Search filters

List of works by Ronald Harris

345: Novel insights on molecular targets of environmental exposures during pregnancy using placental multiomics integration

A global catalog of whole-genome diversity from 233 primate species

A maternal high-fat diet modulates fetal SIRT1 histone and protein deacetylase activity in nonhuman primates

scientific article

A nonhuman primate model of inherited retinal disease

scientific article published on 22 January 2019

A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome

scientific article

Allele-specific epigenome maps reveal sequence-dependent stochastic switching at regulatory loci

scientific article published in Science

Centromere remodeling in Hoolock leuconedys (Hylobatidae) by a new transposable element unique to the gibbons.

scientific article published on 16 May 2012

Characterization of single-nucleotide variation in Indian-origin rhesus macaques (Macaca mulatta)

scientific article

Colonic Mucosal Epigenome and Microbiome Development in Children and Adolescents

scientific article

Colonic mucosal DNA methylation, immune response, and microbiome patterns in Toll-like receptor 2-knockout mice

scientific article

Comparative Genomic Analyses of the Human NPHP1 Locus Reveal Complex Genomic Architecture and Its Regional Evolution in Primates.

scientific article published on 7 December 2015

Comparative molecular genomic analyses of a spontaneous rhesus macaque model of mismatch repair-deficient colorectal cancer

scientific article published on 21 April 2022

Comparison and quantitative verification of mapping algorithms for whole-genome bisulfite sequencing.

scientific article

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications.

scientific article

Confounding by repetitive elements and CpG islands does not explain the association between hypomethylation and genomic instability

scientific article

Construction of a new chromosome-scale, long-read reference genome assembly for the Syrian hamster, Mesocricetus auratus

scientific article published on 01 May 2022

Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta)

scientific article published on 11 May 2020

DNA Methylation Profiling in Inflammatory Bowel Disease Provides New Insights into Disease Pathogenesis

scientific article published on 28 September 2015

DNA methylation-associated colonic mucosal immune and defense responses in treatment-naïve pediatric ulcerative colitis.

scientific article

Designing new microsatellite markers for linkage and population genetic analyses in rhesus macaques and other nonhuman primates

scientific article published on 28 September 2006

Epigenomic footprints across 111 reference epigenomes reveal tissue-specific epigenetic regulation of lincRNAs.

scientific article

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

scientific article

Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution

scientific article (publication date: June 2009)

Evolutionary genetics and implications of small size and twinning in callitrichine primates

scientific article (publication date: 28 January 2014)

Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood

scientific article

GASZ is essential for male meiosis and suppression of retrotransposon expression in the male germline

scientific journal article

Genetic diversity of 1,845 rhesus macaques improves genetic variation interpretation and identifies disease models

scientific article published in 2024

Genome-wide peripheral blood leukocyte DNA methylation microarrays identified a single association with inflammatory bowel diseases

scientific article published on 29 March 2012

Genomic Variants Associated with Resistance to High Fat Diet Induced Obesity in a Primate Model.

scientific article

Genomic hypomethylation in the human germline associates with selective structural mutability in the human genome

scientific article

Gibbon genome and the fast karyotype evolution of small apes

scientific article

Human metastable epiallele candidates link to common disorders

scientific article published on 15 January 2013

Human-specific changes of genome structure detected by genomic triangulation

scientific article

Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus).

scientific article published on 16 November 2017

Identification of Common Genetic Variants Influencing Spontaneous Dizygotic Twinning and Female Fertility

scientific article published on 27 April 2016

Improved full-length killer cell immunoglobulin-like receptor transcript discovery in Mauritian cynomolgus macaques

scientific article published on 25 March 2017

In utero exposure to a maternal high-fat diet alters the epigenetic histone code in a murine model

scientific article

Integrative analysis of 111 reference human epigenomes

scientific article (publication date: 19 February 2015)

Intermediate DNA methylation is a conserved signature of genome regulation

scientific article

Loss of n-6 fatty acid induced pediatric obesity protects against acute murine colitis

scientific article published on 22 April 2015

MHC genotyping from rhesus macaque exome sequences

scientific article published on 18 July 2019

Maternal methyl-donor supplementation induces prolonged murine offspring colitis susceptibility in association with mucosal epigenetic and microbiomic changes

scientific article

MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing

scientific article

Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massively parallel DNA sequencing

scientific article

Pedigree reconstruction and distant pairwise relatedness estimation from genome sequence data: A demonstration in a population of rhesus macaques (macaca mulatta)

scientific article published on 01 January 2021

Polymorphic microsatellite loci for the common marmoset (Callithrix jacchus) designed using a cost- and time-efficient method

scientific article

Pooled genomic indexing of rhesus macaque

scientific article

Primary Human Placental Trophoblasts are Permissive for Zika Virus (ZIKV) Replication

scientific article (publication date: 27 January 2017)

Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression

scientific article published on 03 December 2020

Proinflammatory role for let-7 microRNAS in experimental asthma

scientific article

Reduced meiotic recombination in rhesus macaques and the origin of the human recombination landscape

scientific article published on 25 August 2020

Reproductive Longevity Predicts Mutation Rates in Primates

scientific article published on 27 September 2018

Role of Maternal Serum Alpha-Fetoprotein and Ultrasonography in Contemporary Detection of Spina Bifida

scientific article published on 2 September 2015

Season of conception in rural gambia affects DNA methylation at putative human metastable epialleles

scientific article

Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility

scientific article

Serial fecal microbiota transplantation alters mucosal gene expression in pediatric ulcerative colitis

scientific article published on April 2015

Sooty mangabey genome sequence provides insight into AIDS resistance in a natural SIV host

scientific article published in January 2018

Spontaneous Spongiform Brainstem Degeneration in a Young Mouse Lemur (Microcebus murinus) with Conspicuous Behavioral, Motor, Growth, and Ocular Pathologies.

scientific article published on 28 November 2018

Structural and transcriptomic response to antenatal corticosteroids in an Erk3-null mouse model of respiratory distress

scientific article published on 30 April 2016

The common marmoset genome provides insight into primate biology and evolution

scientific article

The comparative genomics and complex population history of baboons

scientific article published on 30 January 2019

The landscape of tolerated genetic variation in humans and primates

The population genomics of rhesus macaques (Macaca mulatta) based on whole-genome sequences

scientific article

Transcriptome profiling of microRNA by Next-Gen deep sequencing reveals known and novel miRNA species in the lipid fraction of human breast milk

scientific article

Unusual sequence characteristics of human chromosome 19 are conserved across 11 nonhuman primates

scientific article published on 27 February 2020

Paulina is supported by:

About Paulina

Help