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List of works by David M Umbach

A comprehensive genomic pan-cancer classification using The Cancer Genome Atlas gene expression data

scientific article

A hybrid design: case-parent triads supplemented by control-mother dyads

scientific article

A longitudinal study of estrogen-responsive tissues and hormone concentrations in infants fed soy formula.

scientific article published in March 2018

A random-periods model for expression of cell-cycle genes.

scientific article

A response to information criterion-based clustering with order-restricted candidate profiles in short time-course microarray experiments

scientific article published on 22 December 2009

A sibling-augmented case-only approach for assessing multiplicative gene-environment interactions

scientific article published on 20 October 2011

APE1 genotype and risk of bladder cancer: evidence for effect modification by smoking

scientific article published in June 2006

Accurate anchoring alignment of divergent sequences

scientific article published on 13 November 2005

Amyotrophic lateral sclerosis, lead, and genetic susceptibility: polymorphisms in the delta-aminolevulinic acid dehydratase and vitamin D receptor genes

journal article published in 2003

Analytical and statistical methods to evaluate microsatellite allelic imbalance in small amounts of DNA.

scientific article

Antimutagenicity of cinnamaldehyde and vanillin in human cells: Global gene expression and possible role of DNA damage and repair

scientific article

Application of the GA/KNN method to SELDI proteomics data

scientific article

Assessing Candidate Gene nsSNPs for Phenotypic Differences in Double-Strand Break Repair Using Radiation-Induced gammaH2A.X Foci

scientific article

Association between blood lead and the risk of amyotrophic lateral sclerosis

scientific article

Association of lead exposure with survival in amyotrophic lateral sclerosis

scientific article

Asymmetry in family history implicates nonstandard genetic mechanisms: application to the genetics of breast cancer

scientific article

Attention-Deficit/Hyperactivity Disorder (ADHD): Interaction between socioeconomic status and parental history of ADHD determines prevalence

scientific article published on 12 August 2017

Blood lead, bone turnover, and survival in amyotrophic lateral sclerosis

journal article published in 2017

Blood levels of trace metals and amyotrophic lateral sclerosis

journal article published in 2016

Body mass index and amyotrophic lateral sclerosis: a study of US military veterans

journal article published in 2017

CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression data

scientific article published on 02 December 2019

Case-sibling studies that acknowledge unstudied parents and permit the inclusion of unmatched individuals

scientific article published on 17 December 2012

Characterization of constitutive CTCF/cohesin loci: a possible role in establishing topological domains in mammalian genomes ⬇️

scientific article published on August 14, 2013

Chemical predictors of wheeze among farmer pesticide applicators in the Agricultural Health Study

scientific article

Chronic bronchitis among nonsmoking farm women in the Agricultural Health Study

journal article published in 2007

DNA repair gene XRCC3 codon 241 polymorphism, its interaction with smoking and XRCC1 polymorphisms, and bladder cancer risk.

scientific article published in September 2002

Diesel exhaust, solvents, and other occupational exposures as risk factors for wheeze among farmers

scientific article published on 07 April 2004

Dietary fat intake and risk for Parkinson's disease

journal article published in 2014

Dietary fat intake, pesticide use, and Parkinson's disease

scientific article published on October 2013

Disentangling pooled triad genotypes for association studies

scientific article

Early-life farm exposures and adult asthma and atopy in the Agricultural Lung Health Study

journal article published in 2017

Efficiently identifying genome-wide changes with next-generation sequencing data ⬇️

scientific article published on July 29, 2011

Enhanced mutagenesis of Salmonella tester strains due to deletion of genes other than uvrB.

scientific article published in October 2007

Exacerbation of symptoms in agricultural pesticide applicators with asthma

journal article published in 2014

Exposures Related to House Dust Microbiota in a U.S. Farming Population.

scientific article published in June 2018

Factors associated with dream enacting behaviors among US farmers

Family-based gene-by-environment interaction studies: revelations and remedies

scientific article

Gene selection and clustering for time-course and dose-response microarray experiments using order-restricted inference

scientific article published on May 2003

Genetic modification of the association of paraquat and Parkinson's disease

scientific article

Global DNA methylation and one-carbon metabolism gene polymorphisms and the risk of breast cancer in the Sister Study.

scientific article published on 15 October 2013

Head injury and amyotrophic lateral sclerosis

scientific article

Head injury, α-synuclein Rep1, and Parkinson's disease

scientific article published on January 2012

High Pesticide Exposure Events and Olfactory Impairment among U.S. Farmers

scientific article published in 2019

House dust endotoxin levels are associated with adult asthma in a U.S. farming population

journal article published in 2017

IUTA: a tool for effectively detecting differential isoform usage from RNA-Seq data.

scientific article

Identification of risk-related haplotypes with the use of multiple SNPs from nuclear families

scientific article

Incident thyroid disease in female spouses of private pesticide applicators.

scientific article published on 13 June 2018

Inhibition of fried meat-induced colorectal DNA damage and altered systemic genotoxicity in humans by crucifera, chlorophyllin, and yogurt

scientific article

Inhibition of spontaneous mutagenesis by vanillin and cinnamaldehyde in Escherichia coli: Dependence on recombinational repair

scientific article

Lead exposure and amyotrophic lateral sclerosis

scientific article published in May 2002

Lifetime organophosphorous insecticide use among private pesticide applicators in the Agricultural Health Study

journal article published in 2012

Military service, deployments, and exposures in relation to amyotrophic lateral sclerosis etiology

journal article published in 2016

Military service, deployments, and exposures in relation to amyotrophic lateral sclerosis survival

scientific article published on 10 October 2017

Mini-and microsatellite mutations in children from Chernobyl accident cleanup workers

scientific article published in April 2004

Modification of the association between lead exposure and amyotrophic lateral sclerosis by iron and oxidative stress related gene polymorphisms

scientific article published on 8 October 2014

Modifying the response labels of an ADHD teacher rating scale: psychometric and epidemiologic implications

scientific article published in November 2007

Mortality in the Agricultural Health Study, 1993-2007

journal article published in 2011

Mutagenicity, stable DNA adducts, and abasic sites induced in Salmonella by phenanthro[3,4-b]- and phenanthro[4,3-b]thiophenes, sulfur analogs of benzo[c]phenanthrene

scientific article

Mutations in tetranucleotide repeats following DNA damage depend on repeat sequence and carcinogenic agent.

scientific article published in November 2002

No association between DNA repair gene XRCC1 and amyotrophic lateral sclerosis.

scientific article

No association between SOD2 or NQO1 genotypes and risk of bladder cancer

scientific article

Nonmotor symptoms and Parkinson disease in United States farmers and spouses

scientific article published on 27 September 2017

Occupational pesticide use and self-reported olfactory impairment in US farmers

scientific article published on 23 October 2020

Optimized mixed Markov models for motif identification

scientific article

Overall and cause-specific mortality in a cohort of farmers and their spouses

scientific article published on 01 September 2019

Patterns of pesticide use and their determinants among wives of farmer pesticide applicators in the Agricultural Health Study

scientific article published on 01 August 2004

Peptidoglycan recognition protein genes and risk of Parkinson's disease

scientific article

Pesticide Use and Age-Related Macular Degeneration in the Agricultural Health Study

scientific article published on 19 July 2017

Pesticide Use and Incident Hypothyroidism in Pesticide Applicators in the Agricultural Health Study

scientific article published on 01 September 2018

Pesticide exposure and amyotrophic lateral sclerosis

scientific article

Pesticide exposure and depression among male private pesticide applicators in the Agricultural Health Study

journal article published in 2014

Pesticide use and chronic bronchitis among farmers in the Agricultural Health Study

journal article published in 2007

Pesticide use and fatal injury among farmers in the Agricultural Health Study

journal article published in 2013

Pesticide use and incident Parkinson's disease in a cohort of farmers and their spouses

scientific article published on 10 September 2020

Pesticide use and incident diabetes among wives of farmers in the Agricultural Health Study

scientific article

Pesticide use and incident hyperthyroidism in farmers in the Agricultural Health Study

scientific article published on 25 February 2019

Pesticides and adult respiratory outcomes in the agricultural health study

scientific article published in September 2006

Pesticides and atopic and nonatopic asthma among farm women in the Agricultural Health Study

journal article published in 2008

Pesticides and other agricultural factors associated with self-reported farmer's lung among farm residents in the Agricultural Health Study

journal article published in 2007

Pesticides are associated with allergic and non-allergic wheeze among male farmers

journal article published in 2017

Pesticides associated with wheeze among commercial pesticide applicators in the Agricultural Health Study

scientific article published on 12 April 2006

Pooled exposure assessment for matched case-control studies

scientific article

Potential sex differences in nonmotor symptoms in early drug-naive Parkinson disease

scientific article published on 29 April 2015

Prevalence of medication treatment for attention deficit-hyperactivity disorder among elementary school children in Johnston County, North Carolina

scientific article published in February 2002

Protective glove use and hygiene habits modify the associations of specific pesticides with Parkinson's disease

scientific article

Putative genomic characteristics of BRAF V600K versus V600E cutaneous melanoma

scientific article published on 28 August 2017

Re.: "Genetic association and gene-environment interaction: a new method for overcoming the lack of exposure information in controls".

scientific article published on 10 May 2011

Respiratory disease in United States farmers

journal article published in 2014

Retinal degeneration and other eye disorders in wives of farmer pesticide applicators enrolled in the agricultural health study

scientific article published in June 2005

Rotenone, paraquat, and Parkinson's disease

scientific article

Size of testes, ovaries, uterus and breast buds by ultrasound in healthy full-term neonates ages 0-3 days

scientific article

Sleep apnea and pesticide exposure in a study of US farmers

journal article published in 2018

Smoking is associated with increased telomerase activity in short-term cultures of human bronchial epithelial cells

scientific article

Statins, plasma cholesterol, and risk of Parkinson's disease: a prospective study

scientific article

Suicide and pesticide use among pesticide applicators and their spouses in the agricultural health study

scientific article

T-KDE: a method for genome-wide identification of constitutive protein binding sites from multiple ChIP-seq data sets

scientific article

Testing haplotype-environment interactions using case-parent triads

scientific article

The Prevalence of ADHD in a Population-Based Sample

scientific article

The shifting subtypes of ADHD: classification depends on how symptom reports are combined

scientific article published on 18 March 2008

Toward predicting metastatic progression of melanoma based on gene expression data

scientific article

Using case-parent triads to estimate relative risks associated with a candidate haplotype

scientific article published on 25 March 2009

Using parental phenotypes in case-parent studies

scientific article published on 23 June 2015

Using risk-based sampling to enrich cohorts for endpoints, genes, and exposures

scientific article

VEGF promoter haplotype and Amyotrophic Lateral Sclerosis (ALS)

journal article published in 2004

Workplace exposures and the risk of amyotrophic lateral sclerosis

scientific article

coMOTIF: a mixture framework for identifying transcription factor and a coregulator motif in ChIP-seq data

scientific article

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