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List of works by Shanmuga Sozhamannan

A Yersinia pestis-specific, lytic phage preparation significantly reduces viable Y. pestis on various hard surfaces experimentally contaminated with the bacterium

scientific article

AOAC SMPR 2016.009.

scientific article

AOAC SMPR 2016.010.

scientific article published on January 2017

AOAC SMPR 2016.012.

scientific article published in January 2017

AOAC SMPR(®) 2016.007.

scientific article published in July 2016

AOAC SMPR(®) 2016.008.

scientific article published on July 2016

Arbovirus detection in insect vectors by rapid, high-throughput pyrosequencing

scientific article

Avirulent Bacillus anthracis Strain with Molecular Assay Targets as Surrogate for Irradiation-Inactivated Virulent Spores

scientific article published in April 2018

Bacteriophage functional genomics and its role in bacterial pathogen detection

scientific article published on 21 March 2013

Beyond the chromosome: the prevalence of unique extra-chromosomal bacteriophages with integrated virulence genes in pathogenic Staphylococcus aureus

scientific article

BioLaboro: A bioinformatics system for detecting molecular assay signature erosion and designing new assays in response to emerging and reemerging pathogens

scientific article published on 10 April 2020

Blind Spot: A Braille Patterned Novel Multiplex Lateral Flow Immunoassay Sensor Array for the Detection of Biothreat Agents

scientific article published in 2021

Characterization of pPCP1 Plasmids in Yersinia pestis Strains Isolated from the Former Soviet Union

scientific article

Comparative genomic analyses of the vibrio pathogenicity island and cholera toxin prophage regions in nonepidemic serogroup strains of Vibrio cholerae

scientific article

Comparison of the performance of an amplicon sequencing assay based on Oxford Nanopore technology to real-time PCR assays for detecting bacterial biodefense pathogens

scientific article published on 17 February 2020

Development of a high throughput assay for indirectly measuring phage growth using the OmniLog(TM) system

scientific article published on July 2012

Evaluation of Signature Erosion in Ebola Virus Due to Genomic Drift and Its Impact on the Performance of Diagnostic Assays

scientific article published on 17 June 2015

Evidence for the emergence of non-O1 and non-O139 Vibrio cholerae strains with pathogenic potential by exchange of O-antigen biosynthesis regions.

scientific article

Exception to the Rule: Genomic Characterization of Naturally Occurring Unusual Vibrio cholerae Strains with a Single Chromosome.

scientific article published on 29 August 2017

Exception to the exception rule: synthetic and naturally occurring single chromosome Vibrio cholerae

scientific article published on 01 April 2020

Functionality of Two Origins of Replication in Strains With a Single Chromosome

article published in 2018

Genetic evidence for the involvement of the S-layer protein gene sap and the sporulation genes spo0A, spo0B, and spo0F in Phage AP50c infection of Bacillus anthracis

scientific article

Genetic variation and linkage disequilibrium in Bacillus anthracis

scientific article published on 24 November 2011

Genome sequencing of 15 clinical Vibrio isolates, including 13 non-o1/non-o139 serogroup strains

scientific article

Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis

scientific article published on 29 May 2012

Genomic characterization of the Yersinia genus

scientific article

Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2

scientific article

Genomic signatures of strain selection and enhancement in Bacillus atrophaeus var. globigii, a historical biowarfare simulant

scientific article published in 2011

High-redundancy draft sequencing of 15 clinical and environmental Burkholderia strains

scientific article

Molecular characterization of a variant of Bacillus anthracis-specific phage AP50 with improved bacteriolytic activity

scientific article

Multilocus sequence typing has better discriminatory ability for typing Vibrio cholerae than does pulsed-field gel electrophoresis and provides a measure of phylogenetic relatedness

scientific article

Next generation sequencing technologies and the changing landscape of phage genomics

scientific article published on July 2012

Novel high-molecular-weight, R-type bacteriocins of Clostridium difficile

scientific article published on 14 September 2012

PheMaDB: a solution for storage, retrieval, and analysis of high throughput phenotype data

scientific article

Quantitative characterization of quantum dot-labeled lambda phage for Escherichia coli detection.

scientific article

RTX toxin actin cross-linking activity in clinical and environmental isolates of Vibrio cholerae

scientific article published on 23 May 2007

Rapid identification of genetic modifications in Bacillus anthracis using whole genome draft sequences generated by 454 pyrosequencing

scientific article

Scanning the landscape of genome architecture of non-O1 and non-O139 Vibrio cholerae by whole genome mapping reveals extensive population genetic diversity

scientific article

Sensitive detection of live Escherichia coli by bacteriophage amplification-coupled immunoassay on the Luminex® MAGPIX instrument

scientific article published on 02 August 2018

Standards for sequencing viral genomes in the era of high-throughput sequencing

scientific article published on 17 June 2014

The Bacillus anthracis chromosome contains four conserved, excision-proficient, putative prophages

scientific article

The State of the Art in Biodefense Related Bacterial Pathogen Detection Using Bacteriophages: How It Started and How It's Going

scientific article published on 04 December 2020

The odd one out: Bacillus ACT bacteriophage CP-51 exhibits unusual properties compared to related Spounavirinae W.Ph. and Bastille

scientific article published on 08 July 2014

Whole genome sequencing and comparative genomic analyses of two Vibrio cholerae O139 Bengal-specific Podoviruses to other N4-like phages reveal extensive genetic diversity

scientific article published on 28 May 2013

Whole genome sequencing of phage resistant Bacillus anthracis mutants reveals an essential role for cell surface anchoring protein CsaB in phage AP50c adsorption

scientific article published on 26 October 2012

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