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List of works by Shadi Shokralla

A DNA Mini-Barcoding System for Authentication of Processed Fish Products

scientific article published on 30 October 2015

Altered intestinal microbiota-host mitochondria crosstalk in new onset Crohn's disease

scientific article

Assessing biodiversity of a freshwater benthic macroinvertebrate community through non-destructive environmental barcoding of DNA from preservative ethanol

scientific article published on December 23, 2012

DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities

scientific article published on 15 November 2017

DNA metabarcoding reveals metacommunity dynamics in a threatened boreal wetland wilderness

scientific article published on 26 March 2020

Determinants of Soil Bacterial and Fungal Community Composition Toward Carbon-Use Efficiency Across Primary and Secondary Forests in a Costa Rican Conservation Area

scientific article published on 01 June 2018

Direct PCR amplification and sequencing of specimens' DNA from preservative ethanol

scientific article published in March 2010

Discrimination of grasshopper (Orthoptera: Acrididae) diet and niche overlap using next-generation sequencing of gut contents

scientific article published on 7 July 2015

Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos

scientific article

Fecal source tracking and eDNA profiling in an urban creek following an extreme rain event

scientific article published in Scientific Reports

High throughput automated allele frequency estimation by pyrosequencing

scientific article

Large-Scale Biomonitoring of Remote and Threatened Ecosystems via High-Throughput Sequencing

scientific article published on 21 October 2015

Large-Scale Monitoring of Plants through Environmental DNA Metabarcoding of Soil: Recovery, Resolution, and Annotation of Four DNA Markers

scientific article

Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform

scientific article

Mitochondrial and nuclear phylogenetic analysis with Sanger and next-generation sequencing shows that, in Área de Conservación Guanacaste, northwestern Costa Rica, the skipper butterfly named Urbanus belli (family Hesperiidae) comprises three morpho

scientific article

Next-generation DNA barcoding: using next-generation sequencing to enhance and accelerate DNA barcode capture from single specimens

scientific article

Next-generation sequencing technologies for environmental DNA research

scientific article

Performance of amplicon and shotgun sequencing for accurate biomass estimation in invertebrate community samples

scientific article published on 18 April 2018

Pyrosequencing for mini-barcoding of fresh and old museum specimens

scientific article

Rapid and accurate taxonomic classification of insect (class Insecta) cytochromecoxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier

article by Teresita M Porter et al published March 2014 in Molecular Ecology Resources

Ribosomal DNA and Plastid Markers Used to Sample Fungal and Plant Communities from Wetland Soils Reveals Complementary Biotas

scientific article published on 5 January 2016

Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

scientific article

Using metagenomics to show the efficacy of forest restoration in the New Jersey Pine Barrens

scientific article published on 21 July 2017

Watered-down biodiversity? A comparison of metabarcoding results from DNA extracted from matched water and bulk tissue biomonitoring samples

scientific article published on 12 December 2019