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List of works by Vladislav V Verkhusha

A FRET-facilitated photoswitching using an orange fluorescent protein with the fast photoconversion kinetics.

scientific article

A Structural Basis for Reversible Photoswitching of Absorbance Spectra in Red Fluorescent Protein rsTagRFP

scientific article

A bacterial phytochrome-based optogenetic system controllable with near-infrared light

scientific article published on 09 May 2016

A knot in the protein structure - probing the near-infrared fluorescent protein iRFP designed from a bacterial phytochrome.

scientific article

A near-infrared BiFC reporter for in vivo imaging of protein-protein interactions

scientific article published on 25 July 2013

A near-infrared genetically encoded calcium indicator for in vivo imaging

scientific article published on 26 October 2020

A palette of fluorescent proteins optimized for diverse cellular environments

scientific article

A photoconvertible fluorescent reporter to track chaperone-mediated autophagy

scientific article

A photoswitchable orange-to-far-red fluorescent protein, PSmOrange

scientific article

A set of monomeric near-infrared fluorescent proteins for multicolor imaging across scales

scientific article published on 13 January 2020

Advances in engineering of fluorescent proteins and photoactivatable proteins with red emission

scientific article

Akt inhibitor MK2206 prevents influenza pH1N1 virus infection in vitro.

scientific article

Allosteric effects of chromophore interaction with dimeric near-infrared fluorescent proteins engineered from bacterial phytochromes.

scientific article

An enhanced monomeric blue fluorescent protein with the high chemical stability of the chromophore

scientific article

An orange fluorescent protein with a large Stokes shift for single-excitation multicolor FCCS and FRET imaging

scientific article

Bacterial Phytochromes, Cyanobacteriochromes and Allophycocyanins as a Source of Near-Infrared Fluorescent Probes.

scientific article published on 3 August 2017

Bacterial phytochrome as a scaffold for engineering of receptor tyrosine kinases controlled with near-infrared light

scientific article published on 14 April 2020

Beta-barrel scaffold of fluorescent proteins: folding, stability and role in chromophore formation

scientific article

Bright and stable near-infrared fluorescent protein for in vivo imaging

scientific article

Bright blue-shifted fluorescent proteins with Cys in the GAF domain engineered from bacterial phytochromes: fluorescence mechanisms and excited-state dynamics

scientific article

Bright monomeric near-infrared fluorescent proteins as tags and biosensors for multiscale imaging

scientific article published on 19 August 2016

Bright monomeric photoactivatable red fluorescent protein for two-color super-resolution sptPALM of live cells

scientific article

Cell-based andin vivospectral analysis of fluorescent proteins for multiphoton microscopy ⬇️

scientific article published on September 1, 2012

Chromophore binding to two cysteines increases quantum yield of near-infrared fluorescent proteins

scientific article published in Scientific Reports

Chromophore chemistry of fluorescent proteins controlled by light

scientific article

Chromophore transformations in red fluorescent proteins ⬇️

scientific article published on May 4, 2012

Common pathway for the red chromophore formation in fluorescent proteins and chromoproteins

scientific article published on June 2004

Comparative studies on the structure and stability of fluorescent proteins EGFP, zFP506, mRFP1, "dimer2", and DsRed1.

scientific article published in November 2004

Conversion of red fluorescent protein into a bright blue probe

scientific article published on October 2008

Cysteineless non-glycosylated monomeric blue fluorescent protein, secBFP2, for studies in the eukaryotic secretory pathway

scientific article published on 19 December 2012

Deep-tissue photoacoustic tomography of a genetically encoded near-infrared fluorescent probe

scientific article published on 23 December 2011

Designing brighter near-infrared fluorescent proteins: insights from structural and biochemical studies.

scientific article published on 4 May 2017

Determination of two-photon photoactivation rates of fluorescent proteins

scientific article published on September 2013

Direct multiplex imaging and optogenetics of Rho GTPases enabled by near-infrared FRET

scientific article published on 23 April 2018

Directed molecular evolution to design advanced red fluorescent proteins

scientific article

Distinct effects of guanidine thiocyanate on the structure of superfolder GFP.

scientific article

Engineering ESPT Pathways Based on Structural Analysis of LSSmKate Red Fluorescent Proteins with Large Stokes Shift

scientific article

Engineering of a monomeric green-to-red photoactivatable fluorescent protein induced by blue light

scientific article published on 19 March 2006

Engineering of bacterial phytochromes for near-infrared imaging, sensing, and light-control in mammals

scientific article published on 29 January 2013

Erratum: Photoactivatable mCherry for high-resolution two-color fluorescence microscopy

scholarly article published in Nature Methods

Expression of recombinant GFP-actin fusion protein in the methylotrophic yeast

scientific article published on 01 March 2003

Extended Stokes Shift in Fluorescent Proteins: Chromophore–Protein Interactions in a Near-Infrared TagRFP675 Variant

scientific article

Far-red fluorescent protein excitable with red lasers for flow cytometry and superresolution STED nanoscopy.

scientific article published on July 2010

Far-red fluorescent tag for protein labelling

scientific article

Far-red fluorescent tags for protein imaging in living tissues

scientific article

Far-red light photoactivatable near-infrared fluorescent proteins engineered from a bacterial phytochrome

scientific article published on January 2013

Fast reversibly photoswitching red fluorescent proteins for live-cell RESOLFT nanoscopy

scientific article published on 09 July 2018

Fluorescent Biosensors for Neurotransmission and Neuromodulation: Engineering and Applications

scientific article published on 23 October 2019

Fluorescent Proteins as Biomarkers and Biosensors: Throwing Color Lights on Molecular and Cellular Processes

scientific article published in August 2008

Focusing light inside live tissue using reversibly switchable bacterial phytochrome as a genetically encoded photochromic guide star

scientific article published on 12 December 2019

Green fluorescent proteins are light-induced electron donors

scientific article published on July 2009

Guide to red fluorescent proteins and biosensors for flow cytometry

scientific article

Hetero-oligomeric tagging diminishes non-specific aggregation of target proteins fused with Anthozoa fluorescent proteins.

scientific article published in April 2003

High stability of Discosoma DsRed as compared to Aequorea EGFP.

scientific article published in July 2003

Histone H3K4me3 Binding Is Required for the DNA Repair and Apoptotic Activities of ING1 Tumor Suppressor

scientific article

Imaging biological structures with fluorescence photoactivation localization microscopy

scientific article

In vivo photoswitchable flow cytometry for direct tracking of single circulating tumor cells

scientific article

In vivo tomographic imaging of deep-seated cancer using fluorescence lifetime contrast

scientific article

Innovation: Photoactivatable fluorescent proteins.

scientific article

Insight into the common mechanism of the chromophore formation in the red fluorescent proteins: the elusive blue intermediate revealed

scientific article published on 26 January 2012

Interaction of Biliverdin Chromophore with Near-Infrared Fluorescent Protein BphP1-FP Engineered from Bacterial Phytochrome.

scientific article published on 8 May 2017

Intravital imaging of metastatic behavior through a mammary imaging window.

scientific article

Introducing inducible fluorescent split cholesterol oxidase to mammalian cells.

scientific article published on 7 April 2017

Kinetics of actin unfolding induced by guanidine hydrochloride.

scientific article published in January 2002

Light control of RTK activity: from technology development to translational research

scientific article published on 07 September 2020

Membrane insertion of the FYVE domain is modulated by pH

scientific article

Minimal domain of bacterial phytochrome required for chromophore binding and fluorescence.

scientific article published on 18 December 2015

Modern fluorescent proteins and imaging technologies to study gene expression, nuclear localization, and dynamics.

scientific article

Modern fluorescent proteins: from chromophore formation to novel intracellular applications

scientific article published on November 2011

Molecular Basis of Spectral Diversity in Near-Infrared Phytochrome-Based Fluorescent Proteins

scientific article

Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2

scientific article (publication date: 6 July 2006)

Molecular mechanism of membrane targeting by the GRP1 PH domain

scientific article published on 9 May 2008

Monomeric fluorescent timers that change color from blue to red report on cellular trafficking

scientific article published on 11 January 2009

Monomeric red fluorescent proteins with a large Stokes shift

scientific article

Multicontrast photoacoustic in vivo imaging using near-infrared fluorescent proteins

scientific article

Multiparametric flow cytometry using near-infrared fluorescent proteins engineered from bacterial phytochromes

scientific article

Multiscale photoacoustic tomography using reversibly switchable bacterial phytochrome as a near-infrared photochromic probe

scientific article

Nanoscale imaging of molecular positions and anisotropies

scientific article

Natural photoreceptors as a source of fluorescent proteins, biosensors, and optogenetic tools.

scientific article

Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes in Neuroimaging

scientific article published on 7 October 2017

Near-Infrared Fluorescent Proteins, Biosensors, and Optogenetic Tools Engineered from Phytochromes

scientific article published on 12 April 2017

Near-Infrared Fluorescent Proteins: Multiplexing and Optogenetics across Scales

scientific article published on 23 July 2018

Near-infrared bioluminescent proteins for two-color multimodal imaging

scientific article

Near-infrared fluorescent proteins engineered from bacterial phytochromes

scientific article

Near-infrared fluorescent proteins for multicolor in vivo imaging

scientific article published on 16 June 2013

Near-infrared light-controlled gene expression and protein targeting in neurons and non-neuronal cells.

scientific article published on 21 February 2018

Near-infrared light-controlled systems for gene transcription regulation, protein targeting and spectral multiplexing.

scientific article published on 26 April 2018

Near-infrared optogenetic pair for protein regulation and spectral multiplexing.

scientific article

Neurotrophin receptor tyrosine kinases regulated with near-infrared light

New insight in protein-ligand interactions. 2. Stability and properties of two mutant forms of the D-galactose/D-glucose-binding protein from E. coli

scientific article

New lasers for flow cytometry: filling the gaps

scientific article published in September 2007

Obatoclax kills anaplastic thyroid cancer cells by inducing lysosome neutralization and necrosis

scientific article published on 30 April 2016

Optogenetic regulation of endogenous proteins

scientific article published on 30 January 2020

Orange Fluorescent Proteins: Structural Studies of LSSmOrange, PSmOrange and PSmOrange2

scientific article

Phenotypic heterogeneity of disseminated tumour cells is preset by primary tumour hypoxic microenvironments.

scientific article published on 23 January 2017

Photoacoustic and photothermal cytometry using photoswitchable proteins and nanoparticles with ultrasharp resonances

scientific article published on 01 August 2015

Photoacoustic and photothermal cytometry using photoswitchable proteins and nanoparticles with ultrasharp resonances.

scientific article published on 20 November 2013

Photoactivatable mCherry for high-resolution two-color fluorescence microscopy

scientific article

Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states

scientific article

Photocontrollable fluorescent proteins for superresolution imaging

scientific article

Photoswitchable cyan fluorescent protein for protein tracking

scientific article published on 24 October 2004

Photoswitchable red fluorescent protein with a large Stokes shift

scientific article

Publisher Correction: Direct multiplex imaging and optogenetics of Rho GTPases enabled by near-infrared FRET

scientific article published on 01 September 2018

Quad-mode functional and molecular photoacoustic microscopy

scientific article published in Scientific Reports

Red fluorescent protein with reversibly photoswitchable absorbance for photochromic FRET.

scientific article published on July 2010

Red fluorescent proteins: advanced imaging applications and future design

scientific article published on 31 July 2012

Reversibly switchable fluorescence microscopy with enhanced resolution and image contrast

scientific article

Rotational order–disorder structure of fluorescent protein FP480

scientific article

Sensitivity of superfolder GFP to ionic agents

scientific article

Setup and use of a two-laser multiphoton microscope for multichannel intravital fluorescence imaging

scientific article

Small near-infrared photochromic protein for photoacoustic multi-contrast imaging and detection of protein interactions in vivo.

scientific article published on 16 July 2018

Smallest near-infrared fluorescent protein evolved from cyanobacteriochrome as versatile tag for spectral multiplexing

scientific article published in Nature Communications

Solid state yellow and orange lasers for flow cytometry

scientific article

Structural Characterization of Acylimine-Containing Blue and Red Chromophores in mTagBFP and TagRFP Fluorescent Proteins

scientific article

Supercontinuum white light lasers for flow cytometry

scientific article

Superresolution imaging of multiple fluorescent proteins with highly overlapping emission spectra in living cells

scientific article

Synergy of photoacoustic and fluorescence flow cytometry of circulating cells with negative and positive contrasts.

scientific article

Targeting of the FYVE domain to endosomal membranes is regulated by a histidine switch

scientific article

The first mutant of the Aequorea victoria green fluorescent protein that forms a red chromophore

scientific article

The molecular properties and applications of Anthozoa fluorescent proteins and chromoproteins.

scientific article published on March 2004

The place of inactivated actin and its kinetic predecessor in actin folding-unfolding.

scientific article published in November 2002

The rotational order–disorder structure of the reversibly photoswitchable red fluorescent protein rsTagRFP

scientific article

Ultrafast excited-state dynamics and fluorescence deactivation of near-infrared fluorescent proteins engineered from bacteriophytochromes.

scientific article published on 6 August 2015

Understanding Blue-to-Red Conversion in Monomeric Fluorescent Timers and Hydrolytic Degradation of Their Chromophores

scientific article

Understanding the role of Arg96 in structure and stability of green fluorescent protein

scientific article

[Knotted proteins].

scientific article

moxDendra2: an inert photoswitchable protein for oxidizing environments

scientific article

moxMaple3: a Photoswitchable Fluorescent Protein for PALM and Protein Highlighting in Oxidizing Cellular Environments

scientific article published in Scientific Reports

pH-dependent binding of the Epsin ENTH domain and the AP180 ANTH domain to PI(4,5)P2-containing bilayers.

scientific article

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