List of works - Muzlifah Haniffa

A cell atlas of human thymic development defines T cell repertoire formation

scientific article published on 01 February 2020

A cell atlas of human thymic development defines T cell repertoire formation

A three-dimensional atlas of human dermal leukocytes, lymphatics, and blood vessels

scientific article

Adult Human Fibroblasts Are Potent Immunoregulatory Cells and Functionally Equivalent to Mesenchymal Stem Cells

scientific article published on 01 August 2007

Anatomical Structures, Cell Types, and Biomarkers Tables Plus 3D Reference Organs in Support of a Human Reference Atlas

scholarly article published 1 June 2021

Anatomical structures, cell types and biomarkers of the Human Reference Atlas

scientific article published on 08 November 2021

Antigen-Presenting Cells in the Skin

scientific article published on 6 February 2017

Blood and immune development in human fetal bone marrow and Down syndrome

scientific article published on 29 September 2021

CD1c+ blood dendritic cells have Langerhans cell potential.

scientific article published on 28 October 2014

Cells of the human intestinal tract mapped across space and time

Comparative genomics analysis of mononuclear phagocyte subsets confirms homology between lymphoid tissue-resident and dermal XCR1(+) DCs in mouse and human and distinguishes them from Langerhans cells

scientific article published on 7 March 2016

Comparison of gene expression profiles between human and mouse monocyte subsets

scientific article

Complete human CD1a deficiency on Langerhans cells due to a rare point mutation in the coding sequence

scientific article published on 29 June 2016

Cutaneous extramedullary hemopoiesis in chronic myeloproliferative and myelodysplastic disorders

scientific article published on August 2006

Decoding human fetal liver haematopoiesis

scientific article published on 09 October 2019

Defining the Skin Cellular Community Using Single-Cell Genomics to Advance Precision Medicine

scientific article published on 23 July 2020

Delayed induction of type I and III interferons mediates nasal epithelial cell permissiveness to SARS-CoV-2

scientific article published on 07 December 2021

Differential rates of replacement of human dermal dendritic cells and macrophages during hematopoietic stem cell transplantation

scientific article published on 26 January 2009

Differential regulation of naïve and memory CD4+ T cells by alternatively activated dendritic cells

scientific article published on 22 April 2008

Donor monocyte-derived macrophages promote human acute graft versus host disease

scientific article published on 26 May 2020

Early Molecular Stratification of High-risk Primary Biliary Cholangitis

scientific article

Educational programmes for skin cancer prevention

scientific article (published 2010-10-06)

Educational programmes for skin cancer prevention

scientific article

Epithelial damage and tissue γδ T cells promote a unique tumor-protective IgE response

scholarly article by Greg Crawford et al published August 2018 in Nature Immunology

Exome sequencing identifies GATA-2 mutation as the cause of dendritic cell, monocyte, B and NK lymphoid deficiency.

scientific article

Gene expression variability across cells and species shapes innate immunity

scientific article published in Nature

Generation of dexamethasone and vitamin D3-treated human monocyte-derived dendritic cells with tolerogenic properties.

scientific article

Genetics: Taking single-cell transcriptomics to the bedside.

scientific article published in August 2017

Hematopoietic origin of Langerhans cell histiocytosis and Erdheim-Chester disease in adults.

scientific article published on 16 May 2017

Human SARS-CoV-2 challenge uncovers local and systemic response dynamics

scientific article published on 19 June 2024

Human and Mouse Mononuclear Phagocyte Networks: A Tale of Two Species?

scientific article published on 25 June 2015

Human dendritic cell deficiency: the missing ID?

scientific article published on 19 August 2011

Human dendritic cell subsets

scientific article published on September 2013

Human dermal CD14⁺ cells are a transient population of monocyte-derived macrophages

scientific article

Human fetal dendritic cells promote prenatal T-cell immune suppression through arginase-2.

scientific article published on 14 June 2017

Human mononuclear phagocyte system reunited.

scientific article published on 15 May 2015

Human skin dendritic cells in health and disease

scientific article

Human tissues contain CD141hi cross-presenting dendritic cells with functional homology to mouse CD103+ nonlymphoid dendritic cells

scientific article

IRF4 transcription factor-dependent CD11b+ dendritic cells in human and mouse control mucosal IL-17 cytokine responses

scientific article published on May 2013

IRF8 mutations and human dendritic-cell immunodeficiency

scientific article

Identification of HIV transmitting CD11c+ human epidermal dendritic cells

scientific article published on 21 June 2019

Identification of human tissue cross-presenting dendritic cells: A new target for cancer vaccines

scientific article published on March 2013

Interventions to improve use of continuous positive airway pressure for obstructive sleep apnoea

scientific article

Isolation of Human Skin Dendritic Cell Subsets

scientific article published in January 2016

Langerin-expressing dendritic cells in human tissues are related to CD1c+ dendritic cells and distinct from Langerhans cells and CD141high XCR1+ dendritic cells.

scientific article published on 16 December 2014

Lipopolysaccharide inhalation recruits monocytes and dendritic cell subsets to the alveolar airspace

scientific article published on 30 April 2019

Local and systemic responses to SARS-CoV-2 infection in children and adults

scientific article published on 22 December 2021

Macrophage proliferation distinguishes 2 subgroups of knee osteoarthritis patients

scientific article published on 24 January 2019

Mapping human development at single-cell resolution.

scientific article published on 8 February 2018

Mapping the human DC lineage through the integration of high-dimensional techniques.

scientific article published on 4 May 2017

Mesenchymal stem cells: the fibroblasts' new clothes?

scientific article published on 23 December 2008

Metabolic regulation of hepatitis B immunopathology by myeloid-derived suppressor cells.

scientific article published on 11 May 2015

Mobilizing monocytes to cross-present circulating viral antigen in chronic infection.

scientific article published on August 2013

Multiplexed gene expression analysis of HLA class II-associated podoconiosis implicates chronic immune activation in its pathogenesis

scientific article published on 24 October 2020

Muzlifah Haniffa-a new era for collaborative and supportive medical research

scientific article published on 01 February 2020

Neutrophil mobilization via plerixafor-mediated CXCR4 inhibition arises from lung demargination and blockade of neutrophil homing to the bone marrow

scientific article

OME-Zarr: a cloud-optimized bioimaging file format with international community support

scientific article published in 2023

Ontogeny and functional specialization of dendritic cells in human and mouse

scientific article published on January 2013

Perivascular dendritic cells elicit anaphylaxis by relaying allergens to mast cells via microvesicles

scientific article published in Science

Phenotypic and functional consequences of different isolation protocols on skin mononuclear phagocytes

scientific article

Poised cell circuits in human skin are activated in disease ⬇️

journal article from 'bioRxiv' published in 2020

Population of Monocyte-Derived Macrophages

scientific article published on 17 February 2015

Prenatal development of human immunity

scientific article published on 01 May 2020

Rapid detection of dendritic cell and monocyte disorders using CD4 as a lineage marker of the human peripheral blood antigen-presenting cell compartment

scientific article published on 27 December 2013

Re-evaluation of human BDCA-2+ DC during acute sterile skin inflammation

scientific article published on 01 March 2020

Reconstructing human DC, monocyte and macrophage development in utero using single cell technologies

scientific article published on 04 May 2020

Regulatory T-cell suppression of CD8+ T-cell-mediated graft-versus-host reaction requires their presence during priming

scientific article published on 01 July 2009

Selective susceptibility of human skin antigen presenting cells to productive dengue virus infection

scientific article

Single cell derived mRNA signals across human kidney tumors

scientific article published on 23 June 2021

Single-Cell RNA Sequencing Reveals a Dynamic Stromal Niche That Supports Tumor Growth

scientific article published on 01 May 2020

Single-Cell Transcriptomics of Regulatory T Cells Reveals Trajectories of Tissue Adaptation

scholarly article by Ricardo J Miragaia et al published 19 February 2019 in Immunity

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

scientific article

Single-cell multi-omics analysis of the immune response in COVID-19

scientific article published on 20 April 2021

Single-cell reconstruction of the early maternal–fetal interface in humans

scientific article published in Nature

Single-cell transcriptomics links malignant T cells to the tumor immune landscape in cutaneous T cell lymphoma

scientific article published on 03 March 2022

Single-cell transcriptomics reveals a distinct developmental state of KMT2A-rearranged infant B-cell acute lymphoblastic leukemia

scientific article published on 14 March 2022

Skin dendritic cell and T cell activation associated with dengue shock syndrome

scientific article published on 27 October 2017

Spatiotemporal immune zonation of the human kidney

scientific article

The Human Cell Atlas

scientific article

The Human Cell Atlas

The Human Cell Atlas White Paper ⬇️

journal article from 'arXiv:1810.05192 [q-bio]' published in 2018

The cellular immune response to COVID-19 deciphered by single cell multi-omics across three UK centres

scientific article published on 15 January 2021

The evolution of cellular deficiency in GATA2 mutation

scientific article published on 17 December 2013

The human syndrome of dendritic cell, monocyte, B and NK lymphoid deficiency ⬇️

scientific article published on 17 January 2011

The immunological network in the developing human skin

scientific article published on 16 March 2020

The impact of single-cell RNA sequencing on understanding the functional organization of the immune system

scientific article published on 01 July 2018

The local and systemic response to SARS-CoV-2 infection in children and adults

scientific article published on 15 March 2021

Tumor to normal single-cell mRNA comparisons reveal a pan-neuroblastoma cancer cell

article by Gerda Kildisiute et al published February 2021 in Science Advances

Ultrahigh thermal conductivity confirmed in boron arsenide

scientific article

Use of topical glycopyrrolate in Ross syndrome

scientific article published on 01 November 2006

Yolk sac cell atlas reveals multiorgan functions during human early development

scientific article published on 17 August 2023

List of works by Muzlifah Haniffa

A cell atlas of human thymic development defines T cell repertoire formation

A cell atlas of human thymic development defines T cell repertoire formation

A three-dimensional atlas of human dermal leukocytes, lymphatics, and blood vessels

Adult Human Fibroblasts Are Potent Immunoregulatory Cells and Functionally Equivalent to Mesenchymal Stem Cells

Anatomical Structures, Cell Types, and Biomarkers Tables Plus 3D Reference Organs in Support of a Human Reference Atlas

Anatomical structures, cell types and biomarkers of the Human Reference Atlas

Antigen-Presenting Cells in the Skin

Blood and immune development in human fetal bone marrow and Down syndrome

CD1c+ blood dendritic cells have Langerhans cell potential.

Cells of the human intestinal tract mapped across space and time

Comparative genomics analysis of mononuclear phagocyte subsets confirms homology between lymphoid tissue-resident and dermal XCR1(+) DCs in mouse and human and distinguishes them from Langerhans cells

Comparison of gene expression profiles between human and mouse monocyte subsets

Complete human CD1a deficiency on Langerhans cells due to a rare point mutation in the coding sequence

Cutaneous extramedullary hemopoiesis in chronic myeloproliferative and myelodysplastic disorders

Decoding human fetal liver haematopoiesis

Defining the Skin Cellular Community Using Single-Cell Genomics to Advance Precision Medicine

Delayed induction of type I and III interferons mediates nasal epithelial cell permissiveness to SARS-CoV-2

Differential rates of replacement of human dermal dendritic cells and macrophages during hematopoietic stem cell transplantation

Differential regulation of naïve and memory CD4+ T cells by alternatively activated dendritic cells

Donor monocyte-derived macrophages promote human acute graft versus host disease

Early Molecular Stratification of High-risk Primary Biliary Cholangitis

Educational programmes for skin cancer prevention

Educational programmes for skin cancer prevention

Epithelial damage and tissue γδ T cells promote a unique tumor-protective IgE response

Exome sequencing identifies GATA-2 mutation as the cause of dendritic cell, monocyte, B and NK lymphoid deficiency.

Gene expression variability across cells and species shapes innate immunity

Generation of dexamethasone and vitamin D3-treated human monocyte-derived dendritic cells with tolerogenic properties.

Genetics: Taking single-cell transcriptomics to the bedside.

Hematopoietic origin of Langerhans cell histiocytosis and Erdheim-Chester disease in adults.

Human SARS-CoV-2 challenge uncovers local and systemic response dynamics

Human and Mouse Mononuclear Phagocyte Networks: A Tale of Two Species?

Human dendritic cell deficiency: the missing ID?

Human dendritic cell subsets

Human dermal CD14⁺ cells are a transient population of monocyte-derived macrophages

Human fetal dendritic cells promote prenatal T-cell immune suppression through arginase-2.

Human mononuclear phagocyte system reunited.

Human skin dendritic cells in health and disease

Human tissues contain CD141hi cross-presenting dendritic cells with functional homology to mouse CD103+ nonlymphoid dendritic cells

IRF4 transcription factor-dependent CD11b+ dendritic cells in human and mouse control mucosal IL-17 cytokine responses

IRF8 mutations and human dendritic-cell immunodeficiency

Identification of HIV transmitting CD11c+ human epidermal dendritic cells

Identification of human tissue cross-presenting dendritic cells: A new target for cancer vaccines

Interventions to improve use of continuous positive airway pressure for obstructive sleep apnoea

Isolation of Human Skin Dendritic Cell Subsets

Langerin-expressing dendritic cells in human tissues are related to CD1c+ dendritic cells and distinct from Langerhans cells and CD141high XCR1+ dendritic cells.

Lipopolysaccharide inhalation recruits monocytes and dendritic cell subsets to the alveolar airspace

Local and systemic responses to SARS-CoV-2 infection in children and adults

Macrophage proliferation distinguishes 2 subgroups of knee osteoarthritis patients

Mapping human development at single-cell resolution.

Mapping the human DC lineage through the integration of high-dimensional techniques.

Mesenchymal stem cells: the fibroblasts' new clothes?

Metabolic regulation of hepatitis B immunopathology by myeloid-derived suppressor cells.

Mobilizing monocytes to cross-present circulating viral antigen in chronic infection.

Multiplexed gene expression analysis of HLA class II-associated podoconiosis implicates chronic immune activation in its pathogenesis

Muzlifah Haniffa-a new era for collaborative and supportive medical research

Neutrophil mobilization via plerixafor-mediated CXCR4 inhibition arises from lung demargination and blockade of neutrophil homing to the bone marrow

OME-Zarr: a cloud-optimized bioimaging file format with international community support

Ontogeny and functional specialization of dendritic cells in human and mouse

Perivascular dendritic cells elicit anaphylaxis by relaying allergens to mast cells via microvesicles

Phenotypic and functional consequences of different isolation protocols on skin mononuclear phagocytes

Poised cell circuits in human skin are activated in disease ⬇️

Population of Monocyte-Derived Macrophages

Prenatal development of human immunity

Rapid detection of dendritic cell and monocyte disorders using CD4 as a lineage marker of the human peripheral blood antigen-presenting cell compartment

Re-evaluation of human BDCA-2+ DC during acute sterile skin inflammation

Reconstructing human DC, monocyte and macrophage development in utero using single cell technologies

Regulatory T-cell suppression of CD8+ T-cell-mediated graft-versus-host reaction requires their presence during priming

Selective susceptibility of human skin antigen presenting cells to productive dengue virus infection

Single cell derived mRNA signals across human kidney tumors

Single-Cell RNA Sequencing Reveals a Dynamic Stromal Niche That Supports Tumor Growth

Single-Cell Transcriptomics of Regulatory T Cells Reveals Trajectories of Tissue Adaptation

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

Single-cell multi-omics analysis of the immune response in COVID-19

Single-cell reconstruction of the early maternal–fetal interface in humans

Single-cell transcriptomics links malignant T cells to the tumor immune landscape in cutaneous T cell lymphoma

Single-cell transcriptomics reveals a distinct developmental state of KMT2A-rearranged infant B-cell acute lymphoblastic leukemia

Skin dendritic cell and T cell activation associated with dengue shock syndrome

Spatiotemporal immune zonation of the human kidney

The Human Cell Atlas