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List of works by Mark Thomas

2000 years of parallel societies in Stone Age Central Europe

scientific article

50,000 years of genetic uniformity in the critically endangered Iberian lynx

scientific article

A 3,000-year-old Egyptian emmer wheat genome reveals dispersal and domestication history

scientific article published on 04 November 2019

A Y chromosome census of the British Isles

scientific article (publication date: 27 May 2003)

A conditional knockout resource for the genome-wide study of mouse gene function

scientific article

A genomic history of Aboriginal Australia

scientific article (publication date: 21 September 2016)

A method for avoiding mis-priming when sequencing with Dynabeads

scientific article

A new time-scale for ray-finned fish evolution

scientific article (publication date: 22 February 2007)

A novel polymorphism associated with lactose tolerance in Africa: multiple causes for lactase persistence?

scientific article published on 21 November 2006

A prospective study of catheter-related complications in HPN patients ⬇️

scientific article published on October 4, 2011

A recent bottleneck of Y chromosome diversity coincides with a global change in culture

scientific article

A worldwide correlation of lactase persistence phenotype and genotypes

scientific article

AIP mutation in pituitary adenomas in the 18th century and today

scientific article

Absence of the lactase-persistence-associated allele in early Neolithic Europeans

scientific article (publication date: 28 February 2007)

Accurate age estimation in small-scale societies

scientific article published on 10 July 2017

Adult measles in Auckland Hospital, 1991

scientific article published on 01 September 1992

An African American Paternal Lineage Adds an Extremely Ancient Root to the Human Y Chromosome Phylogenetic Tree

scientific article published in April 2013

An African American paternal lineage adds an extremely ancient root to the human Y chromosome phylogenetic tree

scientific article

An analysis of consanguinity and social structure within the UK Asian population using microsatellite data.

scientific article

An assessment of the long-term preservation of the DNA of a bacterial pathogen in ethanol-preserved archival material

Analgesia in fast-track paediatric cardiac patients☆ ⬇️

scientific article published on February 20, 2011

Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians

scientific article

Ancient West African foragers in the context of African population history

scientific article published on 22 January 2020

Ancient genomes indicate population replacement in Early Neolithic Britain

scientific article published on 15 April 2019

Ancient human genomes suggest three ancestral populations for present-day Europeans

scientific article

Ancient human genomes suggest three ancestral populations for present-day Europeans

Ancient hybridization and an Irish origin for the modern polar bear matriline

scientific article

Ancient urbanization predicts genetic resistance to tuberculosis

scientific article

Antibodies to conformational epitopes of soluble liver antigen define a severe form of autoimmune liver disease

scientific article published on 01 March 2002

Armenian Y chromosome haplotypes reveal strong regional structure within a single ethno-national group

scientific article (publication date: December 2001)

Assessing the effects of conservation treatments on short sequences of DNA in vitro

Author Correction: Ancient genomes indicate population replacement in Early Neolithic Britain

scientific article published on 01 June 2019

Author Correction: Dairying, diseases and the evolution of lactase persistence in Europe

correction of a scholarly article

Beyond multiregional and simple out-of-Africa models of human evolution

scientific article published on 01 October 2019

CYP1A2 is more variable than previously thought: a genomic biography of the gene behind the human drug-metabolizing enzyme

scientific article

Case against subclassification of type II autoimmune chronic active hepatitis

scientific article published in The Lancet

Characterization of hunter-gatherer networks and implications for cumulative culture

article

Collateral damage and CRISPR genome editing

scientific article published on 14 March 2019

Current perspectives and the future of domestication studies

scientific article (publication date: 22 April 2014)

Current status and new features of the Consensus Coding Sequence database

scientific article

DNA from ancient mammoth bones

scientific article (publication date: 4 August 1994)

Dairying, diseases and the evolution of lactase persistence in Europe

scientific article published on 27 July 2022

Detecting gene duplications in the human lineage

scientific article published in November 2010

Did Our Species Evolve in Subdivided Populations across Africa, and Why Does It Matter?

scientific article published in 2018

Diet and the frequency of the alanine:glyoxylate aminotransferase Pro11Leu polymorphism in different human populations

scientific article published on 5 October 2004

Direct estimates of natural selection in Iberia indicate calcium absorption was not the only driver of lactase persistence in Europe

scientific article

Direct evidence for positive selection of skin, hair, and eye pigmentation in Europeans during the last 5,000 y

scientific article (publication date: April 2014)

Disclosure of trauma and immune response to a hepatitis B vaccination program ⬇️

scientific article published on October 1, 1995

Disentangling Immediate Adaptive Introgression from Selection on Standing Introgressed Variation in Humans ⬇️

scientific article published on 6 December 2017

Diversity of lactase persistence in African milk drinkers

scientific article published on 9 June 2015

Early Neolithic genomes from the eastern Fertile Crescent

scientific article

Early farmers from across Europe directly descended from Neolithic Aegeans

scientific article published on 06 June 2016

Efficient retroviral infection of mammalian cells is blocked by inhibition of poly(ADP-ribose) polymerase activity

scientific article published in June 1996

Erratum: The Beaker phenomenon and the genomic transformation of northwest Europe

scientific article published in Nature

Estimating mobility using sparse data: Application to human genetic variation

scientific article

Ethiopian genetic diversity reveals linguistic stratification and complex influences on the Ethiopian gene pool

scientific article (publication date: 13 July 2012)

Evaluating bacterial pathogen DNA preservation in museum osteological collections

scientific article (publication date: 22 March 2006)

Evidence for a Common Origin of Blacksmiths and Cultivators in the Ethiopian Ari within the Last 4500 Years: Lessons for Clustering-Based Inference

scientific article published on 20 August 2015

Evidence for an apartheid-like social structure in early Anglo-Saxon England

scientific article

Evolution in health and medicine Sackler colloquium: Making evolutionary biology a basic science for medicine

scientific article

Evolution of a length polymorphism in the human PER3 gene, a component of the circadian system

scientific article

Evolution of lactase persistence: an example of human niche construction

scientific article (publication date: 27 March 2011)

Excavating past population structures by surname-based sampling: the genetic legacy of the Vikings in northwest England

scientific article

Food Income and the Evolution of Forager Mobility

article

Founding mothers of Jewish communities: geographically separated Jewish groups were independently founded by very few female ancestors

scientific article

From a dry bone to a genetic portrait: A case study of sickle cell anemia

From a dry bone to a genetic portrait: a case study of sickle cell anemia

scientific article

Genetic discontinuity between local hunter-gatherers and central Europe's first farmers

scientific article

Genetic diversity of CHC22 clathrin impacts its function in glucose metabolism.

scientific article published on 4 June 2019

Genetic evidence for a western Chinese origin of broomcorn millet ()

article

Genetic legacy of state centralization in the Kuba Kingdom of the Democratic Republic of the Congo

article published in the Proceedings of the National Academy of Sciences of the United States of America

Genetic structure and extinction of the woolly mammoth, Mammuthus primigenius

scientific article

Genomic analyses inform on migration events during the peopling of Eurasia

scientific article (publication date: 13 October 2016)

Genomic signals of migration and continuity in Britain before the Anglo-Saxons

scientific article published on 19 January 2016

Genomic variations in the hepatitis B core gene: a possible factor influencing response to interferon alfa treatment

scientific article published in February 1995

Guidelines for health care workers who have hepatitis B virus or human immunodeficiency virus infection

scientific article published on March 11, 1992

HIV-1 infection status in two HIV-1 antibody positive infants determined using the polymerase chain reaction

scientific article published on November 27, 1991

Health and population effects of rare gene knockouts in adult humans with related parents

scientific article

Hepatitis B virus variants with core gene deletions in the evolution of chronic hepatitis B infection

scientific article published in July 1996

Herders of Indian and European cattle share their predominant allele for lactase persistence

scientific article

High throughput analysis of 10 microsatellite and 11 diallelic polymorphisms on the human Y-chromosome

scientific article

High-resolution Y chromosome haplotypes of Israeli and Palestinian Arabs reveal geographic substructure and substantial overlap with haplotypes of Jews

scientific article (publication date: December 2000)

High-throughput analysis of informative CYP2D6 compound haplotypes

scientific article published in February 2003

How long have adult humans been consuming milk?

scientific article

Human immunodeficiency virus infection in women in Auckland: an evolving epidemic

scientific article published on July 14, 1995

Identification of the remains of King Richard III

scientific article

In-frame seven amino-acid duplication in AIP arose over the last 3000 years, disrupts protein interaction and stability and is associated with gigantism

scientific article

Increased Population Risk of AIP-Related Acromegaly and Gigantism in Ireland

scientific article published on 21 September 2016

Increased prevalence of M694V in patients with ankylosing spondylitis: additional evidence for a link with familial mediterranean fever

scientific article published on October 2010

Inferring allele frequency trajectories from ancient DNA indicates that selection on a chicken gene coincided with changes in medieval husbandry practices

scientific article published on 21 April 2017

Integration versus apartheid in post-Roman Britain: a response to Pattison.

scientific article published on 29 July 2008

Intentional and unintentional nonadherence in patients prescribed HAART treatment regimens ⬇️

scientific article published on 01 November 2003

Invasive Disease Due to Epidermophyton floccosum in an Immunocompromised Patient with Behçet's Syndrome ⬇️

scientific article published on July 1, 1997

Investigating mitochondrial DNA relationships in Neolithic Western Europe through serial coalescent simulations

scientific article published on 28 December 2016

Key Residues of a Major Cytochrome P4502D6 Epitope Are Located on the Surface of the Molecule

scientific article published on 01 July 2002

Lactose digestion and the evolutionary genetics of lactase persistence

scientific article (publication date: 26 November 2008)

Large-scale migration into Britain during the Middle to Late Bronze Age

scientific article published in January 2022

Late Pleistocene demography and the appearance of modern human behavior

scientific article

Little genetic differentiation as assessed by uniparental markers in the presence of substantial language variation in peoples of the Cross River region of Nigeria

scientific article

Long-term DNA survival in ethanol-preserved archival material

scientific article

Low Prevalence of Lactase Persistence in Bronze Age Europe Indicates Ongoing Strong Selection over the Last 3,000 Years

scientific article published on 28 August 2020

Metallothionein genes from the flowering plant Mimulus guttatus

scientific article published on 01 January 1990

Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs

scientific article (publication date: 7 June 2007)

Mitochondrial DNA and IQ in Europe

article published in 1998

Modeling recent human evolution in mice by expression of a selected EDAR variant

scientific article

Modern taurine cattle descended from small number of near-eastern founders

scientific article published on 14 March 2012

Molecular diversity and population structure at the Cytochrome P450 3A5 gene in Africa

scientific article

Molecular instability in the COII-tRNA(Lys) intergenic region of the human mitochondrial genome: multiple origins of the 9-bp deletion and heteroplasmy for expanded repeats.

scientific article

Molecular phylogeny of genus Guizotia (Asteraceae) using DNA sequences derived from ITS

scholarly article by Endashaw Bekele et al published 7 December 2006 in Genet Resour Crop Evol

Multiple origins of Ashkenazi Levites: Y chromosome evidence for both Near Eastern and European ancestries

scientific article

Multiple rare variants as a cause of a common phenotype: several different lactase persistence associated alleles in a single ethnic group

scientific article published on 24 November 2009

New genetic evidence supports isolation and drift in the Ladin communities of the South Tyrolean Alps but not an ancient origin in the Middle East

scientific article (publication date: 2008)

No unexpected CRISPR-Cas9 off-target activity revealed by trio sequencing of gene-edited mice

scientific article published on 09 July 2018

Normophosphatemic familial tumoral calcinosis is caused by deleterious mutations in SAMD9, encoding a TNF-alpha responsive protein

scientific article

Obesity, starch digestion and amylase: association between copy number variants at human salivary (AMY1) and pancreatic (AMY2) amylase genes

scientific article

Oral microbiomes from hunter-gatherers and traditional farmers reveal shifts in commensal balance and pathogen load linked to diet

scientific article

Origins of Old Testament priests

scientific article published in July 1998

Paecilomyces lilacinus Peritonitis in a Peritoneal Dialysis Patient ⬇️

scientific article published on May 1, 2012

Palaeoecological and genetic evidence for Neanderthal power locomotion as an adaptation to a woodland environment

scientific article published in January 2019

Palenque de San Basilio in Colombia: genetic data support an oral history of a paternal ancestry in Congo

scientific article

Pharmacokinetics of zidovudine plus probenecid

scientific article published on 01 September 1992

Pitfalls of the Geographic Population Structure (GPS) Approach Applied to Human Genetic History: A Case Study of Ashkenazi Jews

scientific article

Population Replacement in Early Neolithic Britain

Population genetic structure of variable drug response

scientific article

Population history of the Hispaniolan hutia Plagiodontia aedium (Rodentia: Capromyidae): testing the model of ancient differentiation on a geotectonically complex Caribbean island

scientific article

Population structure in the Mediterranean basin: a Y chromosome perspective

scientific article (publication date: March 2006)

Preparation of bone samples for DNA extraction: a nuts and bolts approach.

scientific article

Presence of a newly described human DNA virus (TTV) in patients with liver disease

scientific article published in July 1998

Prevalence of clinically relevant UGT1A alleles and haplotypes in African populations

scientific article published in March 2011

Radiocarbon evidence indicates that migrants introduced farming to Britain

article

Rare Deep-Rooting Y Chromosome Lineages in Humans: Lessons for Phylogeography ⬇️

scientific article published on September 1, 2003

Reconstructing Prehistoric African Population Structure

scientific article published on September 2017

Reduced intensity of bone fat exploitation correlates with increased potential access to dairy fats in early Neolithic Europe

Regional population collapse followed initial agriculture booms in mid-Holocene Europe

scientific article published on January 2013

Reply to 'The 'extremely ancient' chromosome that isn't' by Elhaik et al

scientific article

Resolution of chronic hepatitis B and anti-HBs seroconversion in humans by adoptive transfer of immunity to hepatitis B core antigen

scientific article published on 01 March 2002

Rethinking the dispersal of Homo sapiens out of Africa.

scientific article

Ribeiro's typology, genomes, and Spanish colonialism, as viewed from Gran Canaria and Colombia

scientific article (publication date: 2004)

Sequence Note: Human Immunodeficiency Virus Type 1 Subtypes B and C Detected in New Zealand ⬇️

scientific article published on August 10, 1998

Sequencing of cDNA using anchored oligo dT primers.

scientific article published on August 1993

Sex-Specific Genetic Data Support One of Two Alternative Versions of the Foundation of the Ruling Dynasty of the Nso' in Cameroon.

scientific article

Staying out in the cold: glacial refugia and mitochondrial DNA phylogeography in ancient European brown bears

scientific article

Storytelling and story testing in domestication

scientific article (publication date: 29 April 2014)

Structural and functional annotation of the porcine immunome

scientific article

Summary: the science of genealogy by genetics

scientific article published in December 2003

Surprising migration and population size dynamics in ancient Iberian brown bears (Ursus arctos)

scientific article (publication date: April 2008)

Synchronous diversification of Sulawesi's iconic artiodactyls driven by recent geological events

scientific article published in April 2018

THE IMPORTANCE OF DIETARY CARBOHYDRATE IN HUMAN EVOLUTION.

scientific article

TT virus infection in patients with primary hypogammaglobulinaemia: natural history and relationship to liver disease in the immunocompromised host

scientific article published in September 2001

The Anglo-Saxon migration and the formation of the early English gene pool ⬇️

scientific article published on 21 September 2022

The Beaker Phenomenon And The Genomic Transformation Of Northwest Europe

The Beaker phenomenon and the genomic transformation of northwest Europe

scientific article published on 21 February 2018

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

scientific article

The Genetic Legacy of Zoroastrianism in Iran and India: Insights into Population Structure, Gene Flow, and Selection

scientific article published on 16 August 2017

The Greeks in the West: genetic signatures of the Hellenic colonisation in southern Italy and Sicily

scientific article

The Rise and Fall of BritainsDNA: A Tale of Misleading Claims, Media Manipulation and Threats to Academic Freedom

scientific article published on 2 November 2018

The T allele of a single-nucleotide polymorphism 13.9 kb upstream of the lactase gene (LCT) (C-13.9kbT) does not predict or cause the lactase-persistence phenotype in Africans

scientific article

The Vertebrate Genome Annotation browser 10 years on

scientific article

The evolution of lactase persistence in Europe. A synthesis of archaeological and genetic evidence

article

The flickering genes of the last mammoths ⬇️

scientific article published on July 1, 2012

The frequency of an IL-18-associated haplotype in Africans

scientific article published on 29 August 2012

The genetic history of Europeans

scientific article

The origins of lactase persistence in Europe

scientific article

The peopling of Europe and the cautionary tale of Y chromosome lineage R-M269

scientific article

The phylogenetic position of the 'giant deer' Megaloceros giganteus.

scientific article

The potentially deleterious functional variant flavin-containing monooxygenase 2*1 is at high frequency throughout sub-Saharan Africa

scientific article published on October 2008

Three Reportedly Unrelated Families With Liddle Syndrome Inherited From a Common Ancestor

scientific article published on 11 December 2017

Topical imiquimod treatment of aciclovir-resistant herpes simplex disease: case series and literature review ⬇️

scientific article published on March 15, 2011

Transition to farming more likely for small, conservative groups with property rights, but increased productivity is not essential

scientific article

Tuberculosis in those with HIV infection

scientific article published on September 26, 1997

Understanding cumulative cultural evolution

scientific article published on 25 October 2016

Upper gastrointestinal endoscopy in patients with human immunodeficiency virus infection: is it worthwhile?

scientific article published on November 25, 1992

World-wide distributions of lactase persistence alleles and the complex effects of recombination and selection

scientific article published on 23 October 2017

XAF1 as a modifier of p53 function and cancer susceptibility

scientific article published on 24 June 2020

Y chromosome evidence for Anglo-Saxon mass migration

scientific article (publication date: July 2002)

Y chromosome haplotypes and testicular cancer in the English population

scientific article published in March 2003

Y chromosome travelled north

scientific article published on 09 May 2007

Y-chromosome evidence for differing ancient demographic histories in the Americas

scientific article

‘Ava’: a Beaker-associated woman from a cist at Achavanich, Highland, and the story of her (re-)discovery and subsequent study

scientific article published on 21 November 2018

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