List of works - Jean-Francois Humbert

A day in the life of microcystis aeruginosa strain PCC 7806 as revealed by a transcriptomic analysis.

scientific article

A high-throughput sequencing ecotoxicology study of freshwater bacterial communities and their responses to tebuconazole.

scientific article published on 15 September 2014

A molecular tool for species identification and benzimidazole resistance diagnosis in larval communities of small ruminant parasites

scientific article published on 01 August 2000

Advances in the detection of phycotoxins and cyanotoxins

scientific article published on 01 July 2010

Application of a spectrofluorimetric tool (bbe BenthoTorch) for monitoring potentially toxic benthic cyanobacteria in rivers.

scientific article

Bacterial Communities Associated with Four Cyanobacterial Genera Display Structural and Functional Differences: Evidence from an Experimental Approach.

scientific article

Bacterial communities associated with Microcystis colonies differ from free-living communities living in the same ecosystem

scientific article

Can participatory approaches strengthen the monitoring of cyanobacterial blooms in developing countries? Results from a pilot study conducted in the Lagoon Aghien (Ivory Coast)

scientific article published on 24 September 2020

Comment on "Meta-analysis reveals declines in terrestrial but increases in freshwater insect abundances"

scientific article published on 01 December 2020

Comparative sensitivity to the fungicide tebuconazole of biofilm and plankton microbial communities in freshwater ecosystems

scientific article published on 15 September 2013

Comparison of eukaryotic phytobenthic community composition in a polluted river by partial 18S rRNA gene cloning and sequencing.

scientific article published on 14 October 2002

Comparison of primer sets for the study of Planctomycetes communities in lentic freshwater ecosystems ⬇️

scientific article published on October 26, 2010

Comparison of the genomic fingerprints generated by the random amplification of polymorphic DNA between precocious lines and parental strains of Eimeria spp. from the rabbit

scientific article published on 01 January 1997

Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems.

scientific article

Competition between microcystin- and non-microcystin-producing Planktothrix agardhii (cyanobacteria) strains under different environmental conditions

scientific article published on 28 August 2008

Correction: Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

scientific article published on 7 January 2016

Deciphering biodiversity and interactions between bacteria and microeukaryotes within epilithic biofilms from the Loue River, France.

scientific article

Diversity of benzimidazole-resistance alleles in populations of small ruminant parasites.

scientific article published on June 2002

Diversity, spatial distribution and activity of fungi in freshwater ecosystems

scientific article published on 21 February 2019

Dramatic changes in a phytoplankton community in response to local and global pressures: a 24-year survey of the river Loire (France).

scientific article

Environmental context of Cylindrospermopsis raciborskii (Cyanobacteria) blooms in a shallow pond in France.

scientific article

First evidence of the existence of semi-cryptic species and of a phylogeographic structure in the Gomphonema parvulum (Kützing) Kützing complex (Bacillariophyta).

scientific article published on 28 August 2013

Fitness of benzimidazole-resistant and -susceptible worms of Teladorsagia circumcincta, a nematode parasite of small ruminants

scientific article published on 01 December 1998

Genetic diversity in Microcystis populations of a French storage reservoir assessed by sequencing of the 16S-23S rRNA intergenic spacer.

scientific article published in February 2005

Genetic diversity of Cylindrospermopsis strains (cyanobacteria) isolated from four continents.

scientific article

High-frequency monitoring of the genetic diversity and the potential toxicity of a Microcystis aeruginosa bloom in a French shallow lake

scientific article published on 01 January 2012

Impacts of nutrient loading and fish grazing on the phytoplankton community and cyanotoxin production in a shallow tropical lake: Results from mesocosm experiments

scientific article published in 2022

Importance of the mutation of amino acid 200 of the isotype 1 beta-tubulin gene in the benzimidazole resistance of the small-ruminant parasite Teladorsagia circumcincta.

scientific article

Influence of local and global environmental parameters on the composition of cyanobacterial mats in a tropical lagoon

scientific article

Influence of sampling strategies on the monitoring of cyanobacteria in shallow lakes: lessons from a case study in France.

scientific article

Insights into the Planktothrix genus: Genomic and metabolic comparison of benthic and planktic strains

scientific article (publication date: 24 January 2017)

MOLECULAR CHARACTERIZATION OF THE DIVERSITY AND POTENTIAL TOXICITY OF CYANOBACTERIAL MATS IN TWO TROPICAL LAGOONS IN THE SOUTH PACIFIC OCEAN(1).

scientific article published on 19 March 2012

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget--France).

scientific article

Mitochondrial DNA variation in benzimidazole-resistant and -susceptible populations of the small ruminant parasite Teladorsagia circumcincta.

scientific article

Molecular approaches for monitoring potentially toxic marine and freshwater phytoplankton species.

scientific article published on 25 March 2010

Molecular approaches to studying benzimidazole resistance in trichostrongylid nematode parasites of small ruminants.

scientific article

Molecular approaches to the assessment of biodiversity in aquatic microbial communities.

scientific article published in June 2005

Multiple processes acting from local to large geographical scales shape bacterial communities associated with Phormidium (cyanobacteria) biofilms in French and New Zealand rivers

scientific article published in Scientific Reports

New molecular evidence that Teladorsagia circumcincta (Nematoda: Trichostrongylidea) is a species complex.

scientific article

Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms.

scientific article

Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data.

scientific article published in March 2017

Planctomycetes in lakes: poor or strong competitors for phosphorus?

scientific article

Role of bacteria in the production and degradation of Microcystis cyanopeptides.

scientific article published on 25 February 2016

Spatial and Temporal Variability in the Development and Potential Toxicity of Biofilms in the Tarn River, France

article

Spatial heterogeneity of periphytic microbial communities in a small pesticide-polluted river.

scientific article

Spatial variability in the abundance and composition of the free-living bacterioplankton community in the pelagic zone of Lake Bourget (France).

scientific article published in October 2006

Spatiotemporal changes in the genetic diversity in French bloom-forming populations of the toxic cyanobacterium, Microcystis aeruginosa.

scientific article published in July 2009

Spatiotemporal changes in the genetic diversity of a bloom-forming Microcystis aeruginosa (cyanobacteria) population.

scientific article

Spatiotemporal changes in the structure and composition of a less-abundant bacterial phylum (Planctomycetes) in two perialpine lakes.

scientific article

Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

scientific article

Study by ribosomal DNA ITS 2 sequencing and RAPD analysis on the systematics of four Metastrongylus species (Nematoda:Metastrongyloidea).

scientific article published on August 1997

Technical challenges in metatranscriptomic studies applied to the bacterial communities of freshwater ecosystems

scientific article published on 13 September 2014

Temporal variations in the dynamics of potentially microcystin-producing strains in a bloom-forming Planktothrix agardhii (Cyanobacterium) population.

scientific article published on 25 April 2008

Unusual cohabitation and competition between Planktothrix rubescens and Microcystis sp. (cyanobacteria) in a subtropical reservoir (Hammam Debagh) located in Algeria.

scientific article

Variations in the microcystin production of Planktothrix rubescens (cyanobacteria) assessed from a four-year survey of Lac du Bourget (France) and from laboratory experiments.

scientific article published in October 2005

List of works by Jean-Francois Humbert

A day in the life of microcystis aeruginosa strain PCC 7806 as revealed by a transcriptomic analysis.

A high-throughput sequencing ecotoxicology study of freshwater bacterial communities and their responses to tebuconazole.

A molecular tool for species identification and benzimidazole resistance diagnosis in larval communities of small ruminant parasites

Advances in the detection of phycotoxins and cyanotoxins

Application of a spectrofluorimetric tool (bbe BenthoTorch) for monitoring potentially toxic benthic cyanobacteria in rivers.

Bacterial Communities Associated with Four Cyanobacterial Genera Display Structural and Functional Differences: Evidence from an Experimental Approach.

Bacterial communities associated with Microcystis colonies differ from free-living communities living in the same ecosystem

Can participatory approaches strengthen the monitoring of cyanobacterial blooms in developing countries? Results from a pilot study conducted in the Lagoon Aghien (Ivory Coast)

Comment on "Meta-analysis reveals declines in terrestrial but increases in freshwater insect abundances"

Comparative sensitivity to the fungicide tebuconazole of biofilm and plankton microbial communities in freshwater ecosystems

Comparison of eukaryotic phytobenthic community composition in a polluted river by partial 18S rRNA gene cloning and sequencing.

Comparison of primer sets for the study of Planctomycetes communities in lentic freshwater ecosystems ⬇️

Comparison of the genomic fingerprints generated by the random amplification of polymorphic DNA between precocious lines and parental strains of Eimeria spp. from the rabbit

Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems.

Competition between microcystin- and non-microcystin-producing Planktothrix agardhii (cyanobacteria) strains under different environmental conditions

Correction: Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

Deciphering biodiversity and interactions between bacteria and microeukaryotes within epilithic biofilms from the Loue River, France.

Diversity of benzimidazole-resistance alleles in populations of small ruminant parasites.

Diversity, spatial distribution and activity of fungi in freshwater ecosystems

Dramatic changes in a phytoplankton community in response to local and global pressures: a 24-year survey of the river Loire (France).

Environmental context of Cylindrospermopsis raciborskii (Cyanobacteria) blooms in a shallow pond in France.

First evidence of the existence of semi-cryptic species and of a phylogeographic structure in the Gomphonema parvulum (Kützing) Kützing complex (Bacillariophyta).

Fitness of benzimidazole-resistant and -susceptible worms of Teladorsagia circumcincta, a nematode parasite of small ruminants

Genetic diversity in Microcystis populations of a French storage reservoir assessed by sequencing of the 16S-23S rRNA intergenic spacer.

Genetic diversity of Cylindrospermopsis strains (cyanobacteria) isolated from four continents.

High-frequency monitoring of the genetic diversity and the potential toxicity of a Microcystis aeruginosa bloom in a French shallow lake

Impacts of nutrient loading and fish grazing on the phytoplankton community and cyanotoxin production in a shallow tropical lake: Results from mesocosm experiments

Importance of the mutation of amino acid 200 of the isotype 1 beta-tubulin gene in the benzimidazole resistance of the small-ruminant parasite Teladorsagia circumcincta.

Influence of local and global environmental parameters on the composition of cyanobacterial mats in a tropical lagoon

Influence of sampling strategies on the monitoring of cyanobacteria in shallow lakes: lessons from a case study in France.

Insights into the Planktothrix genus: Genomic and metabolic comparison of benthic and planktic strains

MOLECULAR CHARACTERIZATION OF THE DIVERSITY AND POTENTIAL TOXICITY OF CYANOBACTERIAL MATS IN TWO TROPICAL LAGOONS IN THE SOUTH PACIFIC OCEAN(1).

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget--France).

Mitochondrial DNA variation in benzimidazole-resistant and -susceptible populations of the small ruminant parasite Teladorsagia circumcincta.

Molecular approaches for monitoring potentially toxic marine and freshwater phytoplankton species.

Molecular approaches to studying benzimidazole resistance in trichostrongylid nematode parasites of small ruminants.

Molecular approaches to the assessment of biodiversity in aquatic microbial communities.

Multiple processes acting from local to large geographical scales shape bacterial communities associated with Phormidium (cyanobacteria) biofilms in French and New Zealand rivers

New molecular evidence that Teladorsagia circumcincta (Nematoda: Trichostrongylidea) is a species complex.

Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms.

Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data.

Planctomycetes in lakes: poor or strong competitors for phosphorus?

Role of bacteria in the production and degradation of Microcystis cyanopeptides.

Spatial and Temporal Variability in the Development and Potential Toxicity of Biofilms in the Tarn River, France

Spatial heterogeneity of periphytic microbial communities in a small pesticide-polluted river.

Spatial variability in the abundance and composition of the free-living bacterioplankton community in the pelagic zone of Lake Bourget (France).

Spatiotemporal changes in the genetic diversity in French bloom-forming populations of the toxic cyanobacterium, Microcystis aeruginosa.

Spatiotemporal changes in the genetic diversity of a bloom-forming Microcystis aeruginosa (cyanobacteria) population.

Spatiotemporal changes in the structure and composition of a less-abundant bacterial phylum (Planctomycetes) in two perialpine lakes.

Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

Study by ribosomal DNA ITS 2 sequencing and RAPD analysis on the systematics of four Metastrongylus species (Nematoda:Metastrongyloidea).

Technical challenges in metatranscriptomic studies applied to the bacterial communities of freshwater ecosystems

Temporal variations in the dynamics of potentially microcystin-producing strains in a bloom-forming Planktothrix agardhii (Cyanobacterium) population.

Unusual cohabitation and competition between Planktothrix rubescens and Microcystis sp. (cyanobacteria) in a subtropical reservoir (Hammam Debagh) located in Algeria.

Variations in the microcystin production of Planktothrix rubescens (cyanobacteria) assessed from a four-year survey of Lac du Bourget (France) and from laboratory experiments.