Search filters

List of works by Aleksey Penin

A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling

scientific article

A sustained deficiency of mitochondrial respiratory complex III induces an apoptotic cell death through the p53-mediated inhibition of pro-survival activities of the activating transcription factor 4.

scientific article

Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains

scientific article

An update to database TraVA: organ-specific cold stress response in Arabidopsis thaliana

scientific article published on 15 February 2019

Architectural proteins Pita, Zw5,and ZIPIC contain homodimerization domain and support specific long-range interactions in Drosophila

scientific article published on 02 May 2016

Comparative Analysis of Developmental Transcriptome Maps of Arabidopsis thaliana and Solanum lycopersicum

article

Comparative analysis of gene expression level by quantitative real-time PCR has limited application in objects with different morphology

scientific article

Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives.

scientific article published on 25 July 2016

Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale -a wild ancestor of cultivated buckwheat

scientific article

Comparative genome analysis of Pseudogymnoascus spp. reveals primarily clonal evolution with small genome fragments exchanged between lineages

scientific article published on 21 May 2015

Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge

scientific article

Complete Plastid Genome of the Recent Holoparasite Lathraea squamaria Reveals Earliest Stages of Plastome Reduction in Orobanchaceae.

scientific article

Cooption of heat shock regulatory system for anhydrobiosis in the sleeping chironomid Polypedilum vanderplanki

scientific article published on 20 February 2018

Correlation between number and position of floral organs in Arabidopsis ⬇️

scientific article published on July 1, 2011

Crossing-over in a hypervariable species preferentially occurs in regions of high local similarity

scientific article published on 18 August 2014

De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum).

scientific article

Effect of method of deduplication on estimation of differential gene expression using RNA-seq

scientific article published on 16 March 2017

Evolution of the Genome 3D Organization: Comparison of Fused and Segregated Globin Gene Clusters

scientific article

Exploring the limits for reduction of plastid genomes: a case study of the mycoheterotrophic orchids Epipogium aphyllum and Epipogium roseum.

scientific article

Extraordinary Genetic Diversity in a Wood Decay Mushroom

scientific article

FACS Isolation of Viable Cells in Different Cell Cycle Stages from Asynchronous Culture for RNA Sequencing

scientific article published in January 2018

Fast evolution from precast bricks: genomics of young freshwater populations of threespine stickleback Gasterosteus aculeatus.

scientific article

Genome Characterization of a Pathogenic Porcine Rotavirus B Strain Identified in Buryat Republic, Russia in 2015

scientific article published on 20 April 2018

High-quality genome assembly of Capsella bursa-pastoris reveals asymmetry of regulatory elements at early stages of polyploid genome evolution.

scientific article published on 7 April 2017

Interplay between RNA interference and heat shock response systems in Drosophila melanogaster.

scientific article published on October 2016

Mitochondrial Genomes of Kinorhyncha: trnM Duplication and New Gene Orders within Animals

scientific article

Paratrypanosoma Is a Novel Early-Branching Trypanosomatid

scientific article (publication date: September 2013)

Phylogeny of flowering plants by the chloroplast genome sequences: in search of a "lucky gene"

scientific article published on 01 December 2007

RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation

scientific article

RNA-seq highlights parallel and contrasting patterns in the evolution of the nuclear genome of fully mycoheterotrophic plants

article

Selection and Validation of Reference Genes for Quantitative Real-Time PCR in Buckwheat (Fagopyrum esculentum) Based on Transcriptome Sequence Data ⬇️

scientific article published on May 12, 2011

Sequencing and analysis of plastid genome in mycoheterotrophic orchid Neottia nidus-avis.

scientific article

The Genome of Intoshia linei Affirms Orthonectids as Highly Simplified Spiralians.

scientific article published on 28 June 2016

The LEPIDIUM-LIKE gene determines stem cell activity during formation of petals and stamens in Arabidopsis thaliana flowers

scientific article published on 01 January 2007

The clustering of CpG islands may constitute an important determinant of the 3D organization of interphase chromosomes.

scientific article published on 15 April 2014

The genome of the toxic invasive species <i>Heracleum sosnowskyi</i> carries an increased number of genes despite absence of recent whole‐genome duplications

scientific article published in 2023

The plastid genome of mycoheterotrophic monocot Petrosavia stellaris exhibits both gene losses and multiple rearrangements

scientific article

Transcriptome profile of yeast reveals the essential role of PMA2 and uncharacterized gene YBR056W-A (MNC1) in adaptation to toxic manganese concentration.

scientific article

Transcriptome-based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection

scientific article

Translatome and transcriptome analysis of TMA20 (MCT-1) and TMA64 (eIF2D) knockout yeast strains

scientific article published on 02 February 2019

Whole transcriptome profiling of adult and infective stages of the trematode Opisthorchis felineus

scientific article published on 09 September 2015

Paulina is supported by:

About Paulina

Help