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List of works by Steven J. Ludtke

3-D Structures of Macromolecules Using Single-Particle Analysis in EMAN ⬇️

scientific article published on January 1, 2010

3D Structure of IP(3) Receptor

scientific article published on 25 July 2010

4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement

scientific article

A 11.5 Å single particle reconstruction of GroEL using EMAN ⬇️

scientific article published on November 23, 2001

A 9 angstroms single particle reconstruction from CCD captured images on a 200 kV electron cryomicroscope

scientific article published in August 2004

A Near-Atomic Structure of the Dark Apoptosome Provides Insight into Assembly and Activation

scientific article published on 16 November 2016

A complete data processing workflow for cryo-ET and subtomogram averaging

scientific article published on 14 October 2019

A structure of the human apoptosome at 12.8 A resolution provides insights into this cell death platform

scientific article published on 01 November 2005

Alignment algorithms and per-particle CTF correction for single particle cryo-electron tomography

scientific article

An atomic model of brome mosaic virus using direct electron detection and real-space optimization

scientific article

An expanded conformation of single-ring GroEL-GroES complex encapsulates an 86 kDa substrate

scientific article

Architecture of the Ribosome–Channel Complex Derived from Native Membranes

scientific article published on 01 April 2005

Automatic particle selection: results of a comparative study

scientific article published on January 2004

CTF Challenge: Result summary.

scientific article published on 23 April 2015

Characterization of antibiotic peptide pores using cryo-EM and comparison to neutron scattering

scientific article published on July 2009

Close membrane-membrane proximity induced by Ca(2+)-dependent multivalent binding of synaptotagmin-1 to phospholipids

scientific article published on 19 February 2006

Constructing and validating initial Cα models from subnanometer resolution density maps with pathwalking

scientific article published in March 2012

Convolutional neural networks for automated annotation of cellular cryo-electron tomograms

scientific article published on 28 August 2017

Cross-neutralizing human anti-poliovirus antibodies bind the recognition site for cellular receptor

scientific article

Cryo-EM Structure of a Molluscan Hemocyanin Suggests Its Allosteric Mechanism

scientific article

Cryo-EM of macromolecular assemblies at near-atomic resolution

scientific article

Cryo-EM reveals ligand induced allostery underlying InsPR channel gating

scientific article published on 23 November 2018

Cryoelectron microscopy structures of rotavirus NSP2-NSP5 and NSP2-RNA complexes: implications for genome replication.

scientific article

Data management challenges in three-dimensional EM.

scientific article

De Novo modeling in cryo-EM density maps with Pathwalking

scientific article

De novo backbone trace of GroEL from single particle electron cryomicroscopy

scientific article

Details of ssDNA annealing revealed by an HSV-1 ICP8-ssDNA binary complex

scientific article published on 19 April 2013

Direct Measurement of the Structure of Reconstituted High-Density Lipoproteins by Cryo-EM.

scientific article published on 29 December 2015

Discrete structure of an RNA folding intermediate revealed by cryo-electron microscopy

scientific article

Disruption of human plasma high-density lipoproteins by streptococcal serum opacity factor requires labile apolipoprotein A-I.

scientific article

Domain organization of membrane-bound factor VIII.

scientific article

EMAN2: an extensible image processing suite for electron microscopy

scientific article (publication date: 2007)

EMDataBank unified data resource for 3DEM.

scientific article

EMDataBank.org: unified data resource for CryoEM

scientific article

EMEN2: an object oriented database and electronic lab notebook

scientific article

Electron cryomicroscopy of single particles at subnanometer resolution

scientific article

Emdatabank: Unified Data Resource for 3DEM

Erratum: Structural diversity of supercoiled DNA

scientific article published in Nature Communications

Experimental verification of conformational variation of human fatty acid synthase as predicted by normal mode analysis

scientific article published in February 2004

Flexible architecture of IP3R1 by Cryo-EM

scientific article

Focal pair merging for contrast enhancement of single particles

scientific article published in October 2003

Gating machinery of InsP3R channels revealed by electron cryomicroscopy

scientific article published on 12 October 2015

High resolution single particle refinement in EMAN2.1.

scientific article

Human CCT4 and CCT5 chaperonin subunits expressed in Escherichia coli form biologically active homo-oligomers

scientific article published on 23 April 2013

Improvement of cryo-EM maps by density modification

scientific article published on 17 August 2020

In situ structure and assembly of the multidrug efflux pump AcrAB-TolC.

scientific article published on 14 June 2019

Integrative structure and functional anatomy of a nuclear pore complex.

scientific article published on 14 March 2018

Interprotofilament interactions between Alzheimer's Abeta1-42 peptides in amyloid fibrils revealed by cryoEM

scientific article

MRC2014: Extensions to the MRC format header for electron cryo-microscopy and tomography

scientific article published on 13 April 2015

Mechanism of folding chamber closure in a group II chaperonin

scientific article

Mechanism of lid closure in the eukaryotic chaperonin TRiC/CCT

scientific article published on 8 June 2008

Mitochondrial ATP synthasome: three-dimensional structure by electron microscopy of the ATP synthase in complex formation with carriers for Pi and ADP/ATP.

scientific article published on 27 May 2004

Model of human low-density lipoprotein and bound receptor based on cryoEM

scientific article

New software tools in EMAN2 inspired by EMDatabank map challenge

scientific article published on 04 September 2018

Object oriented database and electronic notebook for transmission electron microscopy

scientific article published on December 2003

Outcome of the first electron microscopy validation task force meeting

scientific article (publication date: 8 February 2012)

Quaternary structure of human fatty acid synthase by electron cryomicroscopy

scientific article

Ribosome binding of a single copy of the SecY complex: implications for protein translocation

scientific article

SPARX, a new environment for Cryo-EM image processing

scientific article published on 16 July 2006

Seeing GroEL at 6 A resolution by single particle electron cryomicroscopy

scientific article published on July 2004

Single particle analysis at high resolution

scientific article

Single particle tomography in EMAN2

scientific article published on 5 May 2015

Single-particle cryo-EM of calcium release channels: structural validation

scientific article

Single-particle electron cryomicroscopy of the ion channels in the excitation-contraction coupling junction

scientific article published on January 2007

Structural Insights of Transcriptionally Active, Full-Length Androgen Receptor Coactivator Complexes

scientific article published on 08 July 2020

Structural analysis of the anaphase-promoting complex reveals multiple active sites and insights into polyubiquitylation

scientific article published on December 2005

Structural and Functional Impacts of ER Coactivator Sequential Recruitment

scientific article published on 23 August 2017

Structural and functional analyses of photosystem II in the marine diatom Phaeodactylum tricornutum

scientific article published on 13 August 2019

Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions

scientific article published on 18 November 2019

Structural diversity of supercoiled DNA. ⬇️

scientific article

Structural mechanism of SDS-induced enzyme activity of scorpion hemocyanin revealed by electron cryomicroscopy

scientific article

Structure of Ca2+ release channel at 14 A resolution

scientific article

Structure of a biologically active estrogen receptor-coactivator complex on DNA.

scientific article

Structure of an apoptosome-procaspase-9 CARD complex.

scientific article

Structure of the 30 kDa HIV-1 RNA Dimerization Signal by a Hybrid Cryo-EM, NMR, and Molecular Dynamics Approach

scientific article published in February 2018

Structure of the Drosophila Apoptosome at 6.9 Å Resolution

scientific article

Structure of the SecY channel during initiation of protein translocation

scientific article

Structure of the bifunctional and Golgi-associated formiminotransferase cyclodeaminase octamer

scientific article published on 22 July 2004

Structure of the type 1 inositol 1,4,5-trisphosphate receptor revealed by electron cryomicroscopy

scientific article published on 24 April 2003

Subnanometer-resolution electron cryomicroscopy-based domain models for the cytoplasmic region of skeletal muscle RyR channel

scientific article

TRiC's tricks inhibit huntingtin aggregation

scientific article published on 09 July 2013

The 2010 cryo-EM modeling challenge

scientific article published in September 2012

The Electron Microscopy eXchange (EMX) initiative

scientific article

The advent of structural biology in situ by single particle cryo-electron tomography.

scientific article published on 29 May 2017

The holo-apoptosome: activation of procaspase-9 and interactions with caspase-3

scientific article

The pore structure of the closed RyR1 channel

scientific article

The skeletal muscle Ca2+ release channel has an oxidoreductase-like domain

scientific article

Validation of cryo-EM structure of IP₃R1 channel

scientific article published on 23 May 2013

Visualizing Individual RuBisCO and Its Assembly into Carboxysomes in Marine Cyanobacteria by Cryo-Electron Tomography

scientific article published on 20 August 2018

Workshop on the validation and modeling of electron cryo-microscopy structures of biological nanomachines

scientific article published on January 2011

X-ray diffraction study of lipid bilayer membranes interacting with amphiphilic helical peptides: diphytanoyl phosphatidylcholine with alamethicin at low concentrations ⬇️

scientific article published on June 1, 1995

X-ray scattering with momentum transfer in the plane of membrane. Application to gramicidin organization ⬇️

scientific article published on January 1, 1993

Zernike phase-contrast electron cryotomography applied to marine cyanobacteria infected with cyanophages

scientific article

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