine crypt cells.

scientific article published in April 2006

Developmental transcriptome analysis of human erythropoiesis.

scientific article

Different global gene expression profiles in benzo[a]pyrene- and dioxin-treated vascular smooth muscle cells of AHR-knockout and wild-type mice.

scientific article published in January 2004

Duration-dependent cytoprotective versus inflammatory effects of lung epithelial fibroblast growth factor-7 expression

scientific article published on 01 October 2007

ER-stress-induced transcriptional regulation increases protein synthesis leading to cell death.

scientific article published on 28 April 2013

Effect of concentration and duration of particulate matter exposure on the transcriptome and DNA methylome of bronchial epithelial cells

scientific article published on 28 February 2021

Effect of simulated microgravity on oxidation-sensitive gene expression in PC12 cells

scientific article published on January 2006

Epigenetics: relevance and implications for public health

scientific article published on January 2014

Epigenome-wide DNA methylation analysis implicates neuronal and inflammatory signaling pathways in adult murine hepatic tumorigenesis following perinatal exposure to bisphenol A.

scientific article published on 23 June 2016

Erratum to: Machine learning approaches and databases for prediction of drug-target interaction: a survey paper

scientific article published on 11 February 2020

Expressed HNSCC variants by HPV-status in a well-characterized Michigan cohort

scientific article published in Scientific Reports

Expression of genes in the TGF-beta signaling pathway is significantly deregulated in smooth muscle cells from aorta of aryl hydrocarbon receptor knockout mice

scientific article

Folliculin contributes to VHL tumor suppressing activity in renal cancer through regulation of autophagy

scientific article

GENE-35. IDH1-R132H INDUCES AN EPIGENETIC REPROGRAMMING IN GLIOMA IMPACTING MEDIAN SURVIVAL, DNA-DAMAGE RESPONSE AND RADIO-SENSITIVITY

Gene expression centroids that link with low intrinsic aerobic exercise capacity and complex disease risk

scientific article

Gene expression changes during the development of acute lung injury: role of transforming growth factor beta.

scientific article published on 11 August 2005

Gene expression profiles of mouse aorta and cultured vascular smooth muscle cells differ widely, yet show common responses to dioxin exposure.

scientific article published on January 2004

Gene expression profiling identifies lobe-specific and common disruptions of multiple gene networks in testosterone-supported, 17beta-estradiol- or diethylstilbestrol-induced prostate dysplasia in Noble rats

scientific article

Gene expression profiling of blood to predict the onset of leukemia.

scientific article published on 19 October 2008

Genome-wide DNA methylation differences between late-onset Alzheimer's disease and cognitively normal controls in human frontal cortex.

scientific article published on January 2012

Genome-wide analyses show that nuclear and cytoplasmic RNA levels are differentially affected by dioxin

scientific article

Genome-wide binding of the orphan nuclear receptor TR4 suggests its general role in fundamental biological processes

scientific article

Genome-wide methylation and expression differences in HPV(+) and HPV(-) squamous cell carcinoma cell lines are consistent with divergent mechanisms of carcinogenesis

scientific article

Genomewide analysis of aryl hydrocarbon receptor binding targets reveals an extensive array of gene clusters that control morphogenetic and developmental programs.

scientific article published on 24 March 2009

Genomewide association analysis of respiratory syncytial virus infection in mice

scientific article

Genomic binding and regulation of gene expression by the thyroid carcinoma-associated PAX8-PPARG fusion protein

scientific article published on 16 November 2015

Genomic binding of PAX8-PPARG fusion protein regulates cancer-related pathways and alters the immune landscape of thyroid cancer.

scientific article published on 20 December 2016

Genomic profile of matrix and vasculature remodeling in TGF-alpha induced pulmonary fibrosis

scientific article

Group B Streptococcus Activates Transcriptomic Pathways Related to Premature Birth in Human Extraplacental Membranes In Vitro

scientific article published on 16 November 2017

HPV Integration in HNSCC Correlates with Survival Outcomes, Immune Response Signatures, and Candidate Drivers

scientific article published on 19 September 2017

Heterogeneity of Human Breast Stem and Progenitor Cells as Revealed by Transcriptional Profiling.

scientific article published on 29 March 2018

Hypoxia and hypoxia mimetics decrease aquaporin 5 (AQP5) expression through both hypoxia inducible factor-1α and proteasome-mediated pathways

scientific article

IDH1-R132H acts as a tumor suppressor in glioma via epigenetic up-regulation of the DNA damage response

scientific article published on 01 February 2019

IDH1R132H acts as a tumor suppressor in glioma via epigenetic upregulation of the DNA damage response

Identification of a NF-κB cardioprotective gene program: NF-κB regulation of Hsp70.1 contributes to cardioprotection after permanent coronary occlusion

scientific article published on 23 March 2011

Identification of maternally regulated fetal gene networks in the placenta with a novel embryo transfer system in mice.

scientific article

In vitro multipotent differentiation and barrier function of a human mammary epithelium.

scientific article

Inhibitor of kappaB kinase beta regulates redox homeostasis by controlling the constitutive levels of glutathione

scientific article

Integrating DNA Methylation and Hydroxymethylation Data with the Mint Pipeline

scientific article

Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments

scientific article

Interleukin 22 Signaling Regulates Acinar Cell Plasticity to Promote Pancreatic Tumor Development in Mice

scientific article published on 14 December 2019

LRpath analysis reveals common pathways dysregulated via DNA methylation across cancer types

scientific article

LRpath: a logistic regression approach for identifying enriched biological groups in gene expression data.

scientific article

Ligand-independent regulation of transforming growth factor beta1 expression and cell cycle progression by the aryl hydrocarbon receptor.

scientific article published on 02 July 2007

Longitudinal Effects of Developmental Bisphenol A Exposure on Epigenome-Wide DNA Hydroxymethylation at Imprinted Loci in Mouse Blood

scientific article published on 23 July 2018

Loss of IκB kinase β promotes myofibroblast transformation and senescence through activation of the ROS-TGFβ autocrine loop

scientific article published on 5 March 2016

Machine learning approaches and databases for prediction of drug-target interaction: a survey paper

scientific article published on 17 January 2020

Melanocortin 1 receptor genotype: an important determinant of the damage response of melanocytes to ultraviolet radiation.

scientific article published on 2 June 2010

Metab2MeSH: annotating compounds with medical subject headings

scientific article

MethylSig: a whole genome DNA methylation analysis pipeline.

scientific article

Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data.

scientific article

MicroRNA-320 is involved in the regulation of cardiac ischemia/reperfusion injury by targeting heat-shock protein 20

scientific article

MicroRNAs and regeneration: Let-7 members as potential regulators of dedifferentiation in lens and inner ear hair cell regeneration of the adult newt

scientific article

Microarray analysis of cytoplasmic versus whole cell RNA reveals a considerable number of missed and false positive mRNAs

scientific article published on 24 August 2009

Microarray analysis reveals novel features of the muscle aging process in men and women

scientific article published on 15 February 2013

Microarray results improve significantly as hybridization approaches equilibrium.

scientific article

Modeling complex genetic and environmental influences on comorbid bipolar disorder with tobacco use disorder.

scientific article

Mono-2-ethylhexyl phthalate disrupts neurulation and modifies the embryonic redox environment and gene expression.

scientific article published on 7 May 2016

NDN and CD1A are novel prognostic methylation markers in patients with head and neck squamous carcinomas.

scientific article published on 30 October 2015

NF-kappaB driven cardioprotective gene programs; Hsp70.3 and cardioprotection after late ischemic preconditioning.

scientific article published on 16 July 2010

Neural system-enriched gene expression: relationship to biological pathways and neurological diseases.

scientific article published on 08 July 2004

Nonredundant functions of alphabeta and gammadelta T cells in acrolein-induced pulmonary pathology.

scientific article published on 29 May 2008

Normal gene expression in male F344 rat nasal transitional and respiratory epithelium.

scientific article published in February 2002

Novel Epigenetic Biomarkers Mediating Bisphenol A Exposure and Metabolic Phenotypes in Female Mice

scientific article published on 8 November 2016

Novel bioinformatics method for identification of genome-wide non-canonical spliced regions using RNA-Seq data.

scientific article

Novel role of ASH1L histone methyltransferase in anaplastic thyroid carcinoma

scientific article published on 12 May 2020

PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data.

scientific article

Perinatal bisphenol A exposure promotes dose-dependent alterations of the mouse methylome

scientific article

Perinatal increases in TGF-{alpha} disrupt the saccular phase of lung morphogenesis and cause remodeling: microarray analysis.

scientific article published on 27 April 2007

Poly-Enrich: count-based methods for gene set enrichment testing with genomic regions

scientific article published on 06 February 2020

Pretreatment dietary intake is associated with tumor suppressor DNA methylation in head and neck squamous cell carcinomas.

scientific article

RET/PTC-induced gene expression in thyroid PCCL3 cells reveals early activation of genes involved in regulation of the immune response.

scientific article published on June 2005

RNA-Enrich: a cut-off free functional enrichment testing method for RNA-seq with improved detection power

scientific article published on 25 November 2015

Rapid and weight-independent improvement of glucose tolerance induced by a peptide designed to elicit apoptosis in adipose tissue endothelium.

scientific article

Reduced NHE3-mediated Na+ absorption increases survival and decreases the incidence of intestinal obstructions in cystic fibrosis mice

scientific article published on 22 January 2009

Regulation of the human endogenous retrovirus K (HML-2) transcriptome by the HIV-1 Tat protein

scientific article

Resistance exercise training influences skeletal muscle immune activation: a microarray analysis

scientific article published on 3 November 2011

SEC24A deficiency lowers plasma cholesterol through reduced PCSK9 secretion

scientific article

Secreted nuclear protein DEK regulates hematopoiesis through CXCR2 signaling

scientific article published on 20 May 2019

Sequencing of first-strand cDNA library reveals full-length transcriptomes.

scientific article published on 21 January 2015

Sex-Specific Programming of Cardiac DNA Methylation by Developmental Phthalate Exposure ⬇️

scientific article published on 05 August 2020

Short- and long-term effects of perinatal phthalate exposures on metabolic pathways in the mouse liver

scientific article published on 23 December 2020

Significant association between host transcriptome-derived HPV oncogene E6* influence score and carcinogenic pathways, tumor size, and survival in head and neck cancer

scientific article published on 14 May 2020

Single cell analysis of the gene expression effects of developmental lead (Pb) exposure on the mouse hippocampus

scientific article published on 27 May 2020

Skeletal muscle gene expression in response to resistance exercise: sex specific regulation

scientific article

Somatic expression of piRNA and associated machinery in the mouse identifies short, tissue-specific piRNA

scientific article published on 08 April 2019

Soy Isoflavone Supplementation Increases Long Interspersed Nucleotide Element-1 (LINE-1) Methylation in Head and Neck Squamous Cell Carcinoma

scientific article published on 12 March 2019

Stability of methylation markers in head and neck squamous cell carcinoma.

scientific article published on 13 November 2015

Subtypes of HPV-Positive Head and Neck Cancers Are Associated with HPV Characteristics, Copy Number Alterations, PIK3CA Mutation, and Pathway Signatures

scientific article

Surfactant-associated protein B is critical to survival in nickel-induced injury in mice

scientific article published on 8 January 2009

THINK Back: KNowledge-based Interpretation of High Throughput data

scientific article

Testing Proximity of Genomic Regions to Transcription Start Sites and Enhancers Complements Gene Set Enrichment Testing

scientific article published on 06 March 2020

The IRE1α/XBP1s Pathway Is Essential for the Glucose Response and Protection of β Cells.

scientific article published on 15 October 2015

The NIEHS TaRGET II Consortium and environmental epigenomics.

scientific article published in March 2018

The circadian clock in oral health and diseases

scientific article

The role of T cells in the regulation of acrolein-induced pulmonary inflammation and epithelial-cell pathology.

scientific article published on December 2009

The role of metallothionein in the pathogenesis of acute lung injury

scientific article

The role of the histone H3 variant CENPA in prostate cancer

scientific article published on 05 May 2020

Tissue and sex-specific programming of DNA methylation by perinatal lead exposure: implications for environmental epigenetics studies

scientific article published on 08 November 2020

Tissue- and Sex-Specific DNA Methylation Changes in Mice Perinatally Exposed to Lead (Pb)

scientific article published on 21 August 2020

Transcriptome analyses in normal prostate epithelial cells exposed to low-dose cadmium: oncogenic and immunomodulations involving the action of tumor necrosis factor

scientific article published on June 2008

Transcriptomic profiling of curcumin-treated human breast stem cells identifies a role for stearoyl-coa desaturase in breast cancer prevention

scientific article published on 15 June 2016

Tumor infiltrating lymphocytes after neoadjuvant IRX-2 immunotherapy in oral squamous cell carcinoma: Interim findings from the INSPIRE trial

scientific article published on 29 July 2020

Unique bisphenol A transcriptome in prostate cancer: novel effects on ERbeta expression that correspond to androgen receptor mutation status

scientific article

Universal concept signature analysis: genome-wide quantification of new biological and pathological functions of genes and pathways

scientific article published on 18 October 2019

annotatr: genomic regions in context

scientific article

Paulina is supported by:

About Paulina

Help