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List of works by Rezarta Islamaj Dogan

A Textual Representation Scheme for Identifying Clinical Relationships in Patient Records ⬇️

scientific article published on 01 February 2011

A context-blocks model for identifying clinical relationships in patient records ⬇️

scientific article published on June 9, 2011

Author keywords in biomedical journal articles

scientific article

Author name disambiguation for PubMed

scientific article

BioC implementations in Go, Perl, Python and Ruby

scientific article

BioC interoperability track overview

scientific article

BioC: a minimalist approach to interoperability for biomedical text processing

scientific article

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.

scientific article published in September 2016

Click-words: learning to predict document keywords from a user perspective ⬇️

scientific article published on November 1, 2010

Crowdsourcing and curation: perspectives from biology and natural language processing

scientific article

DNorm: disease name normalization with pairwise learning to rank

scientific article published on 21 August 2013

Extracting Rx information from clinical narrative ⬇️

scientific article published on September 1, 2010

Features generated for computational splice-site prediction correspond to functional elements

scientific article

Finding abbreviations in biomedical literature: three BioC-compatible modules and four BioC-formatted corpora

scientific article

NCBI disease corpus: a resource for disease name recognition and concept normalization

scientific article (publication date: February 2014)

NLM-Chem, a new resource for chemical entity recognition in PubMed full text literature

scientific article published on 25 March 2021

Natural language processing pipelines to annotate BioC collections with an application to the NCBI disease corpus

scientific article

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine

PDC - a probabilistic distributional clustering algorithm: a case study on suicide articles in PubMed

scientific article published on 30 May 2020

PMC text mining subset in BioC: about three million full-text articles and growing

scientific article published on 01 September 2019

PubMed Text Similarity Model and its application to curation efforts in the Conserved Domain Database

scientific article published on 01 January 2019

Reports on the 2012 AAAI Fall Symposium Series

Semi-automatic semantic annotation of PubMed queries: A study on quality, efficiency, satisfaction ⬇️

scientific article published on November 20, 2010

SplicePort--an interactive splice-site analysis tool

scientific article published on 18 June 2007

Structural footprinting in protein structure comparison: the impact of structural fragments.

scientific article

TeamTat: a collaborative text annotation tool

scientific article published on 08 May 2020

The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions

scientific article

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text

scientific article

Topics in machine learning for biomedical literature analysis and text retrieval

scientific article published on 05 October 2012

Topics in machine learning for biomedical literature analysis and text retrieval.

scientific article

Understanding PubMed user search behavior through log analysis

scientific article (publication date: 2009)

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