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List of works by Yi Shi

A Bat-Derived Putative Cross-Family Recombinant Coronavirus with a Reovirus Gene

scientific article

A Genetic Variant in theSKIV2LGene Is Significantly Associated With Age-Related Macular Degeneration in a Han Chinese Population ⬇️

scientific article published on April 26, 2013

A broadly protective antibody that targets the flavivirus NS1 protein

scientific article published on 01 January 2021

A genome-wide meta-analysis identifies two novel loci associated with high myopia in the Han Chinese population ⬇️

scientific article published on February 12, 2013

A novel mutation in BBS7 gene causes Bardet-Biedl syndrome in a Chinese family

scientific article

A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro

scientific article published on 31 December 2020

A potent broad-spectrum protective human monoclonal antibody crosslinking two haemagglutinin monomers of influenza A virus

scientific article

A single amino acid at the hemagglutinin cleavage site contributes to the pathogenicity and neurovirulence of H5N1 influenza virus in mice ⬇️

scientific article

ABCB6 mutations cause ocular coloboma

scientific article

Adaptation of avian influenza A (H6N1) virus from avian to human receptor-binding preference

scientific article published on 4 May 2015

Alternate binding modes of anti-CRISPR viral suppressors AcrF1/2 to Csy surveillance complex revealed by cryo-EM structures

scientific article published on 2 June 2017

Amino acid 316 of hemagglutinin and the neuraminidase stalk length influence virulence of H9N2 influenza virus in chickens and mice

scientific article published on 26 December 2012

An Airborne Transmissible Avian Influenza H5 Hemagglutinin Seen at the Atomic Level ⬇️

scientific article published on May 2, 2013

An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism

scientific article published on 27 January 2016

An adenovirus serotype 2-vectored ebolavirus vaccine generates robust antibody and cell-mediated immune responses in mice and rhesus macaques.

scientific article

An association study of SERPING1 gene and age-related macular degeneration in a Han Chinese population

scientific article

An association study of the COL1A1 gene and high myopia in a Han Chinese population.

scientific article published on 24 December 2011

An autoimmune disease variant of IgG1 modulates B cell activation and differentiation

scientific article published in Science

An unexpected N-terminal loop in PD-1 dominates binding by nivolumab

scientific article published on 06 February 2017

Analysis of influenza virus receptor specificity using glycan-functionalized gold nanoparticles

scientific article published on 15 April 2014

Association between SKIV2L polymorphism rs429608 and age-related macular degeneration: A meta-analysis

scientific article

Association of IGF1 and IGF1R gene polymorphisms with high myopia in a Han Chinese population

scientific article published on 4 April 2016

Association of IGF1 polymorphism rs6214 with high myopia: A systematic review and meta-analysis

scientific article published on 31 January 2017

Association of catalase polymorphisms with primary open-angle glaucoma in a Chinese population

scientific article

Association study of candidate genes for susceptibility to Kashin-Beck disease in a Tibetan population

scientific article

Association study of genetic variants in eight genes/loci with type 2 diabetes in a Han Chinese population

scientific article

Association study of polymorphisms in selenoprotein genes and Kashin-Beck disease and serum selenium/iodine concentration in a Tibetan population

scientific article

Associations of 6p21.3 Region with Age-related Macular Degeneration and Polypoidal Choroidal Vasculopathy

scientific article published on 10 February 2016

Avian-to-Human Receptor-Binding Adaptation by Influenza A Virus Hemagglutinin H4.

scientific article

Bat-Derived Influenza Hemagglutinin H17 Does Not Bind Canonical Avian or Human Receptors and Most Likely Uses a Unique Entry Mechanism ⬇️

scientific article published on February 21, 2013

Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion

scientific article

Both Boceprevir and GC376 efficaciously inhibit SARS-CoV-2 by targeting its main protease

scientific article published on 04 September 2020

CARP is a potential tumor suppressor in gastric carcinoma and a single-nucleotide polymorphism in CARP gene might increase the risk of gastric carcinoma

scientific article

Contribution of intertwined loop to membrane association revealed by Zika virus full‐length NS1 structure

scientific article

Correction: An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism

scientific article published on 8 March 2016

Cryo-EM structure of the varicella-zoster virus A-capsid

scientific article published on 22 September 2020

Cryo-EM structures of MERS-CoV and SARS-CoV spike glycoproteins reveal the dynamic receptor binding domains

scientific article

Crystal Structure of the Interferon Gamma Receptor Alpha Chain from Chicken Reveals an Undetected Extra Helix Compared with the Human Counterparts

scientific article

Crystal Structure of the Marburg Virus Nucleoprotein Core Domain Chaperoned by a VP35 Peptide Reveals a Conserved Drug Target for Filovirus

scientific article published on 28 June 2017

Crystal clear: visualizing the intervention mechanism of the PD-1/PD-L1 interaction by two cancer therapeutic monoclonal antibodies

scientific article published on 4 November 2016

Crystal structure of the swine-origin A (H1N1)-2009 influenza A virus hemagglutinin (HA) reveals similar antigenicity to that of the 1918 pandemic virus ⬇️

scientific article published on June 4, 2010

Crystal structures of the two membrane-proximal Ig-like domains (D3D4) of LILRB1/B2: alternative models for their involvement in peptide-HLA binding ⬇️

scientific article published on August 17, 2013

Deinococcus radiodurans pprI expression enhances the radioresistance of eukaryotes

scientific article published on 16 March 2016

Dominant subtype switch in avian influenza viruses during 2016-2019 in China

scientific article published on 20 November 2020

Downregulated miR-451a as a feature of the plasma cfRNA landscape reveals regulatory networks of IL-6/IL-6R-associated cytokine storms in COVID-19 patients

scientific article published in 2021

Ebola Viral Glycoprotein Bound to Its Endosomal Receptor Niemann-Pick C1

scientific article

Effects of a Single Escape Mutation on T Cell and HIV-1 Co-adaptation

scientific article published on 25 May 2016

Enabling the 'host jump': structural determinants of receptor-binding specificity in influenza A viruses.

scientific article

Evaluation of MMP2 as a candidate gene for high myopia ⬇️

scientific article published on January 28, 2013

Evaluation of MYOC, ACAN, HGF, and MET as candidate genes for high myopia in a Han Chinese population

scientific article

Evaluation of four genetic variants in han chinese subjects with high myopia

scientific article

Evaluation of genome-wide susceptibility loci for high myopia in a Han Chinese population

scientific article published on 13 January 2017

Evaluation of the Association Between Common Genetic Variants Near the ABCA1 Gene and Primary Angle Closure Glaucoma in a Han Chinese Population

scientific article published on October 2015

Facile Solvothermal Synthesis of Flowerlike SnS2 Nanosheets for Enhanced Lithium Ion Storage Property

scientific article published in June 2016

Genetic association of COL1A1 polymorphisms with high myopia in Asian population: a Meta-analysis

scientific article

Genetic variants at 13q12.12 are associated with high myopia in the Han Chinese population

scientific article

Genetic variants in PVRL2-TOMM40-APOE region are associated with human longevity in a Han Chinese population

scientific article

H7N9: a low pathogenic avian influenza A virus infecting humans

scientific article published on 03 April 2014

Heteroepitaxial Writing of Silicon-on-Sapphire Nanowires

scientific article published on 14 November 2016

Highly restricted T-cell receptor repertoire in the CD8+ T-cell response against an HIV-1 epitope with a stereotypic amino acid substitution

scientific article published in March 2009

Identification of a novel MYOC mutation in a Chinese family with primary open-angle glaucoma

scientific article published on 19 June 2015

In silico characterization of the functional and structural modules of the hemagglutinin protein from the swine-origin influenza virus A (H1N1)-2009.

scientific article

In vitro assembly of Ebola virus nucleocapsid-like complex expressed in E. coli ⬇️

scientific article published on 20 September 2016

In-plane epitaxial growth of silicon nanowires and junction formation on Si(100) substrates

scientific article published on 30 October 2014

Inference of person-to-person transmission of COVID-19 reveals hidden super-spreading events during the early outbreak phase

scientific article published on 06 October 2020

Insights into Avian Influenza Virus Pathogenicity: the Hemagglutinin Precursor HA0 of Subtype H16 Has an Alpha-Helix Structure in Its Cleavage Site with Inefficient HA1/HA2 Cleavage ⬇️

scientific article published on September 19, 2012

Investigation on Epitaxial Lateral Overgrowth of InGaN/GaN Multi-Quantum-Well Nanowires

scientific article published on February 1, 2013

LILRA3 binds both classical and non-classical HLA class I molecules but with reduced affinities compared to LILRB1/LILRB2: structural evidence

scientific article published in 2011

Low-voltage, High-performance Organic Field-Effect Transistors Based on 2D Crystalline Molecular Semiconductors

scientific article published on 10 August 2017

Molecular Basis of the Receptor Binding Specificity Switch of the Hemagglutinins from both the 1918 and 2009 Pandemic Influenza A Viruses by a D225G Substitution

scientific article

Molecular basis of antibody-mediated neutralization and protection against flavivirus

scientific article published on 7 September 2016

Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26.

scientific article

Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus

scientific article published on December 2016

Mutation spectrum of CYP1B1 in Chinese patients with primary open-angle glaucoma.

scientific article published on 19 December 2014

Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus

scientific article published on 01 April 2019

New Virus, New Challenge

scientific article published on 20 May 2020

Novel Compound Heterozygous CBS Mutations Cause Homocystinuria in a Han Chinese Family

scientific article

Novel cyclo-peptides inhibit Ebola pseudotyped virus entry by targeting primed GP protein

scientific article published on 27 April 2018

Nα-terminal acetylation for T cell recognition: molecular basis of MHC class I-restricted nα-acetylpeptide presentation

scientific article

Operating principles of in-plane silicon nanowires at simple step-edges

scientific article published in March 2015

Origin and diversity of novel avian influenza A H7N9 viruses causing human infection: phylogenetic, structural, and coalescent analyses

scientific article (publication date: June 2013)

Origin and molecular characterization of the human-infecting H6N1 influenza virus in Taiwan

scientific article

Peculiar Magnetotransport Features of Ultranarrow Graphene Nanoribbons under High Magnetic Field

scientific article

Plasticity of human CD8αα binding to peptide–HLA-A*2402 ⬇️

scientific article published on June 6, 2011

Potent neutralizing monoclonal antibodies against Ebola virus infection

scientific article published on 16 May 2016

Protein expression, crystallization and preliminary X-ray crystallographic analysis of chicken interferon-γ receptor α chain ⬇️

scientific article published on December 24, 2011

Remarkably similar CTLA-4 binding properties of therapeutic ipilimumab and tremelimumab antibodies

scientific article published on 19 May 2017

Ribavirin is effective against drug-resistant H7N9 influenza virus infections

scientific article published on 18 July 2016

Scalable Alignment of CdS Nanowires Based on Efficient Roll-On Transfer Technique ⬇️

scientific article published on June 1, 2013

Selective inhibition of Ebola entry with selective estrogen receptor modulators by disrupting the endolysosomal calcium

scientific article published on 24 January 2017

Single nucleotide polymorphisms at the TRAF1/C5 locus are associated with rheumatoid arthritis in a Han Chinese population ⬇️

scientific article published on April 14, 2011

Solvothermal Synthesis of Indium Telluride Nanowires and Its Photoelectrical Property

scientific article published in May 2015

Structural Insights into the Niemann-Pick C1 (NPC1)-Mediated Cholesterol Transfer and Ebola Infection

scientific article

Structural and functional analysis of an anchorless fibronectin-binding protein FBPS from Gram-positive bacterium Streptococcus suis

scientific article

Structural basis for preferential avian receptor binding by the human-infecting H10N8 avian influenza virus

scientific article

Structural basis of anti-PD-L1 monoclonal antibody avelumab for tumor therapy

scientific article

Structural basis of collagen recognition by human osteoclast-associated receptor and design of osteoclastogenesis inhibitors

scientific article published on 7 January 2016

Structural basis of nectin-1 recognition by pseudorabies virus glycoprotein D

scientific article

Structural immunology and crystallography help immunologists see the immune system in action: how T and NK cells touch their ligands

scientific article published on June 2009

Structural insight into RNA synthesis by influenza D polymerase

scientific article published on 17 June 2019

Structural insight into arenavirus replication machinery

scientific article published on 18 March 2020

Structural vaccinology: structure-based design of influenza A virus hemagglutinin subtype-specific subunit vaccines ⬇️

scientific article published on January 10, 2012

Structure and Receptor Binding Specificity of Hemagglutinin H13 from Avian Influenza A Virus H13N6 ⬇️

scientific article published on June 12, 2013

Structure and receptor-binding properties of an airborne transmissible avian influenza A virus hemagglutinin H5 (VN1203mut)

scientific article

Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection

scientific article

Structure of monkeypox virus DNA polymerase holoenzyme

scientific article published on 6 January 2023

Structure of the S1 subunit C-terminal domain from bat-derived coronavirus HKU5 spike protein

scientific article published on 19 April 2017

Structure-function analysis of neutralizing antibodies to H7N9 influenza from naturally infected humans

scientific article published on 26 November 2018

Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses

scientific article

Structures of Zika Virus E & NS1: Relations with Virus Infection and Host Immune Responses.

scientific article published in January 2018

Structures of human-infecting Thogotovirus fusogens support a common ancestor with insect baculovirus

scientific article published on 4 October 2017

Structures of phlebovirus glycoprotein Gn and identification of a neutralizing antibody epitope

scientific article

Structures of the Zika Virus Envelope Protein and Its Complex with a Flavivirus Broadly Protective Antibody

scientific article

Structures of the four Ig-like domain LILRB2 and the four-domain LILRB1 and HLA-G1 complex

scientific article published on 04 July 2019

Superimposed epitopes restricted by the same HLA molecule drive distinct HIV-specific CD8+ T cell repertoires

scientific article published on 4 June 2014

TCRklass: a new K-string-based algorithm for human and mouse TCR repertoire characterization

scientific article published on 17 November 2014

The 2009 pandemic H1N1 neuraminidase N1 lacks the 150-cavity in its active site

scientific article

The NS1 gene from bat-derived influenza-like virus H17N10 can be rescued in influenza A PR8 backbone

scientific article published on 23 May 2016

The crystal structure of Zika virus NS5 reveals conserved drug targets

scientific article (publication date: 2 March 2017)

The effect of whey protein on viral infection and replication of SARS-CoV-2 and pangolin coronavirus in vitro ⬇️

scientific article published on 24 November 2020

Zika virus NS1 structure reveals diversity of electrostatic surfaces among flaviviruses

scientific article

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