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List of works by Simone Linz

A Tight Kernel for Computing the Tree Bisection and Reconnection Distance between Two Phylogenetic Trees

scholarly article

A first step toward computing all hybridization networks for two rooted binary phylogenetic trees

scientific article published in November 2012

A likelihood framework to measure horizontal gene transfer

scientific article published on 20 March 2007

A reduction algorithm for computing the hybridization number of two trees.

scientific article published on 30 May 2007

Analyzing and reconstructing reticulation networks under timing constraints

scientific article published in November 2010

Attaching leaves and picking cherries to characterise the hybridisation number for a set of phylogenies

scholarly article

Autumn Algorithm - Computation of Hybridization Networks for Realistic Phylogenetic Trees

scientific article published on 2 March 2016

Caterpillars on three and four leaves are sufficient to reconstruct binary normal networks

scientific article published on 09 September 2020

Cherry picking: a characterization of the temporal hybridization number for a set of phylogenies

scientific article published on 8 August 2013

Deciding the existence of a cherry-picking sequence is hard on two trees

scholarly article

Deep kernelization for the Tree Bisection and Reconnection (TBR) distance in phylogenetics

scholarly article

Hybridization in nonbinary trees.

scientific article published in January 2009

Identifying a species tree subject to random lateral gene transfer

scientific article published on 20 January 2013

Lost in space? Generalising subtree prune and regraft to spaces of phylogenetic networks

scientific article

On Hill et al's conjecture for calculating the subtree prune and regraft distance between phylogenies ⬇️

scientific article published on October 29, 2010

On the Maximum Agreement Subtree Conjecture for Balanced Trees

scientific article published in 2022

On the quirks of maximum parsimony and likelihood on phylogenetic networks.

scientific article published on 10 January 2017

PRODORIC: prokaryotic database of gene regulation.

scientific article published on January 2003

Phylogenetic networks that display a tree twice.

scientific article published on 23 September 2014

Quantifying hybridization in realistic time

scientific article published on 6 January 2011

Spaces of phylogenetic networks from generalized nearest-neighbor interchange operations.

scientific article published on 3 June 2015

The complexity of finding multiple solutions to betweenness and quartet compatibility

scientific article published on 20 July 2011

The rigid hybrid number for two phylogenetic trees

scientific article published in 2021

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