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List of works by Arndt von Haeseler

A SAGE based approach to human glomerular endothelium: defining the transcriptome, finding a novel molecule and highlighting endothelial diversity

scientific article

A human tissue screen identifies a regulator of ER secretion as a brain size determinant

scientific article published on 29 October 2020

A phylogenomic approach to resolve the arthropod tree of life

scientific article

ADAR2 induces reproducible changes in sequence and abundance of mature microRNAs in the mouse brain.

scientific article

Accuracy of phylogeny reconstruction methods combining overlapping gene data sets

scientific article

Advanced methylome analysis after bisulfite deep sequencing: an example in Arabidopsis.

scientific article

An exact algorithm for the geodesic distance between phylogenetic trees.

scientific article

Benefit-of-doubt (BOD) scoring: a sequencing-based method for SNP candidate assessment from high to medium read number data sets.

scientific article

Budgeted phylogenetic diversity on circular split systems

scientific article

Central control of fever and female body temperature by RANKL/RANK

scientific article

Combined transcriptome and proteome profiling reveals specific molecular brain signatures for sex, maturation and circalunar clock phase

scientific article published on 15 February 2019

Conserved pore-forming regions in polypeptide-transporting proteins

scientific article

Cooperation of multiple chromatin modifications can generate unanticipated stability of epigenetic States in Arabidopsis

scientific article (publication date: 2010)

Decisive data sets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects

scientific article (publication date: 2014)

Do we still need supertrees? ⬇️

scientific article published on February 27, 2012

EST sequencing of Onychophora and phylogenomic analysis of Metazoa

scientific article

FACT: functional annotation transfer between proteins with similar feature architectures

scientific article

Functional and phylogenetic properties of the pore-forming beta-barrel transporters of the Omp85 family

scientific article

Gene expression profiling for molecular distinction and characterization of laser captured primary lung cancers

scientific article

Genome-wide RNAi screen identifies genes involved in intestinal pathogenic bacterial infection

scientific article

HaMStR: profile hidden markov model based search for orthologs in ESTs

scientific article

HvrBase++: a phylogenetic database for primate species

scientific article

INVHOGEN: a database of homologous invertebrate genes

scientific article

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies

scientific article

Innate immune response to Streptococcus pyogenes depends on the combined activation of TLR13 and TLR2.

scientific article

Learning From an Artificial Neural Network in Phylogenetics

scientific article published on 10 January 2024

Loss of matK RNA editing in seed plant chloroplasts

scientific article

MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation

scientific article published on 2 February 2018

Maximum-likelihood analysis using TREE-PUZZLE.

scientific article

NGC: lossless and lossy compression of aligned high-throughput sequencing data ⬇️

scientific article published on October 12, 2012

NextGenMap: fast and accurate read mapping in highly polymorphic genomes

scientific article

Phylogenetic diversity within seconds

scientific article

RETRACTED: TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics

RETRACTED: scientific article

Recent origin and cultural reversion of a hunter-gatherer group

scientific article published on 22 February 2005

Rooted triple consensus and anomalous gene trees

scientific article

SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis

scientific article

Shortest triplet clustering: reconstructing large phylogenies using representative sets

scientific article

State-of the art methodologies dictate new standards for phylogenetic analysis

scientific article

Structure of the space of taboo-free sequences

scientific article published on 17 September 2020

TMT-Opsins differentially modulate medaka brain function in a context-dependent manner

scientific article published on 07 January 2021

TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing

scientific article (publication date: March 2002)

Taxon Selection under Split Diversity

scientific article

Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices

scientific article (publication date: November 2016)

Testing substitution models within a phylogenetic tree

scientific article

The Candida albicans Histone Acetyltransferase Hat1 Regulates Stress Resistance and Virulence via Distinct Chromatin Assembly Pathways

scientific article

The evolution of the ribosome biogenesis pathway from a yeast perspective

scientific article published on 14 November 2013

The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima ⬇️

scientific article

The genomic basis of circadian and circalunar timing adaptations in a midge

scientific article

Timing strains of the marine insect Clunio marinus diverged and persist with gene flow

scientific article published on 07 January 2021

TonB-dependent transporters and their occurrence in cyanobacteria

scientific article

TreeSnatcher plus: capturing phylogenetic trees from images

scientific article

TreeSnatcher: coding trees from images

scientific article

Ultrafast approximation for phylogenetic bootstrap

scientific article

Unexpected complexity of the Wnt gene family in a sea anemone

scientific article

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