List of works - Martin Unterseher

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

scientific article published on 19 March 2015

An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

scholarly article by Henrik Nilsson et al published November 2010 in Fungal Ecology

Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden)

scientific article (publication date: 26 September 2016)

Application of species richness estimators for the assessment of fungal diversity

scientific article published on 18 March 2008

Current state and perspectives of fungal DNA barcoding and rapid identification procedures

scientific article

Dilution-to-extinction cultivation of leaf-inhabiting endophytic fungi in beech (Fagus sylvatica L.)--different cultivation techniques influence fungal biodiversity assessment

scientific article

Diversity and Composition of the Leaf Mycobiome of Beech (Fagus sylvatica) Are Affected by Local Habitat Conditions and Leaf Biochemistry

scientific article

Diversity of Fungal Endophytes in Temperate Forest Trees

Ecology of sandstone ravine myxomycetes from Saxonian Switzerland (Germany)

article

Endophytic fungi from Peruvian highland and lowland habitats form distinctive and host plant-specific assemblages

article

First insight into dead wood protistan diversity: a molecular sampling of bright-spored Myxomycetes (Amoebozoa, slime-moulds) in decaying beech logs

scientific article

Genetic barcoding of dark-spored myxomycetes (Amoebozoa)-Identification, evaluation and application of a sequence similarity threshold for species differentiation in NGS studies

scientific article published on 12 October 2017

Habitat conditions and phenological tree traits overrule the influence of tree genotype in the needle mycobiome-Picea glauca system at an arctic treeline ecotone

scientific article published on 4 May 2016

Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

article

Improving ITS sequence data for identification of plant pathogenic fungi

article

Influence of small scale conditions on the diversity of wood decay fungi in a temperate, mixed deciduous forest canopy

scientific article

Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets

scientific article

Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes

scientific article

Morphological and molecular analyses of fungal endophytes of achlorophyllous gametophytes of Diphasiastrum alpinum (Lycopodiaceae).

scientific article published on 18 October 2013

Mycobiomes of sympatric Amorphophallus albispathus (Araceae) and Camellia sinensis (Theaceae) – a case study reveals clear tissue preferences and differences in diversity and composition

article

Population performance of Moringa peregrina (Forssk.) Fiori (Moringaceae) at Sinai Peninsula, Egypt in the last decades: Consequences for its conservation

scholarly article by Mohamed A. Dadamouny et al published December 2016 in Journal for Nature Conservation

Species abundance distributions and richness estimations in fungal metagenomics--lessons learned from community ecology

scientific article

Species richness and ecological characterization of myxomycetes and myxomycete-like organisms in the canopy of a temperate deciduous forest

scientific article published in March 2006

Taxonomic annotation of public fungal ITS sequences from the built environment - a report from an April 10-11, 2017 workshop (Aberdeen, UK).

scientific article

Tuning the Voices of a Choir: Detecting Ecological Gradients in Time-Series Populations

scientific article

What do we learn from cultures in the omics age? High-throughput sequencing and cultivation of leaf-inhabiting endophytes from beech (Fagus sylvatica L.) revealed complementary community composition but similar correlations with local habitat cond...

scientific article (publication date: 21 February 2017)

List of works by Martin Unterseher

A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden)

Application of species richness estimators for the assessment of fungal diversity

Current state and perspectives of fungal DNA barcoding and rapid identification procedures

Dilution-to-extinction cultivation of leaf-inhabiting endophytic fungi in beech (Fagus sylvatica L.)--different cultivation techniques influence fungal biodiversity assessment

Diversity and Composition of the Leaf Mycobiome of Beech (Fagus sylvatica) Are Affected by Local Habitat Conditions and Leaf Biochemistry

Diversity of Fungal Endophytes in Temperate Forest Trees

Ecology of sandstone ravine myxomycetes from Saxonian Switzerland (Germany)

Endophytic fungi from Peruvian highland and lowland habitats form distinctive and host plant-specific assemblages

First insight into dead wood protistan diversity: a molecular sampling of bright-spored Myxomycetes (Amoebozoa, slime-moulds) in decaying beech logs

Genetic barcoding of dark-spored myxomycetes (Amoebozoa)-Identification, evaluation and application of a sequence similarity threshold for species differentiation in NGS studies

Habitat conditions and phenological tree traits overrule the influence of tree genotype in the needle mycobiome-Picea glauca system at an arctic treeline ecotone

Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

Improving ITS sequence data for identification of plant pathogenic fungi

Influence of small scale conditions on the diversity of wood decay fungi in a temperate, mixed deciduous forest canopy

Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets

Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes

Morphological and molecular analyses of fungal endophytes of achlorophyllous gametophytes of Diphasiastrum alpinum (Lycopodiaceae).

Mycobiomes of sympatric Amorphophallus albispathus (Araceae) and Camellia sinensis (Theaceae) – a case study reveals clear tissue preferences and differences in diversity and composition

Population performance of Moringa peregrina (Forssk.) Fiori (Moringaceae) at Sinai Peninsula, Egypt in the last decades: Consequences for its conservation

Species abundance distributions and richness estimations in fungal metagenomics--lessons learned from community ecology

Species richness and ecological characterization of myxomycetes and myxomycete-like organisms in the canopy of a temperate deciduous forest

Taxonomic annotation of public fungal ITS sequences from the built environment - a report from an April 10-11, 2017 workshop (Aberdeen, UK).

Tuning the Voices of a Choir: Detecting Ecological Gradients in Time-Series Populations

What do we learn from cultures in the omics age? High-throughput sequencing and cultivation of leaf-inhabiting endophytes from beech (Fagus sylvatica L.) revealed complementary community composition but similar correlations with local habitat cond...