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List of works by José B Pereira-Leal

A bioinformatics classifier and database for heme-copper oxygen reductases.

scientific article

An Exponential Core in the Heart of the Yeast Protein Interaction Network

scientific article published on 20 October 2004

Are There Rab GTPases in Archaea?

scientific article published on 31 March 2016

Aurora at the pole and equator: overlapping functions of Aurora kinases in the mitotic spindle

scientific article

Bioinformatic approaches to identifying and classifying Rab proteins.

scientific article published on January 2015

Bioinformatics projects supporting life-sciences learning in high schools

scientific article (publication date: 2014)

CYR61 and TAZ Upregulation and Focal Epithelial to Mesenchymal Transition May Be Early Predictors of Barrett's Esophagus Malignant Progression.

scientific article

Classification schemes for protein structure and function.

scientific article

Coiled-coil length: Size does matter.

scientific article published on 21 September 2015

Comparative genomics of trypanosomatid parasitic protozoa

scientific article (publication date: 15 July 2005)

Detection of functional modules from protein interaction networks.

scientific article published in January 2004

Does Hypoxic Response Mediate Primary Resistance to Sunitinib in Untreated Locally Advanced Breast Cancer?

scientific article

Evolution and dynamics of protein interactions and networks.

scientific article published on 28 April 2008

Evolution of intracellular compartmentalization.

scientific article

Evolution of protein complexes by duplication of homomeric interactions

scientific article published on January 2007

Evolution of the Rab family of small GTP-binding proteins

scientific article (publication date: 2 November 2001)

Evolutionary cell biology: two origins, one objective

scientific article

Evolutionary patterns in coiled-coils.

scientific article

Gene Tree Affects Inference of Sites Under Selection by the Branch-Site Test of Positive Selection

scientific article published on January 2015

Genetic Competence Drives Genome Diversity in Bacillus subtilis

scientific article

Genome of a Gut Strain of Bacillus subtilis.

scientific article published on January 2013

Gut Microbiota Diversity and C-Reactive Protein Are Predictors of Disease Severity in COVID-19 Patients

scientific article published on 19 July 2021

Hope for GWAS: relevant risk genes uncovered from GWAS statistical noise.

scientific article

Loss of genetic redundancy in reductive genome evolution.

scientific article

Mechanisms underlying the dual-mode regulation of microtubule dynamics by Kip3/kinesin-8.

scientific article

Novel specificities emerge by stepwise duplication of functional modules.

scientific article

Prenylation of Rab GTPases: molecular mechanisms and involvement in genetic disease.

scientific article published in June 2001

RAG Recombinase as a Selective Pressure for Genome Evolution

scientific article

Rabifier2: an improved bioinformatic classifier of Rab GTPases.

scientific article

Single choroideremia gene in nonmammalian vertebrates explains early embryonic lethality of the zebrafish model of choroideremia.

scientific article

Staphylococcus aureus Survives with a Minimal Peptidoglycan Synthesis Machine but Sacrifices Virulence and Antibiotic Resistance.

scientific article published on 7 May 2015

Stepwise evolution of the centriole-assembly pathway.

scientific article published on 14 April 2010

The Ypt/Rab family and the evolution of trafficking in fungi

scientific article published on 27 November 2007

The origins and evolution of functional modules: lessons from protein complexes

scientific article

The superfamily of heme-copper oxygen reductases: types and evolutionary considerations.

scientific article published on 6 October 2011

The vertebrate Hef ortholog is a component of the Fanconi anemia tumor-suppressor pathway.

scientific article published on 21 August 2005

inTB - a data integration platform for molecular and clinical epidemiological analysis of tuberculosis.

scientific article

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