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List of works by Naoyuki Sugiyama

Algal Protein Kinase, Triacylglycerol Accumulation Regulator 1, Modulates Cell Viability and Gametogenesis in Carbon/Nitrogen-Imbalanced Conditions

scientific article published on 01 April 2019

Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column.

scientific article

Binding of diarrheic shellfish poisoning toxins to okadaic acid binding proteins purified from the sponge Halichondria okadai ⬇️

scientific article published on August 27, 2010

Blue light and CO2 signals converge to regulate light-induced stomatal opening

scientific article published on 3 November 2017

Calcium-dependent protein kinase 16 phosphorylates and activates the aquaporin PIP2;2 to regulate reversible flower opening in <i>Gentiana scabra</i>

scientific article published in 2022

Characterization of kinase inhibitors using different phosphorylation states of colony stimulating factor-1 receptor tyrosine kinase.

scientific article

Chemical dephosphorylation for identification of multiply phosphorylated peptides and phosphorylation site determination.

scientific article published on August 2010

Comparative proteomics of Helicobacter pylori strains reveals geographical features rather than genomic variations

scientific article published on 20 January 2019

Correction: LATS1 and LATS2 phosphorylate CDC26 to modulate assembly of the tetratricopeptide repeat subcomplex of APC/C.

scientific article published on 10 April 2015

Detection of Rap1A as a yessotoxin binding protein from blood cell membranes

scientific article published on 18 September 2010

Energy-loss near-edge structure (ELNES) and first-principles calculation of electronic structure of nickel silicide systems

scientific article published on 07 June 2007

Extended Coverage of Singly and Multiply Phosphorylated Peptides from a Single Titanium Dioxide Microcolumn.

scientific article published on 24 September 2015

Human mesenchymal stem cell-engineered hepatic cell sheets accelerate liver regeneration in mice

scientific article published on 10 November 2015

Human proteome analysis by using reversed phase monolithic silica capillary columns with enhanced sensitivity.

scientific article

Identification of Endogenous Kinase Substrates by Proximity Labeling Combined with Kinase Perturbation and Phosphorylation Motifs

scientific article published on 27 June 2021

Identifications of Putative PKA Substrates with Quantitative Phosphoproteomics and Primary-Sequence-Based Scoring.

scientific article published on 13 March 2017

Inhibition of endocytic vesicle fusion by Plk1-mediated phosphorylation of vimentin during mitosis

scientific article published on 25 October 2013

Integrative features of the yeast phosphoproteome and protein-protein interaction map

scientific article

Isolation and characterization of okadaic acid binding proteins from the marine sponge Halichondria okadai

scientific article published on 15 September 2007

LATS1 and LATS2 phosphorylate CDC26 to modulate assembly of the tetratricopeptide repeat subcomplex of APC/C.

scientific article

LATS1/WARTS phosphorylates MYPT1 to counteract PLK1 and regulate mammalian mitotic progression

scientific article

Large-scale Discovery of Substrates of the Human Kinome

scientific article published on 19 July 2019

Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants.

scientific article published on 13 May 2010

Large-scale identification of phosphorylation sites for profiling protein kinase selectivity.

scientific article published on 4 June 2014

Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.

scientific article published on 6 May 2008

Large-scale profiling of protein kinases for cellular signaling studies by mass spectrometry and other techniques

scientific article published on 27 May 2016

Mass spectrum sequential subtraction speeds up searching large peptide MS/MS spectra datasets against large nucleotide databases for proteogenomics.

scientific article

Metabolomic profiling of lung and prostate tumor tissues by capillary electrophoresis time-of-flight mass spectrometry.

scientific article published on 2 November 2012

Microscale phosphoproteome analysis of 10,000 cells from human cancer cell lines.

scientific article

Muscle-specific Knock-out of NUAK Family SNF1-like Kinase 1 (NUAK1) Prevents High Fat Diet-induced Glucose Intolerance ⬇️

scientific article published on March 14, 2012

PCTK1 regulates integrin-dependent spindle orientation via protein kinase A regulatory subunit KAP0 and myosin X. ⬇️

scientific article published on 20 January 2015

Phosphopeptide enrichment by aliphatic hydroxy acid-modified metal oxide chromatography for nano-LC-MS/MS in proteomics applications

scientific article published on 23 February 2007

Phosphoproteome analysis of formalin-fixed and paraffin-embedded tissue sections mounted on microscope slides.

scientific article

Phosphoproteomic analysis of Rhodopseudomonas palustris reveals the role of pyruvate phosphate dikinase phosphorylation in lipid production.

scientific article published on 15 October 2012

Phosphoproteomic profiling reveals ABA-responsive phosphosignaling pathways in Physcomitrella patens.

scientific article

Phosphorylation of BLUS1 kinase by phototropins is a primary step in stomatal opening.

scientific article published on January 2013

Prediction of liquid chromatographic retention times of peptides generated by protease digestion of the Escherichia coli proteome using artificial neural networks.

scientific article published in December 2006

Quantitative proteome and phosphoproteome analyses of cultured cells based on SILAC labeling without requirement of serum dialysis.

scientific article

Shotguns in the front line: phosphoproteomics in plants.

scientific article published on 28 October 2011

Systematic profiling of the bacterial phosphoproteome reveals bacterium-specific features of phosphorylation.

scientific article published on 15 September 2015

Temporal profiling of lapatinib-suppressed phosphorylation signals in EGFR/HER2 pathways.

scientific article published on 10 September 2012

The Rice Proteogenomics Database OryzaPG-DB: Development, Expansion, and New Features

scientific article published on 2 April 2012

The jPOST environment: an integrated proteomics data repository and database

scientific article published on 01 January 2019

Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis.

scientific article published on 29 September 2009

Uncovering Phosphorylation-Based Specificities through Functional Interaction Networks

scientific article

jPOSTrepo: an international standard data repository for proteomes

scientific article

mTORC1 is essential for leukemia propagation but not stem cell self-renewal ⬇️

scientific article published on May 24, 2012

p38-Mediated phosphorylation of Eps15 endocytic adaptor protein

scientific article published on 21 November 2013

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