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List of works by Brent M Znosko

A Computational Model for Predicting Experimental RNA Nearest-Neighbor Free Energy Rankings: Inosine•Uridine Pairs

scientific article

A Guanosine-Centric Mechanism for RNA Chaperone Function ⬇️

scientific article published on March 7, 2013

Analysis of secondary structural elements in human microRNA hairpin precursors

scientific article

Computational model for predicting experimental RNA and DNA nearest-neighbor free energy rankings

scientific article

Effect of intercalator substituent and nucleotide sequence on the stability of DNA- and RNA-naphthalimide complexes

scientific article published on 17 April 2015

Effect of sodium ions on RNA duplex stability

scientific article published on 09 October 2013

Effects of Non-Nearest Neighbors on the Thermodynamic Stability of RNA GNRA Hairpin Tetraloops ⬇️

scientific article published on March 8, 2012

Factors affecting thermodynamic stabilities of RNA 3 x 3 internal loops

scientific article published in October 2004

Improved Model for Predicting the Free Energy Contribution of Dinucleotide Bulges to RNA Duplex Stability

scientific article published on 19 August 2015

Improved model to predict the free energy contribution of trinucleotide bulges to RNA duplex stability

scientific article

Molecular recognition in purine-rich internal loops: thermodynamic, structural, and dynamic consequences of purine for adenine substitutions in 5'(rGGCAAGCCU)2

scientific article

NMR studies of DNA single strands and DNA:RNA hybrids with and without 1-propynylation at C5 of oligopyrimidines

scientific article (publication date: 21 May 2003)

Nearest neighbor parameters for inosine x uridine pairs in RNA duplexes

scientific article published on 23 March 2007

Nearest-neighbor parameters for 7-deaza-adenosine·uridine base pairs in RNA duplexes

scientific article published on 20 April 2016

Positional and Neighboring Base Pair Effects on the Thermodynamic Stability of RNA Single Mismatches ⬇️

scientific article published on September 21, 2010

RNA CoSSMos: Characterization of Secondary Structure Motifs--a searchable database of secondary structure motifs in RNA three-dimensional structures ⬇️

scientific article published on November 29, 2011

Sheared Aanti.Aanti base pairs in a destabilizing 2 x 2 internal loop: the NMR structure of 5'(rGGCAAGCCU)2

scientific article

Solution Structure of the HIV-1 Exon Splicing Silencer 3 ⬇️

scientific article published on November 29, 2011

Solution structure of an RNA internal loop with three consecutive sheared GA pairs

scientific article

Stability of RNA duplexes containing inosine·cytosine pairs

scientific article published in December 2018

Structural characterization of naturally occurring RNA single mismatches ⬇️

scientific article published on September 28, 2010

The loss of a hydrogen bond: Thermodynamic contributions of a non-standard nucleotide

scientific article

Thermodynamic Characterization of RNA 2 × 3 Nucleotide Internal Loops ⬇️

scientific article published on June 21, 2012

Thermodynamic Characterization of RNA Triloops ⬇️

scientific article published on October 26, 2010

Thermodynamic characterization and nearest neighbor parameters for RNA duplexes under molecular crowding conditions

Thermodynamic characterization of naturally occurring RNA single mismatches with G-U nearest neighbors

scientific article published on 29 August 2008

Thermodynamic characterization of naturally occurring RNA tetraloops

scientific article

Thermodynamic characterization of single mismatches found in naturally occurring RNA.

scientific article published on 24 October 2007

Thermodynamic characterization of tandem mismatches found in naturally occurring RNA

scientific article (publication date: August 2009)

Thermodynamic contribution and nearest-neighbor parameters of pseudouridine-adenosine base pairs in oligoribonucleotides

scientific article published on 23 September 2013

Thermodynamic parameters for an expanded nearest-neighbor model for the formation of RNA duplexes with single nucleotide bulges

scientific article published in August 2002

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