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List of works by Michal Marczyk

Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition

scientific article published on March 20, 2013

An Efficient Algorithm for Microarray Probes Re-annotation

article published in 2014

BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm

article

Comparison of Algorithms for Profile-Based Alignment of Low Resolution MALDI-ToF Spectra

scholarly article by Michal Marczyk et al published 2014 in Advances in Intelligent Systems and Computing

Comparison of peptide cancer signatures identified by mass spectrometry in serum of patients with head and neck, lung and colorectal cancers: Association with tumor progression

scientific article published on 05 September 2011

Efficient Algorithm for Microarray Probes Re-annotation

GaMRed-Adaptive Filtering of High-Throughput Biological Data

scientific article published on 23 July 2018

Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms

scientific article published on 01 December 2019

Germline variant burden in cancer genes correlates with age at diagnosis and somatic mutation burden

scientific article published on 15 May 2020

Improving peak detection by Gaussian mixture modeling of mass spectral signal

scientific article published in September 2017

Influence of genetic background and oxidative stress response on risk of mandibular osteoradionecrosis after radiotherapy of head and neck cancer

Initializing the EM Algorithm for Univariate Gaussian, Multi-Component, Heteroscedastic Mixture Models by Dynamic Programming Partitions

Least Squares Estimators of Peptide Species Concentrations Based on Gaussian Mixture Decompositions of Protein Mass Spectra

article by Andrzej Polanski et al published 2015 in Springer Proceedings in Mathematics & Statistics

Modeling of Imaging Mass Spectrometry Data and Testing by Permutation for Biomarkers Discovery in Tissues

Molecular Profiling for Predictors of Radiosensitivity in Patients with Breast or Head-and-Neck Cancer

scientific article published on 22 March 2020

Multi-Omics Investigation of Innate Navitoclax Resistance in Triple-Negative Breast Cancer Cells

scientific article published on 08 September 2020

Quantifying Spatial Heterogeneity of Tumor-Infiltrating Lymphocytes to Predict Survival of Individual Cancer Patients

scientific article published on 7 July 2022

Radiation-induced changes in levels of selected proteins in peripheral blood serum of breast cancer patients as a potential triage biodosimeter for large-scale radiological emergencies

scientific article published on December 2014

Radiation-induced changes in serum lipidome of head and neck cancer patients

scientific article

Radiation-related changes in serum proteome profiles detected by mass spectrometry in blood of patients treated with radiotherapy due to larynx cancer.

scientific article

Ranking metrics in gene set enrichment analysis: do they matter?

scientific article

Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis

article

Sensitivity, Specificity and Prioritization of Gene Set Analysis When Applying Different Ranking Metrics

article

Serum mass profile signature as a biomarker of early lung cancer.

scientific article published on 16 June 2016

Signal Partitioning Algorithm for Highly Efficient Gaussian Mixture Modeling in Mass Spectrometry

scientific article published on 31 July 2015

Sources of high variance between probe signals in Affymetrix short oligonucleotide microarrays

scientific article published on 31 December 2013

Stage I non-small-cell lung cancer: long-term results of lobectomy versus sublobar resection from the Polish National Lung Cancer Registry.

scientific article published on 11 April 2017

Treatment scheduling effects on the evolution of drug resistance in heterogeneous cancer cell populations

scientific article published on 26 May 2021