List of works - Marcel J T Reinders

A meta-analysis of genome-wide association studies identifies multiple longevity genes

scientific article published on 14 August 2019

A nonsynonymous mutation in PLCG2 reduces the risk of Alzheimer’s disease, dementia with Lewy bodies and frontotemporal dementia, and increases the likelihood of longevity

article by Sven J. van der Lee et al published 27 May 2019 in Acta Neuropathologica

Author Correction: Timing and localization of human dystrophin isoform expression provide insights into the cognitive phenotype of Duchenne muscular dystrophy

scientific article published in March 2018

Automatic Gene Function Prediction in the 2020's

scientific article published on 27 October 2020

Causal inference using observational intensive care unit data: a scoping review and recommendations for future practice

scientific article published in 2023

Centenarian controls increase variant effect sizes by an average twofold in an extreme case-extreme control analysis of Alzheimer's disease.

scientific article published on 26 September 2018

Characterization of pathogenic SORL1 genetic variants for association with Alzheimer's disease: a clinical interpretation strategy

scientific article published on 24 May 2017

Combinatorial effects of environmental parameters on transcriptional regulation in Saccharomyces cerevisiae: a quantitative analysis of a compendium of chemostat-based transcriptome data.

scientific article

Correction to: A nonsynonymous mutation in PLCG2 reduces the risk of Alzheimer's disease, dementia with Lewy bodies and frontotemporal dementia, and increases the likelihood of longevity

scientific article published on 18 January 2020

Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data

scientific article

De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology

scientific article published on 26 March 2012

Differential analysis of binarized single-cell RNA sequencing data captures biological variation

scientific article published on 22 December 2021

Dynamic clonal hematopoiesis and functional T-cell immunity in a supercentenarian

scientific article published on 12 November 2020

Exploiting combinatorial cultivation conditions to infer transcriptional regulation

scientific article

Extreme enrichment of VNTR-associated polymorphicity in human subtelomeres: genes with most VNTRs are predominantly expressed in the brain

scientific article published on 02 November 2020

Immune response and endocytosis pathways are associated with the resilience against Alzheimer's disease

scientific article published on 29 September 2020

Integrating protein-protein interaction networks with gene-gene co-expression networks improves gene signatures for classifying breast cancer metastasis

scientific article published on 16 December 2011

Machine Learning Electronic Health Record Identification of Patients with Rheumatoid Arthritis: Algorithm Pipeline Development and Validation Study

scientific article published on 30 November 2020

Meta-analysis on blood transcriptomic studies identifies consistently coexpressed protein-protein interaction modules as robust markers of human aging

scientific article

Metabolic Age Based on the BBMRI-NL 1H-NMR Metabolomics Repository as Biomarker of Age-related Disease

scientific article published on 14 August 2020

Nucleus-specific expression in the multinuclear mushroom-forming fungus Agaricus bisporus reveals different nuclear regulatory programs.

scientific article

Physiological and transcriptional responses of Saccharomyces cerevisiae to zinc limitation in chemostat cultures

scientific article published on 12 October 2007

Predicting metabolic fluxes using gene expression differences as constraints

scientific article published in January 2011

Predicting patient response with models trained on cell lines and patient-derived xenografts by nonlinear transfer learning

scientific article published on 06 December 2021

Prioritizing sequence variants in conserved non-coding elements in the chicken genome using chCADD

scientific article published on 23 September 2020

Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes

scientific article published in November 2007

Single-cell reference mapping to construct and extend cell type hierarchies

scientific article

The Effect of Phenotype and Genotype on the Plasma Proteome in Patients with Inflammatory Bowel Disease

scientific article published on 01 March 2022

Timing and localization of human dystrophin isoform expression provide insights into the cognitive phenotype of Duchenne muscular dystrophy

scientific article

Transcriptomic signatures of brain regional vulnerability to Parkinson's disease

scientific article published on 05 March 2020

Uncompromised 10-year survival of oldest old carrying somatic mutations in DNMT3A and TET2.

scientific article published on 29 January 2016

Using Out-of-Batch Reference Populations to Improve Untargeted Metabolomics for Screening Inborn Errors of Metabolism

scientific article published on 25 December 2020

Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types.

scientific article published on 23 November 2017

List of works by Marcel J T Reinders

A meta-analysis of genome-wide association studies identifies multiple longevity genes

A nonsynonymous mutation in PLCG2 reduces the risk of Alzheimer’s disease, dementia with Lewy bodies and frontotemporal dementia, and increases the likelihood of longevity

Author Correction: Timing and localization of human dystrophin isoform expression provide insights into the cognitive phenotype of Duchenne muscular dystrophy

Automatic Gene Function Prediction in the 2020's

Causal inference using observational intensive care unit data: a scoping review and recommendations for future practice

Centenarian controls increase variant effect sizes by an average twofold in an extreme case-extreme control analysis of Alzheimer's disease.

Characterization of pathogenic SORL1 genetic variants for association with Alzheimer's disease: a clinical interpretation strategy

Combinatorial effects of environmental parameters on transcriptional regulation in Saccharomyces cerevisiae: a quantitative analysis of a compendium of chemostat-based transcriptome data.

Correction to: A nonsynonymous mutation in PLCG2 reduces the risk of Alzheimer's disease, dementia with Lewy bodies and frontotemporal dementia, and increases the likelihood of longevity

Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data

De novo sequencing, assembly and analysis of the genome of the laboratory strain Saccharomyces cerevisiae CEN.PK113-7D, a model for modern industrial biotechnology

Differential analysis of binarized single-cell RNA sequencing data captures biological variation

Dynamic clonal hematopoiesis and functional T-cell immunity in a supercentenarian

Exploiting combinatorial cultivation conditions to infer transcriptional regulation

Extreme enrichment of VNTR-associated polymorphicity in human subtelomeres: genes with most VNTRs are predominantly expressed in the brain

Immune response and endocytosis pathways are associated with the resilience against Alzheimer's disease

Integrating protein-protein interaction networks with gene-gene co-expression networks improves gene signatures for classifying breast cancer metastasis

Machine Learning Electronic Health Record Identification of Patients with Rheumatoid Arthritis: Algorithm Pipeline Development and Validation Study

Meta-analysis on blood transcriptomic studies identifies consistently coexpressed protein-protein interaction modules as robust markers of human aging

Metabolic Age Based on the BBMRI-NL 1H-NMR Metabolomics Repository as Biomarker of Age-related Disease

Nucleus-specific expression in the multinuclear mushroom-forming fungus Agaricus bisporus reveals different nuclear regulatory programs.

Physiological and transcriptional responses of Saccharomyces cerevisiae to zinc limitation in chemostat cultures

Predicting metabolic fluxes using gene expression differences as constraints

Predicting patient response with models trained on cell lines and patient-derived xenografts by nonlinear transfer learning

Prioritizing sequence variants in conserved non-coding elements in the chicken genome using chCADD

Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes

Single-cell reference mapping to construct and extend cell type hierarchies

The Effect of Phenotype and Genotype on the Plasma Proteome in Patients with Inflammatory Bowel Disease

Timing and localization of human dystrophin isoform expression provide insights into the cognitive phenotype of Duchenne muscular dystrophy

Transcriptomic signatures of brain regional vulnerability to Parkinson's disease

Uncompromised 10-year survival of oldest old carrying somatic mutations in DNMT3A and TET2.

Using Out-of-Batch Reference Populations to Improve Untargeted Metabolomics for Screening Inborn Errors of Metabolism

Visual analysis of mass cytometry data by hierarchical stochastic neighbour embedding reveals rare cell types.