List of works - Alexey G. Murzin

4-Oxalocrotonate tautomerase, its homologue YwhB, and active vinylpyruvate hydratase: synthesis and evaluation of 2-fluoro substrate analogues

scientific article

A fortuitous insight into a common mode of RNA recognition by the dsRNA-specific zinc fingers

scholarly article

A protein catalytic framework with an N-terminal nucleophile is capable of self-activation

scientific article

A ribosomal protein module in EF-G and DNA gyrase.

scientific article

A role for the universal Kae1/Qri7/YgjD (COG0533) family in tRNA modification

scientific article

A six-stranded double-psi beta barrel is shared by several protein superfamilies.

scientific article

Aerolysin and pertussis toxin share a common receptor-binding domain

scientific article

Biochemical and Structural Characterization of a Novel Family of Cystathionine β-Synthase Domain Proteins Fused to a Zn Ribbon-Like Domain

scientific article

Biochemical and Structural Studies of Conserved Maf Proteins Revealed Nucleotide Pyrophosphatases with a Preference for Modified Nucleotides

scientific article

Biochemistry. DNA building block reinvented

scientific article published on 23 May 2002

Biochemistry. Metamorphic proteins

scientific article

CASP2 knowledge-based approach to distant homology recognition and fold prediction in CASP4.

scientific article

Ca-inhibited binding of melittin with parvalbumin. A new role for parvalbumins?

scientific article published in May 1989

Can homologous proteins evolve different enzymatic activities?

scientific article published on November 1993

Circularly permuted dihydrofolate reductase of E. coli has functional activity and a destabilized tertiary structure.

scientific article

Cloning, expression, and characterization of a cis-3-chloroacrylic acid dehalogenase: insights into the mechanistic, structural, and evolutionary relationship between isomer-specific 3-chloroacrylic acid dehalogenases

scientific article

Comparative genomics guided discovery of two missing archaeal enzyme families involved in the biosynthesis of the pterin moiety of tetrahydromethanopterin and tetrahydrofolate

scientific article

Crystal structure of the malignant brain tumor (MBT) repeats in Sex Comb on Midleg-like 2 (SCML2)

scientific article

Data growth and its impact on the SCOP database: new developments

scientific article (publication date: 2008)

Determination of protein function, evolution and interactions by structural genomics.

scientific article

Dimeric dUTPases, HisE, and MazG belong to a new superfamily of all-alpha NTP pyrophosphohydrolases with potential "house-cleaning" functions

scientific article

Distant homology recognition using structural classification of proteins

scientific article

Distant homology recognition using structural classification of proteins

scientific article published in 1997

Erratum: A protein catalytic framework with an N-terminal nucleophile is capable of self-activation

scientific article published in Nature

Evolution of protein fold in the presence of functional constraints

scientific article

Expression, purification, and biophysical studies of chromodomain proteins

scientific article published on January 2004

Familiar strangers

scientific article published on December 17, 1992

Filling out the structural map of the NTF2-like superfamily

scientific article

General architecture of the alpha-helical globule

scientific article

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains

scientific article

Genome3D: exploiting structure to help users understand their sequences

scientific article

House cleaning, a part of good housekeeping

scientific article

How far divergent evolution goes in proteins ⬇️

scientific article published on June 1, 1998

Identification of protein fold and catalytic residues of gamma-hexachlorocyclohexane dehydrochlorinase LinA

Identification of protein fold and catalytic residues of γ-hexachlorocyclohexane dehydrochlorinase LinA

scientific article published on 26 October 2001

Introduction of Ca(2+)-binding amino-acid sequence into the T4 lysozyme

scientific article published on 01 March 1993

Investigating Protein Structure and Evolution with SCOP2.

scientific article

Mechanistic characterization of a bacterial malonate semialdehyde decarboxylase: identification of a new activity on the tautomerase superfamily

scientific article published on 23 September 2003

Muralytic activity of Micrococcus luteus Rpf and its relationship to physiological activity in promoting bacterial growth and resuscitation

scientific article published in January 2006

N-ethylmaleimide-sensitive fusion protein (NSF) and CDC48 confirmed as members of the double-psi beta-barrel aspartate decarboxylase/formate dehydrogenase family

scientific article

NMR solution structure of a dsRNA binding domain from Drosophila staufen protein reveals homology to the N-terminal domain of ribosomal protein S5 ⬇️

scientific article published on July 17, 1995

NMR structure of AbhN and comparison with AbrBN: FIRST insights into the DNA binding promiscuity and specificity of AbrB-like transition state regulator proteins

scientific article published on 15 May 2006

New folds for all-beta proteins

scientific article published on December 1993

OB(oligonucleotide/oligosaccharide binding)-fold: common structural and functional solution for non-homologous sequences

scientific article (publication date: March 1993)

Prediction targets of CASP4

scientific article published on 01 January 2001

Principles determining the structure of beta-sheet barrels in proteins. I. A theoretical analysis

scientific article

Principles determining the structure of beta-sheet barrels in proteins. II. The observed structures

scientific article

Probable circular permutation in the flavin-binding domain

scientific article published on 01 February 1998

Progress in protein structure prediction

scientific article published on 01 February 2001

Revised structure of the AbrB N-terminal domain unifies a diverse superfamily of putative DNA-binding proteins

scientific article published on 4 October 2005

SCOP database in 2002: refinements accommodate structural genomics

scientific article

SCOP database in 2004: refinements integrate structure and sequence family data

scientific article (publication date: 2004)

SCOP, Structural Classification of Proteins database: applications to evaluation of the effectiveness of sequence alignment methods and statistics of protein structural data

scientific article

SCOP2 prototype: a new approach to protein structure mining

scientific article

SCOP: a Structural Classification of Proteins database

scientific article published in January 1999

SCOP: a Structural Classification of Proteins database

scientific article published on 01 January 1997

SCOP: a structural classification of proteins database

scientific article

SCOP: a structural classification of proteins database for the investigation of sequences and structures

scientific article (publication date: 7 April 1995)

SISYPHUS--structural alignments for proteins with non-trivial relationships

scientific article published in January 2007

Sequences and topology: Predicting evolution.

scientific article published in June 1997

Structural classification of proteins and structural genomics: new insights into protein folding and evolution ⬇️

scientific article published on July 6, 2010

Structural classification of proteins: new superfamilies

scientific article published in June 1996

Structural model for interferons

scientific article

Structural principles for the propeller assembly of beta-sheets: the preference for seven-fold symmetry

scientific article (publication date: October 1992)

Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis

scientific article

Structure and distribution of pentapeptide repeats in bacteria ⬇️

scientific article published on June 1, 1998

Structure classification-based assessment of CASP3 predictions for the fold recognition targets

scientific article published on January 1999

Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15

scientific article

Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9

scientific article

Structure of the chromatin binding (chromo) domain from mouse modifier protein 1.

scientific article

Structure of the chromo barrel domain from the MOF acetyltransferase

scientific article

Structure of the virulence-associated protein VapD from the intracellular pathogenRhodococcus equi

scientific article

Structures of filaments from Pick's disease reveal a novel tau protein fold

scientific article published in Nature

Sweet-tasting protein monellin is related to the cystatin family of thiol proteinase inhibitors

scientific article published in March 1993

The 2.0-A resolution crystal structure of a trimeric antibody fragment with noncognate VH-VL domain pairs shows a rearrangement of VH CDR3

scientific article

The HI0073/HI0074 protein pair from Haemophilus influenzae is a member of a new nucleotidyltransferase family: structure, sequence analyses, and solution studies

scientific article

The crystal structure of YdcE, a 4-oxalocrotonate tautomerase homologue from Escherichia coli, confirms the structural basis for oligomer diversity

scientific article

The solution structure of the S1 RNA binding domain: a member of an ancient nucleic acid-binding fold

scientific article

Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila

scientific article

Understanding protein structure: using scop for fold interpretation

scientific article

[Predicting the three-dimensional structure of alpha- and beta-interferons]

scientific article published on 01 January 1986

beta-Trefoil fold. Patterns of structure and sequence in the Kunitz inhibitors interleukins-1 beta and 1 alpha and fibroblast growth factors

scientific article

List of works by Alexey G. Murzin

4-Oxalocrotonate tautomerase, its homologue YwhB, and active vinylpyruvate hydratase: synthesis and evaluation of 2-fluoro substrate analogues

A fortuitous insight into a common mode of RNA recognition by the dsRNA-specific zinc fingers

A protein catalytic framework with an N-terminal nucleophile is capable of self-activation

A ribosomal protein module in EF-G and DNA gyrase.

A role for the universal Kae1/Qri7/YgjD (COG0533) family in tRNA modification

A six-stranded double-psi beta barrel is shared by several protein superfamilies.

Aerolysin and pertussis toxin share a common receptor-binding domain

Biochemical and Structural Characterization of a Novel Family of Cystathionine β-Synthase Domain Proteins Fused to a Zn Ribbon-Like Domain

Biochemical and Structural Studies of Conserved Maf Proteins Revealed Nucleotide Pyrophosphatases with a Preference for Modified Nucleotides

Biochemistry. DNA building block reinvented

Biochemistry. Metamorphic proteins

CASP2 knowledge-based approach to distant homology recognition and fold prediction in CASP4.

Ca-inhibited binding of melittin with parvalbumin. A new role for parvalbumins?

Can homologous proteins evolve different enzymatic activities?

Circularly permuted dihydrofolate reductase of E. coli has functional activity and a destabilized tertiary structure.

Cloning, expression, and characterization of a cis-3-chloroacrylic acid dehalogenase: insights into the mechanistic, structural, and evolutionary relationship between isomer-specific 3-chloroacrylic acid dehalogenases

Comparative genomics guided discovery of two missing archaeal enzyme families involved in the biosynthesis of the pterin moiety of tetrahydromethanopterin and tetrahydrofolate

Crystal structure of the malignant brain tumor (MBT) repeats in Sex Comb on Midleg-like 2 (SCML2)

Data growth and its impact on the SCOP database: new developments

Determination of protein function, evolution and interactions by structural genomics.

Dimeric dUTPases, HisE, and MazG belong to a new superfamily of all-alpha NTP pyrophosphohydrolases with potential "house-cleaning" functions

Distant homology recognition using structural classification of proteins

Distant homology recognition using structural classification of proteins

Erratum: A protein catalytic framework with an N-terminal nucleophile is capable of self-activation

Evolution of protein fold in the presence of functional constraints

Expression, purification, and biophysical studies of chromodomain proteins

Familiar strangers

Filling out the structural map of the NTF2-like superfamily

General architecture of the alpha-helical globule

Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains

Genome3D: exploiting structure to help users understand their sequences

House cleaning, a part of good housekeeping

How far divergent evolution goes in proteins ⬇️

Identification of protein fold and catalytic residues of gamma-hexachlorocyclohexane dehydrochlorinase LinA

Identification of protein fold and catalytic residues of γ-hexachlorocyclohexane dehydrochlorinase LinA

Introduction of Ca(2+)-binding amino-acid sequence into the T4 lysozyme

Investigating Protein Structure and Evolution with SCOP2.

Mechanistic characterization of a bacterial malonate semialdehyde decarboxylase: identification of a new activity on the tautomerase superfamily

Muralytic activity of Micrococcus luteus Rpf and its relationship to physiological activity in promoting bacterial growth and resuscitation

N-ethylmaleimide-sensitive fusion protein (NSF) and CDC48 confirmed as members of the double-psi beta-barrel aspartate decarboxylase/formate dehydrogenase family

NMR solution structure of a dsRNA binding domain from Drosophila staufen protein reveals homology to the N-terminal domain of ribosomal protein S5 ⬇️

NMR structure of AbhN and comparison with AbrBN: FIRST insights into the DNA binding promiscuity and specificity of AbrB-like transition state regulator proteins

New folds for all-beta proteins

OB(oligonucleotide/oligosaccharide binding)-fold: common structural and functional solution for non-homologous sequences

Prediction targets of CASP4

Principles determining the structure of beta-sheet barrels in proteins. I. A theoretical analysis

Principles determining the structure of beta-sheet barrels in proteins. II. The observed structures

Probable circular permutation in the flavin-binding domain

Progress in protein structure prediction

Revised structure of the AbrB N-terminal domain unifies a diverse superfamily of putative DNA-binding proteins

SCOP database in 2002: refinements accommodate structural genomics

SCOP database in 2004: refinements integrate structure and sequence family data

SCOP, Structural Classification of Proteins database: applications to evaluation of the effectiveness of sequence alignment methods and statistics of protein structural data

SCOP2 prototype: a new approach to protein structure mining

SCOP: a Structural Classification of Proteins database

SCOP: a Structural Classification of Proteins database

SCOP: a structural classification of proteins database

SCOP: a structural classification of proteins database for the investigation of sequences and structures

SISYPHUS--structural alignments for proteins with non-trivial relationships

Sequences and topology: Predicting evolution.

Structural classification of proteins and structural genomics: new insights into protein folding and evolution ⬇️

Structural classification of proteins: new superfamilies

Structural model for interferons

Structural principles for the propeller assembly of beta-sheets: the preference for seven-fold symmetry

Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis

Structure and distribution of pentapeptide repeats in bacteria ⬇️

Structure classification-based assessment of CASP3 predictions for the fold recognition targets

Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15

Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9

Structure of the chromatin binding (chromo) domain from mouse modifier protein 1.

Structure of the chromo barrel domain from the MOF acetyltransferase

Structure of the virulence-associated protein VapD from the intracellular pathogenRhodococcus equi

Structures of filaments from Pick's disease reveal a novel tau protein fold

Sweet-tasting protein monellin is related to the cystatin family of thiol proteinase inhibitors

The 2.0-A resolution crystal structure of a trimeric antibody fragment with noncognate VH-VL domain pairs shows a rearrangement of VH CDR3

The HI0073/HI0074 protein pair from Haemophilus influenzae is a member of a new nucleotidyltransferase family: structure, sequence analyses, and solution studies

The crystal structure of YdcE, a 4-oxalocrotonate tautomerase homologue from Escherichia coli, confirms the structural basis for oligomer diversity

The solution structure of the S1 RNA binding domain: a member of an ancient nucleic acid-binding fold

Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila