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List of works by Emmanuelle Lerat

A bunch of fun-guys: the whole-genome view of yeast evolution.

scientific article published on January 2005

A new genome-wide method to track horizontally transferred sequences: application to Drosophila

scientific article

An Overview of Duplicated Gene Detection Methods: Why the Duplication Mechanism Has to Be Accounted for in Their Choice

scientific article published on 04 September 2020

Codon usage and the origin of P elements

scientific article published on 01 March 2000

Codon usage by transposable elements and their host genes in five species.

scientific article published in May 2002

Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes ⬇️

scientific article published on December 14, 2010

Does the Presence of Transposable Elements Impact the Epigenetic Environment of Human Duplicated Genes?

article

Evolutionary history of LTR-retrotransposons among 20 Drosophila species

scientific article

Exploiting the architecture and the features of the microsporidian genomes to investigate diversity and impact of these parasites on ecosystems.

scientific article

Genes Devoid of Full-Length Transposable Element Insertions are Involved in Development and in the Regulation of Transcription in Human and Closely Related Species

scientific article published on 27 August 2010

Hijacking of host cellular functions by an intracellular parasite, the microsporidian Anncaliia algerae.

scientific article

Identifying repeats and transposable elements in sequenced genomes: how to find your way through the dense forest of programs.

scientific article

Influence of the transposable element neighborhood on human gene expression in normal and tumor tissues.

scientific article published on 6 April 2007

Is the evolution of transposable elements modular?

scientific article published on 01 January 1999

Losing helena: the extinction of a drosophila line-like element.

scientific article

Maintenance in the chicken genome of the retroviral-like cENS gene family specifically expressed in early embryos.

scientific article published on 2 August 2007

Massive colonization of protein-coding exons by selfish genetic elements in Paramecium germline genomes

scientific article published on 29 July 2021

Microsporidian genomes harbor a diverse array of transposable elements that demonstrate an ancestry of horizontal exchange with metazoans.

scientific article

On the Importance to Acknowledge Transposable Elements in Epigenomic Analyses

scientific article published on 31 March 2019

Population-specific dynamics and selection patterns of transposable element insertions in European natural populations

scientific article published on 17 January 2019

Psi-Phi: exploring the outer limits of bacterial pseudogenes.

scientific article published on 12 October 2004

Retrotransposons and retroviruses: analysis of the envelope gene.

scientific article published in September 1999

Sequence divergence within transposable element families in the Drosophila melanogaster genome

scientific article

Simulation-based estimation of branching models for LTR retrotransposons

scientific article

Specific activation of an I-like element in Drosophila interspecific hybrids.

scientific article

Subcellular localization of ENS-1/ERNI in chick embryonic stem cells.

scientific article

TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes

scientific article published in February 2017

The French way of life of mobile DNA: Meeting report on the 17 French Congress on transposable elements (Lyon, July 4-6 2011).

scientific article published on July 2011

The Prediction and Validation of Small CDSs Expand the Gene Repertoire of the Smallest Known Eukaryotic Genomes.

scientific article published on 30 September 2015

The relative abundance of dinucleotides in transposable elements in five species

scientific article published on 01 June 2002

The source of laterally transferred genes in bacterial genomes

scientific article

The transposable element environment of human genes is associated with histone and expression changes in cancer

scientific article

UrQt: an efficient software for the Unsupervised Quality trimming of NGS data.

scientific article published on 29 April 2015

“One code to find them all”: a perl tool to conveniently parse RepeatMasker output files

scientific article published in May 2014

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