List of works - Ramin Homayouni

A gain-of-function mutation in the transcription factor Upc2p causes upregulation of ergosterol biosynthesis genes and increased fluconazole resistance in a clinical Candida albicans isolate.

scientific article published on 16 May 2008

A systematic study on latent semantic analysis model parameters for mining biomedical literature

Blood gene expression profiling in liver transplant recipients with hepatitis C virus and posttransplantation diabetes mellitus

scientific article published on December 2006

CbGRiTS: cerebellar gene regulation in time and space.

scientific article published on 23 October 2014

ColonyTrak: a web tool and database system for managing experimental animal models

Combining gene expression QTL mapping and phenotypic spectrum analysis to uncover gene regulatory relationships.

scientific article published on 12 June 2006

Coordinated regulation of Rel expression by MAP3K4, CBP, and HDAC6 controls phenotypic switching

scientific article published on 28 August 2020

Dab2IP GTPase activating protein regulates dendrite development and synapse number in cerebellum

scientific article

Dab2IP Regulates Neuronal Positioning, Rap1 Activity and Integrin Signaling in the Developing Cortex

scientific article

Dab2ip regulates neuronal migration and neurite outgrowth in the developing neocortex

scientific journal article

Developing a gene expression model for predicting ventilator-associated pneumonia in trauma patients: a pilot study

scientific article

Development of the InCharge Health Mobile App to Improve Adherence to Hydroxyurea in Patients With Sickle Cell Disease: User-Centered Design Approach

scientific article published on 08 May 2020

Disabled-1 interacts with a novel developmentally regulated protocadherin

scientific journal article

Discovering gene functional relationships using FAUN (Feature Annotation Using Nonnegative matrix factorization).

scientific article

Dynamics of protein phosphorylation in sensory neurons of Aplysia

scientific article published on 01 January 1995

Expression levels of obesity-related genes are associated with weight change in kidney transplant recipients

scientific article published on 27 March 2013

Expression of mouse Dab2ip transcript variants and gene methylation during brain development.

scientific article published on 7 May 2015

Functionally enigmatic genes: a case study of the brain ignorome.

scientific article

Gene clustering by latent semantic indexing of MEDLINE abstracts.

scientific article

Gene tree labeling using nonnegative matrix factorization on biomedical literature

scientific article published on January 2008

Genome-wide expression and location analyses of the Candida albicans Tac1p regulon.

scientific article

Glutamate dysfunction associated with developmental cerebellar damage: relevance to autism spectrum disorders

scientific article

Group A streptococcus expresses a trio of surface proteins containing protective epitopes

scientific article

Identification of specific mRNAs affected by treatments producing long-term facilitation in Aplysia

scientific article published on 01 March 1998

Interaction of a novel mitochondrial protein, 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (NIPSNAP1), with the amyloid precursor protein family

scientific journal article

LSI based framework to predict gene regulatory information

Latent Semantic Indexing of PubMed abstracts for identification of transcription factor candidates from microarray derived gene sets.

scientific article

Literature aided determination of data quality and statistical significance threshold for gene expression studies ⬇️

scientific article published on December 17, 2012

Murine central and peripheral nervous system transcriptomes: comparative gene expression.

scientific article

NFkappaB negatively regulates interferon-induced gene expression and anti-influenza activity.

scientific article published on 03 March 2006

Octamer-primed cycle sequencing: design of an optimized primer library.

scientific article published on June 1996

Pdr1 regulates multidrug resistance in Candida glabrata: gene disruption and genome-wide expression studies.

scientific article published on 27 June 2006

Role of nuclear factor-kappaB in the antiviral action of interferon and interferon-regulated gene expression.

scientific article

Slim-Prim: an integrated data system for clinical and translational research.

scientific article

Stabilization of ubiquitous mitochondrial creatine kinase preprotein by APP family proteins.

scientific article published on 2 November 2005

System dynamics modeling of childhood obesity

scientific article published on 31 July 2012

Tetraspanin CD9 modulates human lymphoma cellular proliferation via histone deacetylase activity.

scientific article published on 18 April 2014

The transcription factor Mrr1p controls expression of the MDR1 efflux pump and mediates multidrug resistance in Candida albicans

scientific article

Using gene expression databases for classical trait QTL candidate gene discovery in the BXD recombinant inbred genetic reference population: mouse forebrain weight

scientific article

List of works by Ramin Homayouni

A gain-of-function mutation in the transcription factor Upc2p causes upregulation of ergosterol biosynthesis genes and increased fluconazole resistance in a clinical Candida albicans isolate.

A systematic study on latent semantic analysis model parameters for mining biomedical literature

Blood gene expression profiling in liver transplant recipients with hepatitis C virus and posttransplantation diabetes mellitus

CbGRiTS: cerebellar gene regulation in time and space.

ColonyTrak: a web tool and database system for managing experimental animal models

Combining gene expression QTL mapping and phenotypic spectrum analysis to uncover gene regulatory relationships.

Coordinated regulation of Rel expression by MAP3K4, CBP, and HDAC6 controls phenotypic switching

Dab2IP GTPase activating protein regulates dendrite development and synapse number in cerebellum

Dab2IP Regulates Neuronal Positioning, Rap1 Activity and Integrin Signaling in the Developing Cortex

Dab2ip regulates neuronal migration and neurite outgrowth in the developing neocortex

Developing a gene expression model for predicting ventilator-associated pneumonia in trauma patients: a pilot study

Development of the InCharge Health Mobile App to Improve Adherence to Hydroxyurea in Patients With Sickle Cell Disease: User-Centered Design Approach

Disabled-1 interacts with a novel developmentally regulated protocadherin

Discovering gene functional relationships using FAUN (Feature Annotation Using Nonnegative matrix factorization).

Dynamics of protein phosphorylation in sensory neurons of Aplysia

Expression levels of obesity-related genes are associated with weight change in kidney transplant recipients

Expression of mouse Dab2ip transcript variants and gene methylation during brain development.

Functionally enigmatic genes: a case study of the brain ignorome.

Gene clustering by latent semantic indexing of MEDLINE abstracts.

Gene tree labeling using nonnegative matrix factorization on biomedical literature

Genome-wide expression and location analyses of the Candida albicans Tac1p regulon.

Glutamate dysfunction associated with developmental cerebellar damage: relevance to autism spectrum disorders

Group A streptococcus expresses a trio of surface proteins containing protective epitopes

Identification of specific mRNAs affected by treatments producing long-term facilitation in Aplysia

Interaction of a novel mitochondrial protein, 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (NIPSNAP1), with the amyloid precursor protein family

LSI based framework to predict gene regulatory information

Latent Semantic Indexing of PubMed abstracts for identification of transcription factor candidates from microarray derived gene sets.

Literature aided determination of data quality and statistical significance threshold for gene expression studies ⬇️

Murine central and peripheral nervous system transcriptomes: comparative gene expression.

NFkappaB negatively regulates interferon-induced gene expression and anti-influenza activity.

Octamer-primed cycle sequencing: design of an optimized primer library.

Pdr1 regulates multidrug resistance in Candida glabrata: gene disruption and genome-wide expression studies.

Role of nuclear factor-kappaB in the antiviral action of interferon and interferon-regulated gene expression.

Slim-Prim: an integrated data system for clinical and translational research.

Stabilization of ubiquitous mitochondrial creatine kinase preprotein by APP family proteins.

System dynamics modeling of childhood obesity

Tetraspanin CD9 modulates human lymphoma cellular proliferation via histone deacetylase activity.

The transcription factor Mrr1p controls expression of the MDR1 efflux pump and mediates multidrug resistance in Candida albicans

Using gene expression databases for classical trait QTL candidate gene discovery in the BXD recombinant inbred genetic reference population: mouse forebrain weight