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List of works by Rajeev Kumar Varshney

2-Deoxy-D-glucose and 6-aminonicotinamide-mediated Nrf2 down regulation leads to radiosensitization of malignant cells via abrogation of GSH-mediated defense ⬇️

scientific article published on October 1, 2012

5Gs for crop genetic improvement

scientific article published on 28 January 2020

A 1,000-loci transcript map of the barley genome: new anchoring points for integrative grass genomics

scientific article published on 12 January 2007

A Combined Comparative Transcriptomic, Metabolomic, and Anatomical Analyses of Two Key Domestication Traits: Pod Dehiscence and Seed Dormancy in Pea (Pisum sp.).

scientific article published on 25 April 2017

A QTL analysis of aluminium tolerance in barley, using gene-based markers

scientific article published in December 2009

A QTL study on late leaf spot and rust revealed one major QTL for molecular breeding for rust resistance in groundnut (Arachis hypogaea L.).

scientific article

A SSR kit to study genetic diversity in chickpea (Cicer arietinum L.)

scientific article published in July 2014

A SWEET solution to rice blight

scientific article published on 01 November 2019

A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies

scientific article published on 5 April 2014

A combination of 2-deoxy-d-glucose and 6-aminonicotinamide induces oxidative stress mediated selective radiosensitization of malignant cells via mitochondrial dysfunction ⬇️

scientific article published on June 10, 2011

A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.).

scientific article published on 15 November 2009

A comprehensive transcriptome assembly of Pigeonpea (Cajanus cajan L.) using sanger and second-generation sequencing platforms

scientific article published on 11 January 2012

A decade of Tropical Legumes projects: Development and adoption of improved varieties, creation of market-demand to benefit smallholder farmers and empowerment of national programmes in sub-Saharan Africa and South Asia

scientific article published on 14 August 2019

A diagnostic marker kit for Fusarium wilt and sterility mosaic diseases resistance in pigeonpea

scientific article published on 20 October 2020

A high density barley microsatellite consensus map with 775 SSR loci

scientific article

A high-density consensus map of barley to compare the distribution of QTLs for partial resistance to Puccinia hordei and of defence gene homologues

scientific article published on 18 November 2006

A simple hybridization-based strategy for the generation of non-redundant EST collections—a case study in barley (Hordeum vulgare L.)

scientific article published in September 2004

A sorghum practical haplotype graph facilitates genome-wide imputation and cost-effective genomic prediction

scientific article published on 25 March 2020

A systematic dissection of the mechanisms underlying the natural variation of silique number in rapeseed (Brassica napus L.) germplasm

scientific article published on 17 September 2019

A western Sahara centre of domestication inferred from pearl millet genomes

scientific article published on 06 August 2018

AFLP-based molecular characterization of an elite germplasm collection of Jatropha curcas L., a biofuel plant

scientific article published on 20 January 2009

Accelerating genetic gains in legumes for the development of prosperous smallholder agriculture: integrating genomics, phenotyping, systems modelling and agronomy

scientific article published on 5 March 2018

Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics

scientific article published in December 2013

Adapting legume crops to climate change using genomic approaches.

scientific article published on 30 March 2018

Advances and opportunities in unraveling cold‐tolerance mechanisms in the world's primary staple food crops

scientific article published in 2023

Advances in Arachis genomics for peanut improvement

scientific article published on 9 November 2011

Advances in Crop Improvement and Delivery Research for Nutritional Quality and Health Benefits of Groundnut (Arachis hypogaea L.).

scientific article published on 21 February 2020

Advances in cereal genomics and applications in crop breeding

scientific article published on 7 September 2006

Advances in genetics and molecular breeding of three legume crops of semi-arid tropics using next-generation sequencing and high-throughput genotyping technologies

scientific article published in November 2012

Agricultural biotechnology for crop improvement in a variable climate: hope or hype?

scientific article published on 15 April 2011

Agronomic Performance of Chickpea Affected by Drought Stress at Different Growth Stages

scientific article published in 2022

Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers

scientific article published on 5 June 2014

An "Axiom Cajanus SNP Array" based high density genetic map and QTL mapping for high-selfing flower and seed quality traits in pigeonpea

scientific article published on 21 March 2019

An integrated SNP mining and utilization (ISMU) pipeline for next generation sequencing data

scientific article

An integrated pipeline of open source software adapted for multi-CPU architectures: use in the large-scale identification of single nucleotide polymorphisms

scientific article published on January 2007

An international reference consensus genetic map with 897 marker loci based on 11 mapping populations for tetraploid groundnut (Arachis hypogaea L.).

scientific article

An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L.) Millspaugh] derived from six mapping populations

scientific article published on 8 July 2012

Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.).

scientific article published on 29 March 2011

Analysis of genetic diversity and population structure of peanut cultivars and breeding lines from China, India and the US using simple sequence repeat markers

scientific article published on 15 July 2015

Analytical and Decision Support Tools for Genomics-Assisted Breeding

scientific article

Application of genomics to molecular breeding of wheat and barley

scientific article published on January 2007

Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects

scientific article (publication date: 2015)

Aspergillus flavus infection triggered immune responses and host-pathogen cross-talks in groundnut during in-vitro seed colonization

scientific article published on 29 August 2017

Assessing the prospects of Streptomyces sp. RP1A-12 in managing groundnut stem rot disease caused by Sclerotium rolfsii Sacc

scientific article published on 18 January 2016

Assessment and comparison of AFLP and SSR based molecular genetic diversity in Indian isolates of Ascochyta rabiei, a causal agent of Ascochyta blight in chickpea (Cicer arietinum L.)

scientific article published on 16 January 2009

Author Correction: A chickpea genetic variation map based on the sequencing of 3,366 genomes

scientific article published in 2022

Botanical Description of Pigeonpea [Cajanus Cajan (L.) Millsp.]

scientific article published in 2017

Breeding pigeonpea cultivars for intercropping: synthesis and strategies.

scientific article published in March 2018

Can genomics boost productivity of orphan crops?

scientific article published on December 2012

Can genomics deliver climate-change ready crops?

scientific article published in October 2018

Candidate gene analysis for determinacy in pigeonpea (Cajanus spp.).

scientific article published on 21 October 2014

Carbohydrate, glutathione, and polyamine metabolism are central to Aspergillus flavus oxidative stress responses over time

article

Cell‐type proteomic and metabolomic resolution of early and late grain filling stages of wheat endosperm

scientific article published on 4 December 2023

Characterization and mapping of Dt1 locus which co-segregates with CcTFL1 for growth habit in pigeonpea

scientific article published on 24 May 2017

Characterization of ASR gene and its role in drought tolerance in chickpea (Cicer arietinum L.).

scientific article published on 14 July 2020

Characterization of microsatellites and development of chromosome specific STMS markers in bread wheat

article

Characterization of ‘<i>QTL-hotspot</i>’ introgression lines reveals physiological mechanisms and candidate genes associated with drought adaptation in chickpea

scientific article published in 2022

CicArMiSatDB: the chickpea microsatellite database

scientific article published on 21 June 2014

CicArVarDB: SNP and InDel database for advancing genetics research and breeding applications in chickpea

scientific article published on 19 August 2015

Co-localization of major quantitative trait loci for pod size and weight to a 3.7 cM interval on chromosome A05 in cultivated peanut (Arachis hypogaea L.).

scientific article

Comparative Root Transcriptomics Provide Insights into Drought Adaptation Strategies in Chickpea (Cicer arietinum L.).

scientific article published on 05 March 2020

Comparative analysis of expressed sequence tags (ESTs) between drought-tolerant and -susceptible genotypes of chickpea under terminal drought stress

scientific article published on 22 April 2011

Comparative analysis of the grain proteome fraction in barley genotypes with contrasting salinity tolerance during germination

scientific article published on 11 November 2009

Comparative genomics and prediction of conditionally dispensable sequences in legume-infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors.

scientific article published on 5 March 2016

Comparative transcriptome analysis of aerial and subterranean pods development provides insights into seed abortion in peanut

scientific article published on 5 May 2014

Comprehensive analysis and identification of drought-responsive candidate NAC genes in three semi-arid tropics (SAT) legume crops

scientific article published on 21 April 2021

Comprehensive tissue-specific proteome analysis of drought stress responses in Pennisetum glaucum (L.) R. Br. (Pearl millet).

scientific article

Comprehensive transcriptome assembly of Chickpea (Cicer arietinum L.) using sanger and next generation sequencing platforms: development and applications

scientific article published on 23 January 2014

Construction and comparison of three reference-quality genome assemblies for soybean

scientific article published on 28 October 2019

Construction of a high-density genetic map and QTL analysis for yield, yield components and agronomic traits in chickpea (Cicer arietinum L.)

scientific article published in 2021

Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea

scientific article published on 15 May 2017

Corrigendum: Genome Sequencing and Analysis of the Peanut B-Genome Progenitor ()

scientific article published in 2018

Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome

scientific article

Crop Breeding Chips and Genotyping Platforms: Progress, Challenges, and Perspectives

scientific article published on 29 June 2017

Current state-of-art of sequencing technologies for plant genomics research

scientific article published on January 2012

Cytoplasmic male sterility-associated chimeric open reading frames identified by mitochondrial genome sequencing of four Cajanus genotypes

scientific article published on 20 June 2013

Deciphering Transcriptional Programming during Pod and Seed Development Using RNA-Seq in Pigeonpea (Cajanus cajan)

scientific article published on 19 October 2016

Deciphering the genetic basis of root morphology, nutrient uptake, yield, and yield-related traits in rice under dry direct-seeded cultivation systems

scientific article published on 27 June 2019

Deep sequencing analysis of the transcriptomes of peanut aerial and subterranean young pods identifies candidate genes related to early embryo abortion

scientific article published on 6 November 2012

Defining the transcriptome assembly and its use for genome dynamics and transcriptome profiling studies in pigeonpea (Cajanus cajan L.). ⬇️

scientific article

Development and Evaluation of a High Density Genotyping 'Axiom_Arachis' Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut

scientific article published on 16 January 2017

Development and characterization of BAC-end sequence derived SSRs, and their incorporation into a new higher density genetic map for cultivated peanut (Arachis hypogaea L.).

scientific article published on 19 January 2012

Development and deployment of a high-density linkage map identified quantitative trait loci for plant height in peanut (Arachis hypogaea L.).

scientific article published on 20 December 2016

Development and evaluation of high-density Axiom® CicerSNP Array for high-resolution genetic mapping and breeding applications in chickpea

scientific article published on 15 September 2017

Development and implementation of high-throughput SNP genotyping in barley

scientific article published on 4 December 2009

Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.).

scientific article

Development of AhMITE1 markers through genome-wide analysis in peanut (Arachis hypogaea L.).

scientific article published on 8 January 2018

Development of DArT markers and assessment of diversity in Fusarium oxysporum f. sp. ciceris, wilt pathogen of chickpea (Cicer arietinum L.).

scientific article published on 10 June 2014

Development of a High-Density Linkage Map and Tagging Leaf Spot Resistance in Pearl Millet Using Genotyping-by-Sequencing Markers

scientific article

Development of a dense genetic map and QTL analysis for pod borer Helicoverpa armigera (Hübner) resistance component traits in chickpea (Cicer arietinum L.).

scientific article published on 01 December 2020

Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh].

scientific article published on 20 January 2011

Differences between Cajanus cajan (L.) Millspaugh and C. cajanifolius (Haines) van der Maesen, the progenitor species of pigeonpea

scientific article published on 19 April 2011

Differential Regulation of Genes Involved in Root Morphogenesis and Cell Wall Modification is Associated with Salinity Tolerance in Chickpea.

scientific article published on 19 March 2018

Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage

scientific article published on 26 June 2009

Discovery of Major Quantitative Trait Loci and Candidate Genes for Fresh Seed Dormancy in Groundnut

scientific article published in 2022

Discovery of Putative Herbicide Resistance Genes and Its Regulatory Network in Chickpea Using Transcriptome Sequencing

scientific article published on 7 June 2017

Discovery of genomic regions and candidate genes controlling shelling percentage using QTL-seq approach in cultivated peanut (Arachis hypogaea L.).

scientific article published on 30 January 2019

Dissecting genomic hotspots underlying seed protein, oil, and sucrose content in an interspecific mapping population of soybean using high-density linkage mapping

scientific article published on 16 May 2018

Dissection of the barley 2L1.0 region carrying the 'Laevigatum' quantitative resistance gene to leaf rust using near-isogenic lines (NIL) and subNIL

scientific article published in December 2007

Draft Genome Report of Bacillus altitudinis SORB11, Isolated from the Indian Sector of the Southern Ocean

scientific article published on 08 June 2017

Draft genome of the peanut A-genome progenitor (Arachis duranensis) provides insights into geocarpy, oil biosynthesis, and allergens

scientific article published on 31 May 2016

Draft genome sequence of adzuki bean, Vigna angularis

scientific article published on 28 January 2015

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

scientific article published on 27 January 2013

Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers

scientific article

EST-derived single nucleotide polymorphism markers for assembling genetic and physical maps of the barley genome

scientific article published on 30 October 2007

Editorial

scientific article published on 24 October 2012

Effect of terminal heat stress on osmolyte accumulation and gene expression during grain filling in bread wheat (<i>Triticum aestivum</i> L.)

scientific article published in 2023

Emerging Genomic Tools for Legume Breeding: Current Status and Future Prospects

scientific article published in 2016

Engineering plants using diverse CRISPR-associated proteins and deregulation of genome-edited crops

scientific article published in May 2024

Epigenetics and epigenomics: underlying mechanisms, relevance, and implications in crop improvement

scientific article published on 21 October 2020

Epistatic interactions of major effect drought QTLs with genetic background loci determine grain yield of rice under drought stress

scientific article published on 22 February 2019

Evaluation and validation of housekeeping genes as reference for gene expression studies in pigeonpea (Cajanus cajan) under drought stress conditions

scientific article published on 7 April 2015

Evaluation of Streptomyces strains isolated from herbal vermicompost for their plant growth-promotion traits in rice

scientific article published on 19 September 2013

Exciting journey of 10 years from genomes to fields and markets: Some success stories of genomics-assisted breeding in chickpea, pigeonpea and groundnut

scientific article published in January 2016

Exploring genetic variation for salinity tolerance in chickpea using image-based phenotyping

scientific article published on 2 May 2017

Exploring germplasm diversity to understand the domestication process in Cicer spp. using SNP and DArT markers

scientific article

Exploring plant growth-promotion actinomycetes from vermicompost and rhizosphere soil for yield enhancement in chickpea

scientific article published on 27 January 2016

Fine mapping and gene cloning in the post-NGS era: advances and prospects

scientific article published on 10 February 2020

First-generation HapMap in Cajanus spp. reveals untapped variations in parental lines of mapping populations

scientific article published on 29 January 2016

Food Legumes and Rising Temperatures: Effects, Adaptive Functional Mechanisms Specific to Reproductive Growth Stage and Strategies to Improve Heat Tolerance

scientific article published on 4 October 2017

From Mendel's discovery on pea to today's plant genetics and breeding : Commemorating the 150th anniversary of the reading of Mendel's discovery

scientific article

From genome studies to agricultural biotechnology: closing the gap between basic plant science and applied agriculture

scientific article published in April 2010

Gene Expression and Yeast Two-Hybrid Studies of 1R-MYB Transcription Factor Mediating Drought Stress Response in Chickpea (Cicer arietinum L.).

scientific article published on 24 December 2015

Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation

scientific article published on 23 February 2017

Gene-Based Marker Systems in Plants: High Throughput Approaches for Marker Discovery and Genotyping

scientific article published on 12 October 2009

Gene/QTL discovery for Anthracnose in common bean (Phaseolus vulgaris L.) from North-western Himalayas

scientific article published in February 2018

Genetic Dissection and Identification of Candidate Genes for Salinity Tolerance Using Axiom®CicerSNP Array in Chickpea

scientific article published on 17 July 2020

Genetic Dissection of Novel QTLs for Resistance to Leaf Spots and Tomato Spotted Wilt Virus in Peanut (Arachis hypogaea L.)

scientific article (publication date: 2017)

Genetic Diversity of Root System Architecture in Response to Drought Stress in Grain Legumes

scientific article published on 7 March 2018

Genetic Variation and Association Mapping of Seed-Related Traits in Cultivated Peanut (Arachis hypogaea L.) Using Single-Locus Simple Sequence Repeat Markers

scientific article published on 11 December 2017

Genetic dissection of drought and heat tolerance in chickpea through genome-wide and candidate gene-based association mapping approaches

scientific article published on 6 May 2014

Genetic dissection of drought tolerance in chickpea (Cicer arietinum L.).

scientific article published on 11 December 2013

Genetic diversity and demographic history of Cajanus spp. illustrated from genome-wide SNPs

scientific article

Genetic imprints of domestication for disease resistance, oil quality, and yield component traits in groundnut (Arachis hypogaea L.).

scientific article published on 22 November 2018

Genetic mapping and BAC assignment of EST-derived SSR markers shows non-uniform distribution of genes in the barley genome.

scientific article published in June 2006

Genetic mapping identified major main‐effect and three co‐localized quantitative trait loci controlling high iron and zinc content in groundnut

scientific article published in 2023

Genetic mapping of QTLs controlling fatty acids provided insights into the genetic control of fatty acid synthesis pathway in peanut (Arachis hypogaea L.).

scientific article published on 7 April 2015

Genetic molecular markers to accelerate genetic gains in crops

scientific article published on 27 May 2020

Genetic patterns of domestication in pigeonpea (Cajanus cajan (L.) Millsp.) and wild Cajanus relatives.

scientific article published on 22 June 2012

Genetic relationships among seven sections of genus Arachis studied by using SSR markers

scientific article

Genetic resources and genes/QTLs for gram pod borer (<i>Helicoverpa armigera</i> Hübner) resistance in chickpea from the Western Himalayas

scientific article published on 4 July 2024

Genetic structure and ecological niche space of lentil's closest wild relative, <i>Lens orientalis</i> (Boiss.) Schmalh.

scientific article published on 17 January 2024

Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.).

scientific article

Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing

publication published on 08 February 2021

Genetic variations of HvP5CS1 and their association with drought tolerance related traits in barley (Hordeum vulgare L.).

scientific article published on 11 August 2017

Genetics of ascochyta blight resistance in chickpea

scientific article published on 3 September 2009

Genetics, genomics and breeding of groundnut (Arachis hypogaea L.).

scientific article published on 29 August 2018

Genic microsatellite markers in plants: features and applications

scientific article published in January 2005

Genome Sequencing and Analysis of the Peanut B-Genome Progenitor (Arachis ipaensis).

scientific article

Genome sequence of Jatropha curcas L., a non-edible biodiesel plant, provides a resource to improve seed-related traits

scientific article published on 11 September 2018

Genome sequence of mungbean and insights into evolution within Vigna species

scientific article published on 11 November 2014

Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication

scientific article

Genome sequencing of the high oil crop sesame provides insight into oil biosynthesis

scientific article

Genome wide transcriptome profiling of Fusarium oxysporum f sp. ciceris conidial germination reveals new insights into infection-related genes

scientific article published on 17 November 2016

Genome-Enabled Prediction Models for Yield Related Traits in Chickpea

scientific article published on 22 November 2016

Genome-Wide Discovery and Deployment of Insertions and Deletions Markers Provided Greater Insights on Species, Genomes, and Sections Relationships in the Genus Arachis

scientific article published on 19 December 2017

Genome-Wide Discovery of Microsatellite Markers from Diploid Progenitor Species, Arachis duranensis and A. ipaensis, and Their Application in Cultivated Peanut (A. hypogaea).

scientific article published on 18 July 2017

Genome-Wide Identification and Analysis of Arabidopsis Sodium Proton Antiporter (NHX) and Human Sodium Proton Exchanger (NHE) Homologs in Sorghum bicolor.

scientific article published on 3 May 2018

Genome-Wide Identification and Analysis of the Hsp40/J-Protein Family Reveals Its Role in Soybean (Glycine max) Growth and Development

scientific article published in 2023

Genome-Wide Identification, Characterization, and Expression Analysis of Small RNA Biogenesis Purveyors Reveal Their Role in Regulation of Biotic Stress Responses in Three Legume Crops

scientific article published on 25 April 2017

Genome-based analysis of the transcriptome from mature chickpea root nodules

scientific article published on 11 July 2014

Genome-based trait prediction in multi- environment breeding trials in groundnut

scientific article published in 2020

Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut

scientific article published on 16 December 2016

Genome-wide analysis of epigenetic and transcriptional changes associated with heterosis in pigeonpea

scientific article published on 10 January 2020

Genome-wide association study reveals significant genomic regions for improving yield, adaptability of rice under dry direct seeded cultivation condition.

scientific article

Genome-wide dissection of AP2/ERF and HSP90 gene families in five legumes and expression profiles in chickpea and pigeonpea

scientific article published on 23 January 2016

Genome-wide expression quantitative trait locus analysis in a recombinant inbred line population for trait dissection in peanut

scientific article published on 17 September 2019

Genome-wide sequencing of longan (Dimocarpus longan Lour.) provides insights into molecular basis of its polyphenol-rich characteristics

scientific article

Genome-wide transcriptome and physiological analyses provide new insights into peanut drought response mechanisms

scientific article published on 05 March 2020

Genomewide association studies for 50 agronomic traits in peanut using the 'reference set' comprising 300 genotypes from 48 countries of the semi-arid tropics of the world

scientific article published on 20 August 2014

Genomic Tools in Groundnut Breeding Program: Status and Perspectives

scientific article published in 2016

Genomic approaches to enhance adaptive plasticity to cope with soil constraints amidst climate change in wheat

scientific article published in 2023

Genomic interventions for sustainable agriculture

scientific article published on 02 September 2020

Genomic-enabled prediction models using multi-environment trials to estimate the effect of genotype × environment interaction on prediction accuracy in chickpea

scientific article published in Scientific Reports

Genomics and breeding innovations for enhancing genetic gain for climate resilience and nutrition traits

scientific article published in 2021

Genomics for greater efficiency in pigeonpea hybrid breeding

scientific article published in 2015

Genomics, genetics and breeding of tropical legumes for better livelihoods of smallholder farmers

scientific article published on 17 April 2018

Genomics-assisted breeding for boosting crop improvement in pigeonpea (Cajanus cajan)

scientific article

Genomics-assisted breeding for crop improvement

scientific article published in December 2005

Genomics-assisted breeding in four major pulse crops of developing countries: present status and prospects

scientific article

Genotyping-by-sequencing and multilocation evaluation of two interspecific backcross populations identify QTLs for yield-related traits in pigeonpea

scientific article published on 16 December 2019

Genotyping-by-sequencing based genetic mapping reveals large number of epistatic interactions for stem rot resistance in groundnut

scientific article published on 11 December 2018

Genotyping-by-sequencing based intra-specific genetic map refines a ''QTL-hotspot" region for drought tolerance in chickpea

scientific article published on 25 October 2014

Genotyping-by-sequencing of three mapping populations for identification of candidate genomic regions for resistance to sterility mosaic disease in pigeonpea

scientific article published on 12 May 2017

Global agricultural intensification during climate change: a role for genomics

scientific article published in April 2016

Groundnut improvement: use of genetic and genomic tools

scientific article published on 25 February 2013

Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains

scientific article published on 15 February 2019

Harvesting the promising fruits of genomics: applying genome sequencing technologies to crop breeding

scientific article published on 10 June 2014

High resolution mapping of restoration of fertility (Rf) by combining large population and high density genetic map in pigeonpea [Cajanus cajan (L.) Millsp]

scientific article published on 03 July 2020

High throughput sequencing of small RNA component of leaves and inflorescence revealed conserved and novel miRNAs as well as phasiRNA loci in chickpea.

scientific article published on 9 March 2015

High-density genetic map using whole-genome re-sequencing for fine mapping and candidate gene discovery for disease resistance in peanut.

scientific article published on 10 April 2018

High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus

scientific article published on 10 March 2015

Hoechst 33342 induced reactive oxygen species and impaired expression of cytochrome c oxidase subunit 1 leading to cell death in irradiated human cancer cells ⬇️

scientific article published on March 8, 2011

ICPH 2671 - the world's first commercial food legume hybrid

scientific article published in March 2013

Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq

scientific article published on 19 July 2016

Identification and Evaluation of Single-Nucleotide Polymorphisms in Allotetraploid Peanut (Arachis hypogaea L.) Based on Amplicon Sequencing Combined with High Resolution Melting (HRM) Analysis

scientific article published on 2 December 2015

Identification and Validation of Selected Universal Stress Protein Domain Containing Drought-Responsive Genes in Pigeonpea (Cajanus cajan L.).

scientific article published on January 2015

Identification and characterization of toxigenic fusaria associated with sorghum grain mold complex in India

scientific article

Identification of ERF genes in peanuts and functional analysis of AhERF008 and AhERF019 in abiotic stress response

scientific article published on 6 June 2014

Identification of Two Novel Peanut Genotypes Resistant to Aflatoxin Production and Their SNP Markers Associated with Resistance

scientific article published on 01 March 2020

Identification of candidate genome regions controlling disease resistance in Arachis

scientific article published on 22 August 2009

Identification of expressed resistance gene analogs from peanut (Arachis hypogaea L.) expressed sequence tags.

scientific article published on 18 March 2013

Identification of heterotic groups in South-Asian-bred hybrid parents of pearl millet

scientific article published on 02 January 2020

Identification of low Ca(2+) stress-induced embryo apoptosis response genes in Arachis hypogaea by SSH-associated library lift (SSHaLL).

scientific article published on 16 June 2015

Identification of quantitative trait loci for yield and yield related traits in groundnut (Arachis hypogaea L.) under different water regimes in Niger and Senegal

scientific article

Identification of several small main-effect QTLs and a large number of epistatic QTLs for drought tolerance related traits in groundnut (Arachis hypogaea L.).

scientific article

Identification of two major quantitative trait locus for fresh seed dormancy using the diversity arrays technology and diversity arrays technology-seq based genetic map in Spanish-type peanuts

scientific article published on 12 April 2016

Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species

scientific article published on 18 November 2006

Improved Genetic Map Identified Major QTLs for Drought Tolerance- and Iron Deficiency Tolerance-Related Traits in Groundnut

scientific article published on 30 December 2020

Improving crop performance under drought - cross-fertilization of disciplines

scientific article

InDel markers: An extended marker resource for molecular breeding in chickpea

scientific article published on 18 March 2019

Indel-seq: a fast-forward genetics approach for identification of trait-associated putative candidate genomic regions and its application in pigeonpea (Cajanus cajan).

scientific article published on 27 December 2016

Integrated consensus map of cultivated peanut and wild relatives reveals structures of the A and B genomes of Arachis and divergence of the legume genomes

scientific article published on 12 January 2013

Integrated genomics, physiology and breeding approaches for improving drought tolerance in crops.

scientific article published on 14 June 2012

Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.).

scientific article published on 8 March 2014

Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea

scientific article published on 01 December 2018

Integrating genomics for chickpea improvement: achievements and opportunities

scientific article published on 06 April 2020

Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome

scientific article published on 23 January 2010

Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea).

scientific article published on 15 May 2008

Laboratory Information Management Software for genotyping workflows: applications in high throughput crop genotyping

scientific article published on 17 August 2006

Large-scale analysis of the barley transcriptome based on expressed sequence tags

scientific article published in October 2004

Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes

scientific article

Large-scale development of cost-effective single-nucleotide polymorphism marker assays for genetic mapping in pigeonpea and comparative mapping in legumes

scientific article published on 26 October 2012

Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa.

scientific article

MAGIC populations in crops: current status and future prospects.

scientific article published on 09 April 2015

MODEL PLANTS and CROP IMPROVEMENT

article

Maize and heat stress: Physiological, genetic, and molecular insights

scientific article published in 2023

Mapping QTL for resistance to botrytis grey mould in chickpea

scientific article published on 25 February 2011

Mapping Quantitative Trait Loci of Resistance to Tomato Spotted Wilt Virus and Leaf Spots in a Recombinant Inbred Line Population of Peanut (Arachis hypogaea L.) from SunOleic 97R and NC94022.

scientific article published on 18 July 2016

Mapping and identification of a Cicer arietinum NSP2 gene involved in nodulation pathway.

scientific article published on 19 November 2013

Marker-assisted introgression of a QTL region to improve rust resistance in three elite and popular varieties of peanut (Arachis hypogaea L.).

scientific article published on 14 June 2014

Marker-assisted introgression of resistance to fusarium wilt race 2 in Pusa 256, an elite cultivar of desi chickpea.

scientific article published in July 2017

Marker-trait association study for protein content in chickpea (Cicer arietinum L.).

scientific article published on June 2015

Metabolomics Intervention Towards Better Understanding of Plant Traits

scientific article published in 2021

Methodology: ssb-MASS: a single seed-based sampling strategy for marker-assisted selection in rice

scientific article published on 24 July 2019

Molecular Basis of Root Nodule Symbiosis between Bradyrhizobium and 'Crack-Entry' Legume Groundnut (Arachis hypogaea L.).

scientific article published on 20 February 2020

Molecular Mapping of Flowering Time Major Genes and QTLs in Chickpea (Cicer arietinum L.).

scientific article published on 6 July 2017

Molecular Mapping of Oil Content and Fatty Acids Using Dense Genetic Maps in Groundnut (Arachis hypogaea L.).

scientific article published on 22 May 2017

Molecular Mapping of QTLs for Heat Tolerance in Chickpea

scientific article published on 25 July 2018

Molecular and phenotypic diversity among chickpea (Cicer arietinum) genotypes as a function of drought tolerance

scientific article published in 2018

Molecular breeding for introgression of fatty acid desaturase mutant alleles (ahFAD2A and ahFAD2B) enhances oil quality in high and low oil containing peanut genotypes

scientific article published on 28 August 2015

Molecular genetics and genomics of abiotic stress responses

scientific article published on 21 August 2014

Molecular mapping and inheritance of restoration of fertility (Rf) in A4 hybrid system in pigeonpea (Cajanus cajan (L.) Millsp.)

scientific article published on 28 April 2018

Molecular mapping of QTLs for resistance to Fusarium wilt (race 1) and Ascochyta blight in chickpea (Cicer arietinum L.)

scientific article published on 21 June 2013

Molecular mechanisms, genetic mapping, and genome editing for insect pest resistance in field crops

scientific article published on 10 March 2022

Molecular plant breeding: methodology and achievements

scientific article published on January 2009

Monitoring Changes in the Cultivation of Pigeonpea and Groundnut in Malawi Using Time Series Satellite Imagery for Sustainable Food Systems

scientific article published on 21 June 2019

More genomic resources for less-studied crops

scientific article published on 6 August 2010

Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding

scientific article published on 03 July 2020

Multilocus variable number tandem repeat analysis as a tool to discern genetic relationships among strains of Yersinia enterocolitica biovar 1A.

scientific article published on 23 March 2009

Multiomics approach unravels fertility transition in a pigeonpea line for a two-line hybrid system

scientific article published on 18 June 2020

Multiple post-domestication origins of kabuli chickpea through allelic variation in a diversification-associated transcription factor.

scientific article published on 19 May 2016

NGS-QCbox and Raspberry for Parallel, Automated and Rapid Quality Control Analysis of Large-Scale Next Generation Sequencing (Illumina) Data

scientific article published on 13 October 2015

Neglecting legumes has compromised human health and sustainable food production ⬇️

scientific article

Nested-association mapping (NAM)-based genetic dissection uncovers candidate genes for seed and pod weights in peanut (Arachis hypogaea)

scientific article published on 05 December 2019

New Hypervariable SSR Markers for Diversity Analysis, Hybrid Purity Testing and Trait Mapping in Pigeonpea [Cajanus cajan (L.) Millspaugh].

scientific article published on 31 March 2017

Next generation breeding in pulses: Present status and future directions

scientific article published in 2021

Next-generation sequencing for identification of candidate genes for Fusarium wilt and sterility mosaic disease in pigeonpea (Cajanus cajan).

scientific article published on 23 September 2015

Next-generation sequencing identified genomic region and diagnostic markers for resistance to bacterial wilt on chromosome B02 in peanut (Arachis hypogaea L.).

scientific article published on 31 May 2019

Next-generation sequencing technologies and their implications for crop genetics and breeding

scientific article published on 11 August 2009

Next-generation sequencing technologies: opportunities and obligations in plant genomics

scientific article published in January 2012

Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.)

scientific article published in 2011

Orphan legume crops enter the genomics era!

scientific article published on 20 January 2009

Overexpression of a Plasma Membrane Bound Na+/H+ Antiporter-Like Protein (SbNHXLP) Confers Salt Tolerance and Improves Fruit Yield in Tomato by Maintaining Ion Homeostasis

scientific article published on January 2016

Oxidative stress and carbon metabolism influence Aspergillus flavus transcriptome composition and secondary metabolite production

scientific article published on 12 December 2016

Pearl millet [Pennisetum glaucum (L.) R. Br.] consensus linkage map constructed using four RIL mapping populations and newly developed EST-SSRs

scientific article

Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments.

scientific article

Perl module and PISE wrappers for the integrated analysis of sequence data and SNP features

scientific article

Phenotypic Data from Inbred Parents Can Improve Genomic Prediction in Pearl Millet Hybrids.

scientific article

Phenotyping chickpeas and pigeonpeas for adaptation to drought.

scientific article

Phylogenetic diversity of Mesorhizobium in chickpea

scientific article published on June 2014

Physiological, molecular, and environmental insights into plant nitrogen uptake, and metabolism under abiotic stresses

scientific article published on 26 May 2024

Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.).

scientific article

Plant Genetics and Molecular Biology: An Introduction

scientific article published on 16 February 2018

Plant vigour QTLs co-map with an earlier reported QTL hotspot for drought tolerance while water saving QTLs map in other regions of the chickpea genome.

scientific article published on 6 February 2018

Potential of promotion of alleles by genome editing to improve quantitative traits in livestock breeding programs.

scientific article published on 2 July 2015

Pre-breeding for diversification of primary gene pool and genetic enhancement of grain legumes

scientific article published on 20 August 2013

Prioritization of candidate genes in "QTL-hotspot" region for drought tolerance in chickpea (Cicer arietinum L.).

scientific article published on 19 October 2015

Progress in the utilization ofCajanus platycarpus(Benth.) Maesen in pigeonpea improvement

scientific article published on 31 May 2011

Progress in understanding drought tolerance: from alleles to cropping systems.

scientific article published in June 2018

Proline over-accumulation alleviates salt stress and protects photosynthetic and antioxidant enzyme activities in transgenic sorghum [Sorghum bicolor (L.) Moench].

scientific article published on 30 May 2015

Prospects for developing allergen‐depleted food crops

scientific article published in 2023

Proteome analysis of Aspergillus flavus isolate-specific responses to oxidative stress in relationship to aflatoxin production capability

scientific article published on 21 February 2018

Proteomics and Metabolomics: Two Emerging Areas for Legume Improvement

scientific article published in 2015

QTL-seq approach identified genomic regions and diagnostic markers for rust and late leaf spot resistance in groundnut (Arachis hypogaea L.).

scientific article published on 27 December 2016

QTL-seq for rapid identification of candidate genes for 100-seed weight and root/total plant dry weight ratio under rainfed conditions in chickpea

scientific article published on 23 April 2016

QTL-seq for the identification of candidate genes for days to flowering and leaf shape in pigeonpea

scientific article published on 12 January 2022

Quantitative trait locus analysis and construction of consensus genetic map for drought tolerance traits based on three recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.) ⬇️

scientific article published on November 22, 2011

Quantitative trait locus analysis and construction of consensus genetic map for foliar disease resistance based on two recombinant inbred line populations in cultivated groundnut (Arachis hypogaea L.).

scientific article

RNA-Seq analysis revealed genes associated with drought stress response in kabuli chickpea (Cicer arietinum L.).

scientific article published on 28 June 2018

Radiosensitization by 2-deoxy-D-glucose and 6-aminonicotinamide involves activation of redox sensitive ASK1-JNK/p38MAPK signaling in head and neck cancer cells.

scientific article

Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.).

scientific article published on 16 December 2016

Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties

scholarly article

Reply to: Evaluating two different models of peanut's origin

scientific article published on 11 May 2020

Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits

scientific article published on 29 April 2019

Responses of Aspergillus flavus to Oxidative Stress Are Related to Fungal Development Regulator, Antioxidant Enzyme, and Secondary Metabolite Biosynthetic Gene Expression

scientific article published on 21 December 2016

Root exudation of contrasting drought-stressed pearl millet genotypes conveys varying biological nitrification inhibition (BNI) activity

scientific article published on 09 July 2021

Root traits confer grain yield advantages under terminal drought in chickpea (Cicer arietinum L.).

scientific article published on February 2017

SSR markers associated to early leaf spot disease resistance through selective genotyping and single marker analysis in groundnut (Arachis hypogaea L.).

scientific article published on 10 August 2017

Salt sensitivity in chickpea.

scientific article published on 14 October 2009

Selection and Validation of Housekeeping Genes as Reference for Gene Expression Studies in Pigeonpea (Cajanus cajan) under Heat and Salt Stress Conditions.

scientific article published on 21 December 2015

Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.).

scientific article published on October 2016

Single feature polymorphisms (SFPs) for drought tolerance in pigeonpea (Cajanus spp.).

scientific article published on 06 May 2011

Single nucleotide polymorphisms in HSP17.8 and their association with agronomic traits in barley

scientific article

Single nucleotide polymorphisms in rye (Secale cereale L.): discovery, frequency, and applications for genome mapping and diversity studies

scientific article published on 8 March 2007

Soybean Transporter Database (SoyTD): A comprehensive database for identification and exploration of natural variants in soybean transporter genes

scientific article published on 24 November 2020

Super Annigeri 1 and improved JG 74: two Fusarium wilt-resistant introgression lines developed using marker-assisted backcrossing approach in chickpea ( L.)

scientific article published on 28 December 2018

Surveying the genome and constructing a high-density genetic map of napiergrass (Cenchrus purpureus Schumach)

scientific article published in Scientific Reports

Systems biology for crop improvement

scientific article published in 2021

Technological perspectives for plant breeding

scientific article published on 19 March 2019

Temperature‐smart plants: A new horizon with omics‐driven plant breeding

scientific article published in 2024

The CarERF genes in chickpea (Cicer arietinum L.) and the identification of CarERF116 as abiotic stress responsive transcription factor.

scientific article

The Celery Genome Sequence Reveals Sequential Paleo-Polyploidizations, Karyotype Evolution, and Resistance Gene Reduction in Apiales

scientific article published on 23 October 2020

The INCREASE project: Intelligent Collections of food‐legume genetic resources for European agrofood systems

scientific article published in 2021

The RNA-Seq-based high resolution gene expression atlas of chickpea (Cicer arietinum L.) reveals dynamic spatio-temporal changes associated with growth and development

scientific article published on 16 May 2018

The Role of Vegetables and Legumes in Assuring Food, Nutrition, and Income Security for Vulnerable Groups in Sub-Saharan Africa

scientific article published in September 2015

The extent of grain yield and plant growth enhancement by plant growth-promoting broad-spectrum Streptomyces sp. in chickpea

scientific article published on 23 January 2015

The first SSR-based genetic linkage map for cultivated groundnut (Arachis hypogaea L.).

scientific article published on 2 December 2008

The first genetic map of pigeon pea based on diversity arrays technology (DArT) markers

scientific article published in April 2011

The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.).

scientific article published on 11 March 2010

The genetics of vigour-related traits in chickpea (Cicer arietinum L.): insights from genomic data

scientific article published in 2021

The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication

scientific article published on 01 May 2019

The genome sequence of segmental allotetraploid peanut Arachis hypogaea

scientific article published on 01 May 2019

The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut

scientific article

Toward the sequence-based breeding in legumes in the post-genome sequencing era.

scientific article published on 17 December 2018

Trait associations in the pangenome of pigeon pea (Cajanus cajan)

scientific article published on 05 February 2020

Transcriptome Analysis Identified Coordinated Control of Key Pathways Regulating Cellular Physiology and Metabolism upon <i>Aspergillus flavus</i> Infection Resulting in Reduced Aflatoxin Production in Groundnut

scientific article published on 16 December 2020

Transcriptome Analysis of a New Peanut Seed Coat Mutant for the Physiological Regulatory Mechanism Involved in Seed Coat Cracking and Pigmentation

scientific article published on 14 October 2016

Transcriptome analyses reveal genotype- and developmental stage-specific molecular responses to drought and salinity stresses in chickpea

scientific article published on 13 January 2016

Transcriptome profiling reveals the expression and regulation of genes associated with Fusarium wilt resistance in chickpea (<i>Cicer arietinum</i> L.)

scientific article published in 2023

Transcriptomics, proteomics, and metabolomics interventions prompt crop improvement against metal(loid) toxicity

scientific article published in 2024

Transferability and polymorphism of barley EST-SSR markers used for phylogenetic analysis in Hordeum chilense

scientific article

Two key genomic regions harbour QTLs for salinity tolerance in ICCV 2 × JG 11 derived chickpea (Cicer arietinum L.) recombinant inbred lines.

scientific article published on 22 May 2015

Understanding sheath blight resistance in rice: the road behind and the road ahead

scientific article published on 29 January 2020

Unique regulatory network of dragon fruit simultaneously mitigates the effect of vanadium pollutant and environmental factors

scientific article published in July 2024

Unlocking plant genetics with telomere-to-telomere genome assemblies

scientific article published on 24 July 2024

Unraveling candidate genomic regions responsible for delayed leaf senescence in rice

scientific article published on 15 October 2020

Whole genome re-sequencing reveals genome-wide variations among parental lines of 16 mapping populations in chickpea (Cicer arietinum L.).

scientific article published on 27 January 2016

Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits

scientific article published on 22 May 2017

Whole-genome resequencing-based QTL-seq identified candidate genes and molecular markers for fresh seed dormancy in groundnut

scientific article published on 20 October 2019

Whole-genome scanning for mapping determinacy in Pigeonpea (Cajanusspp.)

scientific article published in August 2012

Wildsoydb DataHub: a platform for accessing soybean multiomic datasets across multiple reference genomes

scientific article published in 2022

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