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List of works by Willy Wriggers

2D fast rotational matching for image processing of biophysical data.

scientific article published in October 2003

A Balanced Approach to Adaptive Probability Density Estimation

scientific article published on 25 April 2017

Actin depolymerizing factor stabilizes an existing state of F-actin and can change the tilt of F-actin subunits

scientific article

Atomic-Level Characterization of the Structural Dynamics of Proteins ⬇️

scientific article (publication date: 15 October 2010)

Automated Event Detection and Activity Monitoring in Long Molecular Dynamics Simulations

article

Automated tracing of filaments in 3D electron tomography reconstructions using Sculptor and Situs.

scientific article

Bend-twist-stretch model for coarse elastic network simulation of biomolecular motion.

scientific article

Biomolecular pleiomorphism probed by spatial interpolation of coarse models.

scientific article

Cofilin and gelsolin segment-1: molecular dynamics simulation and biochemical analysis predict a similar actin binding mode.

scientific article published in October 1998

Comparing an Atomic Model or Structure to a Corresponding Cryo-electron Microscopy Image at the Central Axis of a Helix.

scientific article

Comparison of an Atomic Model and Its Cryo-EM Image at the Central Axis of a Helix

scientific article

Computing Spatiotemporal Heat Maps of Lipid Electropore Formation: A Statistical Approach

scientific article

Conformational Differences in ATP- and ADP-bound G-actin: A Molecular Dynamics Study

article by Willy Wriggers et al published 1 April 1995 in Biophysical Journal

Conformational flexibility of bacterial RNA polymerase.

scientific article

Conformations of variably linked chimeric proteins evaluated by synchrotron X-ray small-angle scattering.

scientific article published in December 2004

Conserved Intramolecular Interactions Maintain Myosin Interacting-Heads Motifs Explaining Tarantula Muscle Super-Relaxed State Structural Basis

scientific article published on 2 February 2016

Control of protein functional dynamics by peptide linkers.

scientific article

Conventions and workflows for using Situs

scientific article (publication date: April 2012)

Correction of Missing-Wedge Artifacts in Filamentous Tomograms by Template-Based Constrained Deconvolution

scientific article published on 19 March 2020

Cross-linking constraints on F-actin structure.

scientific article published on June 2000

Developing a denoising filter for electron microscopy and tomography data in the cloud.

scientific article

Direct observation of counterion organization in F-actin polyelectrolyte bundles.

scientific article published in April 2005

Domain motions of EF-G bound to the 70S ribosome: insights from a hand-shaking between multi-resolution structures

scientific article

Entropic folding pathway of human epidermal growth factor explored by disulfide scrambling and amplified collective motion simulations

scientific article published on 30 November 2006

Evolutionary bidirectional expansion for the tracing of alpha helices in cryo-electron microscopy reconstructions.

scientific article published on 6 December 2011

Exploring global distortions of biological macromolecules and assemblies from low-resolution structural information and elastic network theory.

scientific article published on August 2002

Faces of Contemporary CryoEM Information and Modeling

scientific article published on 01 May 2020

Fast rotational matching of rigid bodies by fast Fourier transform acceleration of five degrees of freedom

scientific article published on 23 July 2003

Frontiers in CryoEM Modeling

scientific article published on 13 June 2019

His(73), often methylated, is an important structural determinant for actin. A mutagenic analysis of HIS(73) of yeast actin

scientific article published on 01 December 1999

Interactive fitting augmented by force-feedback and virtual reality.

scientific article published in October 2003

Investigating a back door mechanism of actin phosphate release by steered molecular dynamics

scientific article published on 01 May 1999

Kinesin has three nucleotide-dependent conformations. Implications for strain-dependent release

scientific article published on 01 November 2000

Like-charge attraction between polyelectrolytes induced by counterion charge density waves

scientific article

Limulus polyphemus hemocyanin: 10 A cryo-EM structure, sequence analysis, molecular modelling and rigid-body fitting reveal the interfaces between the eight hexamers.

scientific article published on December 2006

Local feature analysis: a statistical theory for reproducible essential dynamics of large macromolecules

scientific article published on 01 August 2006

Matching structural densities from different biophysical origins with gain and bias.

scientific article published on 18 September 2010

Mega-Dalton Biomolecular Motion Captured from Electron Microscopy Reconstructions

scientific article published on 01 February 2003

Modeling Tricks and Fitting Techniques for Multiresolution Structures

article

Multi-resolution anchor-point registration of biomolecular assemblies and their components.

scientific article published on 25 August 2006

Multi-resolution contour-based fitting of macromolecular structures

scientific article published on 01 March 2002

Multi-scale Visualization of Molecular Architecture Using Real-Time Ambient Occlusion in Sculptor

scientific article published on 27 October 2015

Nucleotide-dependent movements of the kinesin motor domain predicted by simulated annealing.

scientific article

Numerical geometry of map and model assessment.

scientific article

Outcome of the first electron microscopy validation task force meeting

scientific article (publication date: 8 February 2012)

Protein domain movements: detection of rigid domains and visualization of hinges in comparisons of atomic coordinates ⬇️

scientific article published on September 1, 1997

Regulation of yeast actin behavior by interaction of charged residues across the interdomain cleft.

scientific article

Self-organizing neural networks bridge the biomolecular resolution gap.

scientific article

Situs: A package for docking crystal structures into low-resolution maps from electron microscopy

scientific article (publication date: 1999)

Spanning the length scales of biomolecular simulation

scientific article published on 01 January 2004

Spatial Heat Maps from Fast Information Matching of Fast and Slow Degrees of Freedom: Application to Molecular Dynamics Simulations

scientific article

Stability and dynamics of G-actin: back-door water diffusion and behavior of a subdomain 3/4 loop ⬇️

scientific article published on August 1, 1997

Structure and dynamics of calmodulin in solution.

scientific article

Three-Dimensional Reconstruction of Tarantula Myosin Filaments Suggests How Phosphorylation May Regulate Myosin Activity

scientific article

Tracing Actin Filament Bundles in Three-Dimensional Electron Tomography Density Maps of Hair Cell Stereocilia.

scientific article published on 11 April 2018

Using Sculptor and Situs for simultaneous assembly of atomic components into low-resolution shapes

scientific article

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